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Fix cmake policy warning
2019-01-18
M
.
Eric Irrgang
R
emove
.
trav
i
s
.
yml T
r
avis-CI
c
o
n
fig
f
ile
.
commit
|
commitdiff
|
tree
2018-12-19
M
.
E
ric Irrgang
Rest
r
i
ct
number of OpenMP threads during t
e
s
t
i
n
g
.
commit
|
commitdiff
|
tree
2018-11-20
M
.
Er
i
c
Irrgang
Bu
m
p gmx
a
pi version
number fo
r
2020 d
e
velopmen
t
cycl
e
.
commit
|
commitdiff
|
tree
2018-11-16
M
.
Eric
Irrgan
g
Expand gmxapi testing
to include t
h
read-M
P
I
.
commit
|
commitdiff
|
tree
2018-11-16
M
.
Eric
Irrga
n
g
C
onvert u
n
helpful assertion to
bet
t
er docu
m
entation
.
commit
|
commitdiff
|
tree
2018-11-16
M
.
Eric Irrgang
Re
m
ove extraneous CMake con
f
i
g
.
commit
|
commitdiff
|
tree
2018-11-15
M
.
Eric Irrgang
No
t
e
G
MX_ENAB
L
E_
C
CACHE in build
s
yste
m
docs
.
commit
|
commitdiff
|
tree
2018-11-14
M
.
Eric Irr
g
ang
Note G
M
XAPI C
M
ake variables a
n
d build tar
g
e
t
s
.
commit
|
commitdiff
|
tree
2018-11-01
M
.
Eri
c
I
r
rgang
Fu
l
ly de
f
i
ne sym
b
o
l
s i
n
restraintpotent
i
al
.
h
commit
|
commitdiff
|
tree
2018-11-01
M
.
Eric Irrgang
Add
m
i
ssing blame for res
t
raint module f
i
les
.
commit
|
commitdiff
|
tree
2018-10-19
M
.
E
ric Irrgang
Doc
u
mentat
i
on
bu
g
in
gmxapi/c
o
ntex
t
.
h
commit
|
commitdiff
|
tree
2018-10-15
M
.
Eric Ir
r
gan
g
Release notes
f
or
restraint
module an
d
gmxapi
.
commit
|
commitdiff
|
tree
2018-10-15
M
.
Eric Ir
r
gan
g
Ignore pyenv config file
.
commit
|
commitdiff
|
tree
2018-10-15
M
.
Eric Ir
r
gan
g
Pre
p
a
r
at
i
o
n
f
or de-duplic
a
ting mdrun
s
et
u
p
commit
|
commitdiff
|
tree
2018-10-14
M
.
Eric I
r
rgang
Add som
e
"to
d
o
"s for MDModules and
Impl
.
commit
|
commitdiff
|
tree
2018-10-14
M
.
Eric
I
rrg
a
ng
Resolve some linte
r
w
a
rnings
.
commit
|
commitdiff
|
tree
2018-10-14
M
.
Eric I
r
rga
n
g
Test signali
n
g
f
a
c
i
lity
t
hr
o
ugh session
res
o
u
r
ces
.
commit
|
commitdiff
|
tree
2018-10-14
M
.
Eric Irrgang
Clean up gm
x
ap
i
testsupport o
u
tput
.
commit
|
commitdiff
|
tree
2018-10-14
M
.
Eric
Irrgang
gmxapi
:
:UsageErr
o
r
commit
|
commitdiff
|
tree
2018-10-14
M
.
Eric Irrgang
Allow API ac
c
ess to simula
t
ion signals
.
commit
|
commitdiff
|
tree
2018-10-12
M
.
Eric Irrg
a
ng
Add gmxap
i
session resources
.
commit
|
commitdiff
|
tree
2018-10-12
M
.
Eric Irrga
n
g
E
n
able restra
i
nts
f
acilit
i
e
s
.
commit
|
commitdiff
|
tree
2018-10-12
M
.
E
r
i
c
Irrgang
Add A
P
I fo
r
adding MDModules / R
e
st
r
aints
.
commit
|
commitdiff
|
tree
2018-10-12
M
.
E
ric Irr
g
a
n
g
Initia
l
ize for
c
e vector i
n
P
o
te
n
tialPointData constructor
.
commit
|
commitdiff
|
tree
2018-10-12
M
.
Eric Irr
g
ang
Add restraints framework
.
commit
|
commitdiff
|
tree
2018-10-11
M
.
Eric Irrgang
Add
gmxapi::Workflow
.
commit
|
commitdiff
|
tree
2018-10-11
M
.
Eric I
r
r
g
ang
Add gmxapi::
S
e
ssion
.
commit
|
commitdiff
|
tree
2018-10-10
M
.
Eric Ir
r
gang
gmxapi ex
p
e
c
ts positio
n
independent cod
e
.
commit
|
commitdiff
|
tree
2018-10-05
M
.
Er
i
c
I
r
r
ga
n
g
Add gmxap
i
::S
y
stem
.
commit
|
commitdiff
|
tree
2018-10-03
M
.
Eric Irrgang
Add gmxapi::Context
.
commit
|
commitdiff
|
tree
2018-10-03
M
.
Eric Irrg
a
ng
C
o
m
bine private sectio
n
s of
M
drunner definition
.
commit
|
commitdiff
|
tree
2018-10-03
M
.
Eric Irrgan
g
Move mdr
u
n ma
i
nFunction to client c
o
de
.
commit
|
commitdiff
|
tree
2018-10-03
M
.
Eric I
r
rgang
Add test data
f
or gmxapi
.
commit
|
commitdiff
|
tree
2018-10-03
M
.
Eric Irrgan
g
Add
g
m
xa
p
i exceptio
n
s
.
commit
|
commitdiff
|
tree
2018-10-02
M
.
Eric
I
r
r
g
a
ng
A
dd gmxapi::Statu
s
.
commit
|
commitdiff
|
tree
2018-09-25
M
.
Eric Irrga
n
g
All
o
w expli
c
it r
e
s
e
t of si
m
ulation stop condition
.
commit
|
commitdiff
|
tree
2018-09-24
M
.
Eric Irrgang
F
i
x
gmxapi::Version test regression
.
commit
|
commitdiff
|
tree
2018-09-23
M
.
Eric Irrgang
A
d
d
gmxa
p
i::
M
D
Modu
l
e
.
commit
|
commitdiff
|
tree
2018-09-19
M
.
Eric Irrgang
Ch
a
nge names
of gmxapi::Vers
i
on functions
.
commit
|
commitdiff
|
tree
2018-09-17
M
.
Eric
Irrg
a
ng
Framework in
w
hich to build gmxapi
.
commit
|
commitdiff
|
tree
2018-09-14
M
.
Eric Irrgang
Rearrange mdrun/runner
.
h
commit
|
commitdiff
|
tree
2018-09-12
M
.
E
ri
c
Irrgang
S
implify
add_suffi
x
_to_output_
n
ames()
commit
|
commitdiff
|
tree
2018-09-10
M
.
Eric Ir
r
g
a
ng
Remove co
n
st f
r
om
poin
t
ers i
n
t_file
n
m
.
commit
|
commitdiff
|
tree
2018-09-05
M
.
Eric Irrgan
g
Adjust l
o
ader path resol
u
tion on Mac OS X
.
commit
|
commitdiff
|
tree
2018-08-29
M
.
Eric
I
r
r
gang
A
l
low exten
s
ible MDModules an
d
forceProviders
.
commit
|
commitdiff
|
tree
2018-08-08
M
.
Eric Irrgang
Enable ccache
compiler wrapper when availabl
e
.
commit
|
commitdiff
|
tree
2018-08-07
M
.
Eric
I
rrg
a
ng
Ad
d
som
e
de
v
eloper hel
p
t
o D
e
velope
r
Gu
i
de
.
commit
|
commitdiff
|
tree
2018-08-01
M
.
E
ric Irrgang
R
e
move extr
a
neous giti
g
n
or
e
line
.
commit
|
commitdiff
|
tree
2017-09-02
M
.
E
r
ic I
r
rg
a
n
g
Remove macro
that confuses some debuggers
commit
|
commitdiff
|
tree
2017-09-02
M
.
Eric Irrg
a
ng
make a box parameter const
commit
|
commitdiff
|
tree
2017-08-31
M
.
Eric Irr
g
a
n
g
Add more git i
g
nor
e
s
commit
|
commitdiff
|
tree
2017-08-30
M
.
Eric Irrgang
normalize s
o
me C header in
c
ludes
commit
|
commitdiff
|
tree
2017-08-30
M
.
E
ric Irrgang
small precau
t
ion in case
*
argc == 0
commit
|
commitdiff
|
tree
2017-08-30
M
.
Eric Irrgang
Decla
r
e an
input
p
a
rameter const
commit
|
commitdiff
|
tree
2017-07-27
M
.
Eri
c
Irrgang
Provide STL make_uniqu
e
t
empl
a
te functio
n
.
commit
|
commitdiff
|
tree
2017-06-30
M
.
Er
i
c Irrgang
Mar
k
unm
o
dif
i
e
d
i
nput p
a
rameter
a
s const
.
commit
|
commitdiff
|
tree
2017-06-29
M
.
Eric I
r
rgang
Mark unmodi
f
ied input paramet
e
r
c
onst
commit
|
commitdiff
|
tree
2017-04-22
M
.
E
ric I
r
rgang
igno
r
e OS X Fi
n
de
r
m
e
tadata
commit
|
commitdiff
|
tree
2017-04-22
M
.
E
ric Irrgan
g
sort
ignore
d
f
ile extension
s
commit
|
commitdiff
|
tree
2017-04-22
M
.
Er
i
c
Irrgang
ig
n
ore g++ precompi
l
er header
o
utpu
t
commit
|
commitdiff
|
tree
2017-03-17
M
.
Eric I
r
rgang
Add an extra ver
b
ose ta
r
get for docs
commit
|
commitdiff
|
tree
2016-12-15
M
.
E
r
ic
I
rrgang
F
i
x
syntax
in cma
k
e
s
t
atus messa
g
e
commit
|
commitdiff
|
tree