repo.or.cz
/
gromacs.git
/
search
commit
grep
author
committer
pickaxe
?
search:
re
summary
|
log
|
graphiclog1
|
graphiclog2
|
commit
|
commitdiff
|
tree
|
refs
|
edit
|
fork
first
·
prev
·
next
Renamed listed-forces to listed_forces
2019-01-21
Szilárd Pál
l
Add C
U
D
A
CC 7
.
5 (Turing) support with nvcc
commit
|
commitdiff
|
tree
2019-01-04
S
z
ilárd P
á
ll
Fix form
a
tti
n
g warning
commit
|
commitdiff
|
tree
2019-01-02
Szilárd Páll
Fix clang
6
w
a
rning
commit
|
commitdiff
|
tree
2019-01-02
Szilá
r
d Páll
Do not whitelist
the use of Ope
n
CL 1
.
1
API
commit
|
commitdiff
|
tree
2018-12-31
Szilárd Páll
F
i
x release notes typo
commit
|
commitdiff
|
tree
2018-12-31
Szilárd
P
á
ll
Add CUDA
CC 7
.
5 (Turing) suppo
r
t with nvcc
commit
|
commitdiff
|
tree
2018-12-27
Szilárd Páll
Us
e
std:
:
swap in LINCS
commit
|
commitdiff
|
tree
2018-12-22
Sz
i
l
á
r
d
Páll
Runtime chec
k
of d
e
vice O
p
en
C
L su
p
port
commit
|
commitdiff
|
tree
2018-12-21
Szilárd Páll
Make jenkins o
w
n
-
fftw verif
y
use loca
l
tarball
commit
|
commitdiff
|
tree
2018-12-20
S
z
i
lárd Pál
l
Fix
C
UDA compile
d
target-d
e
vice compati
b
ility check
commit
|
commitdiff
|
tree
2018-12-20
Szilárd Páll
Correct CUDA compatibi
l
ity check
commit
|
commitdiff
|
tree
2018-12-20
S
zilárd Páll
M
e
rge "Merge branch releas
e
-2018 into
release
-
2019
.
.
.
commit
|
commitdiff
|
tree
2018-12-18
Szilárd
P
ál
l
Merge
r
e
l
ease-20
1
9 bra
n
ch into master
commit
|
commitdiff
|
tree
2018-12-17
Sz
i
lárd Páll
Fi
x
GMX_BUILD_OWN_FFT
W
_URL CM
a
ke
c
ache
entry type
commit
|
commitdiff
|
tree
2018-12-14
Szil
á
rd Pál
l
Enable
ARMPL in the armclang build
commit
|
commitdiff
|
tree
2018-12-13
Szilárd P
á
ll
A
voi
d
s
p
uriou
s
timing
i
n bonded GPU launch subcounter
commit
|
commitdiff
|
tree
2018-12-13
Szilárd Páll
Doc
u
m
ent the
F
P exce
p
tion in cuFFT 7
.
0
commit
|
commitdiff
|
tree
2018-12-12
Szilárd Páll
Improve DLB report/note
commit
|
commitdiff
|
tree
2018-12-11
Szilárd Páll
Tweak the bond
e
d
GPU
e
n
ergy copy/wait operations
commit
|
commitdiff
|
tree
2018-12-06
Szil
á
rd P
á
ll
Add Bon
d
ed
GPU launch
ove
r
head cycle subcounter
commit
|
commitdiff
|
tree
2018-12-06
Szilá
r
d Páll
S
w
ap the order of
G
PU bonded and nonbond
e
d la
u
nc
h
commit
|
commitdiff
|
tree
2018-12-06
Szilárd Páll
Fix conditional i
n
n
o
nl
o
cal nb
n
xn GPU
work skippi
n
g
commit
|
commitdiff
|
tree
2018-12-06
Szilárd Páll
Split nbnxn
i
npu
t
c
o
p
y and
k
ernel l
a
unch
commit
|
commitdiff
|
tree
2018-12-05
Szilárd Páll
C
orrec
t
thread count i
n
the PME
G
PU reduction
commit
|
commitdiff
|
tree
2018-11-27
S
z
ilárd
Páll
Add A
R
MPL support
t
o
admin script
commit
|
commitdiff
|
tree
2018-11-27
S
zil
á
rd Pá
l
l
Add
tweaks
t
o supp
o
rt ARMPL for F
F
Ts
commit
|
commitdiff
|
tree
2018-11-07
Szilárd
P
á
ll
Re-enable the
a
r
mcl
a
ng
post-submit build
commit
|
commitdiff
|
tree
2018-11-07
Szilárd
P
á
ll
Eli
m
inate mac
r
o
that expands to variable in
P
ME GPU
commit
|
commitdiff
|
tree
2018-11-07
S
z
i
lárd Páll
Ensure
m
in
i
mum
exec width of the PME Open
C
L k
e
rnels
commit
|
commitdiff
|
tree
2018-10-14
Szilárd Páll
Fi
x
more clang
-
6 warnings i
n
CUDA cod
e
commit
|
commitdiff
|
tree
2018-10-14
Szilárd
P
áll
M
odernize
O
penCL
m
e
mory a
l
l
o
cation flags
commit
|
commitdiff
|
tree
2018-10-10
Szi
l
árd Páll
Swap cu
s
tom OpenCL mems
e
t
kernel for cl
E
nque
u
eFillBuf
f
er
commit
|
commitdiff
|
tree
2018-10-09
Szilárd Páll
Updat
e
re
g
re
s
s
i
o
n
t
e
st ref
t
o
d
ownload
commit
|
commitdiff
|
tree
2018-10-08
Szilárd Páll
Tweak FindFFTW API
c
hecks
commit
|
commitdiff
|
tree
2018-10-08
Szilárd Páll
Fix clan
g
-6 warnings
commit
|
commitdiff
|
tree
2018-10-08
S
z
ilárd Páll
Replace
some NU
L
L
w
ith nullptr in CUDA code
commit
|
commitdiff
|
tree
2018-10-07
Szilá
r
d Páll
U
s
e new GPU sl
a
ve for AMD
OpenCL verify runs
commit
|
commitdiff
|
tree
2018-10-05
Szilárd Pál
l
Updat
e
te
s
t matrices
w
i
th
n
ew GPU specifi
e
rs
commit
|
commitdiff
|
tree
2018-09-29
Szil
á
rd Pál
l
Fix c
o
nstrain
t
s cy
c
le count
i
ng
commit
|
commitdiff
|
tree
2018-09-21
Szilárd Páll
B
u
m
p
test timeout only for OpenCL
i
ntegration tes
t
s
commit
|
commitdiff
|
tree
2018-08-28
Szilárd
Páll
Quiet cmake abou
t
clFFT not found a
f
ter first
run
commit
|
commitdiff
|
tree
2018-08-21
Szilárd Páll
R
e
q
uest
flus
h
ing denorms
t
o zero in OpenCL
commit
|
commitdiff
|
tree
2018-08-20
Szilárd Páll
Disa
b
le sin
g
l
e compilati
o
n unit with CUD
A
9
.
0
commit
|
commitdiff
|
tree
2018-08-15
Szilárd Pál
l
Improve GPU detection sanity che
c
k
e
rror message
commit
|
commitdiff
|
tree
2018-07-30
Szilárd Páll
Move out OpenCL device utils
f
r
om vectype ops
commit
|
commitdiff
|
tree
2018-07-30
Szilárd Páll
Improve the robustn
e
ss of the nvcc CMake che
c
k
commit
|
commitdiff
|
tree
2018-07-30
Szilárd Páll
Fix nvcc hos
t
compiler check trig
g
e
ring
commit
|
commitdiff
|
tree
2018-07-29
Szilárd
P
á
l
l
C
o
rrect
i
ons to the u
s
er guide mdrun
p
erf section
commit
|
commitdiff
|
tree
2018-06-12
Szilá
r
d Páll
Also issue
OMP_NUM_TH
R
EAD
S
read
i
ng
n
o
te to the log
commit
|
commitdiff
|
tree
2018-06-04
S
z
ilárd Páll
Fix timing
o
f
c
l
F
FT ker
n
els
commit
|
commitdiff
|
tree
2018-05-29
Szilárd Páll
Switch to CU
D
A
9
.
2
+ gcc 7
commit
|
commitdiff
|
tree
2018-04-26
Szilárd Pál
l
Bump required CUDA vers
i
o
n
to 7
.
0
commit
|
commitdiff
|
tree
2018-04-23
S
zi
l
árd Páll
F
i
x icc wa
r
ning in post-s
u
bmit
commit
|
commitdiff
|
tree
2018-04-21
Szi
l
árd Páll
Add
p
o
st-su
b
mit with A
R
M
HPC To
o
lchain
commit
|
commitdiff
|
tree
2018-04-21
Szilár
d
Páll
Tweak PM
E
run mode
c
hecks
commit
|
commitdiff
|
tree
2018-04-20
Szilá
r
d
P
áll
Minor fix f
o
r pre-submit
ma
t
rix d
o
c
s
commit
|
commitdiff
|
tree
2018-04-19
Szilárd Páll
M
o
v
e
th
e
PME GPU c
l
earing
t
o
the end of the step
commit
|
commitdiff
|
tree
2018-04-16
Szilá
r
d
P
áll
A
dd
p
ost-sub
m
it test with hwloc
off
commit
|
commitdiff
|
tree
2018-04-13
Szi
l
árd
Páll
Use trivalu
e
option for
G
M
X
_HWL
O
C
commit
|
commitdiff
|
tree
2018-04-05
Szilárd Páll
Refactor cj preload in the nonb
o
nded OpenCL kernels
commit
|
commitdiff
|
tree
2018-03-29
Szilárd
P
áll
Tweak/e
n
able icc 18 post-sub
m
it t
e
sts
commit
|
commitdiff
|
tree
2018-03-29
Sz
i
lárd Páll
Switch CUDA 9
.
0/g
c
c
5 test to C
U
DA
9
.
1/gcc 6
commit
|
commitdiff
|
tree
2018-03-13
Sz
i
lárd Páll
Requi
r
e
O
p
enCL 1
.
2
commit
|
commitdiff
|
tree
2018-03-13
Szi
l
ár
d
Páll
Fix cl
a
n
g
6
.
0 with CUDA 9
.
0
commit
|
commitdiff
|
tree
2018-03-12
Szilár
d
Páll
Avoid icc-specific -ma
r
ch=core-avx2
f
lag w
i
th gcc
/
c
lan
g
commit
|
commitdiff
|
tree
2018-03-06
Szilárd
Páll
Ext
e
nd "Finding
out h
o
w to run mdrun better" section
commit
|
commitdiff
|
tree
2018-03-05
Szilárd Páll
Add
to the co
n
tributor section
commit
|
commitdiff
|
tree
2018-02-21
Szi
l
árd Páll
Switch pre-
s
u
bm
i
t C
U
DA 8
.
0
t
e
st to 9
.
0
commit
|
commitdiff
|
tree
2018-02-20
Szilárd P
á
ll
A
v
o
id aborting
mdrun whe
n
G
P
U sanity check
d
etects
.
.
.
commit
|
commitdiff
|
tree
2018-02-14
Szilár
d
Pá
l
l
R
emove bar
r
ier
s
p
reventing
t
exture
r
eference r
a
ces
commit
|
commitdiff
|
tree
2018-02-12
Szilárd Páll
Rem
o
ve single/m
u
lti compilation unit
s
witching lo
g
ic
commit
|
commitdiff
|
tree
2018-02-12
Szilárd Páll
Remove t
e
xture r
e
ference support in the CUD
A
commit
|
commitdiff
|
tree
2018-01-12
S
zilárd Páll
Call GPU profiler re
s
et on sep
a
ra
t
e
P
ME
ran
k
s
commit
|
commitdiff
|
tree
2018-01-10
Szil
á
rd Páll
User
g
u
i
de updates
t
o
GPU
sect
i
on
commit
|
commitdiff
|
tree
2018-01-10
Szilár
d
P
á
ll
Rele
a
se notes tweaks
commit
|
commitdiff
|
tree
2018-01-10
Szilárd Páll
Insta
l
l gu
i
de
u
pdates
commit
|
commitdiff
|
tree
2018-01-10
Sz
i
lá
r
d Pál
l
E
nvironment varia
b
le docs maintenance
commit
|
commitdiff
|
tree
2017-12-10
Szilá
r
d
Pá
l
l
Di
s
able default-
o
n NVML su
p
po
r
t i
n
C
Make
commit
|
commitdiff
|
tree
2017-12-06
S
z
i
lárd Páll
Implement alternating
G
PU wait
commit
|
commitdiff
|
tree
2017-11-28
Szilár
d
Páll
Separ
a
te
l
ocal
G
PU NB wait from e
m
ula
t
ion launch
commit
|
commitdiff
|
tree
2017-11-28
Szilárd Páll
Refa
c
tor GPU rollin
g
prune
l
aunc
h
commit
|
commitdiff
|
tree
2017-11-27
Szilárd
Pá
l
l
Time FFT/gat
h
e
r
in mix
e
d m
o
d
e
commit
|
commitdiff
|
tree
2017-11-24
Szilárd
Pál
l
A
dd GPU sharing post-submit
c
onfig
commit
|
commitdiff
|
tree
2017-11-23
Szilár
d
Páll
Move GP
U
FFT/gather
l
aunch a
f
t
e
r
GPU no
n
bon
d
eds
commit
|
commitdiff
|
tree
2017-11-07
Szilárd
P
áll
Use -mav
x
2
-
mfma ins
t
ead of -m
a
rch with
AVX2
commit
|
commitdiff
|
tree
2017-11-07
S
z
i
lár
d
Páll
Merge common nbnxn CUDA/Ope
n
CL G
P
U wait
c
ode-paths
commit
|
commitdiff
|
tree
2017-11-07
Szilárd Pá
l
l
Add wallcycle
timer for
t
he PME GPU
F
r
e
d
u
cti
o
n
commit
|
commitdiff
|
tree
2017-11-07
Szilárd
P
áll
S
p
l
it off nbnxn GPU timing and staging r
e
duction
commit
|
commitdiff
|
tree
2017-11-07
Szilárd Páll
De
d
uplica
t
e CUD
A
and Ope
n
CL timer struct
commit
|
commitdiff
|
tree
2017-10-31
Szilárd Páll
Fix nstlist
increase warning pri
n
t
commit
|
commitdiff
|
tree
2017-10-31
Szilárd Páll
Check CUDA a
v
ai
l
able/compiled code c
o
m
patibility
commit
|
commitdiff
|
tree
2017-10-31
Sz
i
lárd Pál
l
Fix nstlist incre
a
se warning pri
n
t
commit
|
commitdiff
|
tree
2017-10-26
Szil
á
rd Páll
R
e
organize
P
M
E GPU
laun
c
h
commit
|
commitdiff
|
tree
2017-10-23
Szilá
r
d
Páll
E
liminate some OCL/CUDA code
c
ode
dupl
i
c
a
tion
commit
|
commitdiff
|
tree
2017-10-19
Szi
l
árd Pá
l
l
Disa
b
l
e
O
penMP with clang 3
.
4 post-
s
ubmi
t
conf
i
g
commit
|
commitdiff
|
tree
2017-10-19
Szilárd Páll
Rem
o
v
e unised OpenCL debugging helpers
commit
|
commitdiff
|
tree
2017-10-12
Szilárd Páll
Remove the siz
e
_t from th
e
P
M
E
gath
e
r
C
U
D
A
kenels
commit
|
commitdiff
|
tree
2017-10-05
Szilárd Páll
R
e
f
actor scaled box
handling
f
or PME/Ewa
l
d
commit
|
commitdiff
|
tree
2017-10-05
Szilárd Páll
Fix pair list
a
r
ray assert
i
on
commit
|
commitdiff
|
tree
2017-10-05
Szilárd Páll
Av
o
id -Wmissing-prototypes
war
n
ings in clan
g
CU
D
A bu
i
lds
commit
|
commitdiff
|
tree
next