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Remove PImpl scaffolding from CUDA version of LINCS
2019-07-05
Artem Zhmurov
Remove P
I
mpl
s
caffolding from
CUDA version o
f
LINCS
commit
|
commitdiff
|
tree
2019-07-04
Artem
Zh
m
u
r
ov
Use r
e
allocateDeviceB
u
ffer
(
.
.
.
) in
C
UDA
v
ers
i
on of
.
.
.
commit
|
commitdiff
|
tree
2019-07-03
Artem Zhmurov
Early e
x
it for
C
UDA ver
s
ions
o
f SETTLE and
L
IN
C
S
commit
|
commitdiff
|
tree
2019-07-03
Artem Zhmurov
Memor
y
management fixes in
C
U
DA versi
o
n of LINCS
commit
|
commitdiff
|
tree
2019-06-28
Szil
á
rd Páll
Separa
t
e
C
PU
N
B kernel and buffer clearing subcount
e
rs
commit
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commitdiff
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tree
2019-06-28
M
a
gn
u
s Lundborg
Fused GPU bonded kernels
commit
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commitdiff
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tree
2019-06-18
Artem Zhmurov
C
ombine
C
UDA L
e
ap-Frog, LINCS and SET
T
LE
.
I
.
commit
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commitdiff
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tree
2019-05-24
Artem Zhmur
o
v
Clarify w
h
ich of the main energ
y
terms are prin
t
ed
.
commit
|
commitdiff
|
tree
2019-05-13
Pa
u
l Bauer
Fi
x
math formatting
in r
e
fere
n
ce m
a
nual
commit
|
commitdiff
|
tree
2019-05-12
A
rtem Z
h
murov
C
UDA versio
n
of Leap-Frog integra
t
o
r
with basic tes
t
s
commit
|
commitdiff
|
tree
2019-05-06
Mark A
b
raham
Im
p
r
ove how
mdrun -noappend name
s
output f
i
les
commit
|
commitdiff
|
tree
2019-05-02
Artem
Z
hmurov
Use
test with parameters fo
r
EnergyOutput
commit
|
commitdiff
|
tree
2019-04-30
Artem Zhmu
r
o
v
C
U
DA version o
f
SETTLE
a
lgorit
h
m
with basic
t
ests
commit
|
commitdiff
|
tree
2019-04-29
Artem Zh
m
u
rov
Fix for
t
he CUDA version of LINCS
commit
|
commitdiff
|
tree
2019-04-28
Artem Zhmurov
CUD
A
versio
n
of LINCS constraints
.
commit
|
commitdiff
|
tree
2019-04-04
Carsten
K
utzner
Early ex
i
t
f
r
o
m
mdrun
i
f group
s
cheme is detected in
.
.
.
commit
|
commitdiff
|
tree
2019-04-04
Artem
Z
hmurov
R
e
move isPressureC
o
upl
i
ngStep(
.
.
.
)
commit
|
commitdiff
|
tree
2019-04-04
Art
e
m Zhm
u
rov
Remove isTem
p
e
r
a
t
ureCou
p
li
n
gStep
(
.
.
.
)
commit
|
commitdiff
|
tree
2019-03-13
Artem
Z
hmu
r
o
v
Basic routines to hand
l
e
p
eriod
i
c b
o
u
n
d
a
ry
.
commit
|
commitdiff
|
tree
2019-02-19
Art
e
m
Zhmur
o
v
PBC set
u
p for
G
PU is m
o
ved into pbcut
i
ls
.
commit
|
commitdiff
|
tree
2019-02-13
Artem
Z
hmurov
Ignor
e
Visual Studio Cod
e
met
a
da
t
a
.
commit
|
commitdiff
|
tree