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Remove PImpl scaffolding from CUDA version of LINCS
2019-07-05
Ar
t
em Zh
m
urov
Remov
e
PImpl scaffolding from
CUDA vers
i
on
o
f
L
I
N
C
S
commit
|
commitdiff
|
tree
2019-07-04
Artem Zhmuro
v
Use
r
ealloc
a
t
e
DeviceBuffer(
.
.
.
) in CUDA version of
.
.
.
commit
|
commitdiff
|
tree
2019-07-03
A
r
tem Zhmur
o
v
Early
exi
t
for CUDA versions of SETTL
E
and LINCS
commit
|
commitdiff
|
tree
2019-07-03
A
r
t
em Zhmuro
v
Me
m
ory ma
n
ageme
n
t
f
ixes
in CUD
A
ver
s
ion o
f
LINCS
commit
|
commitdiff
|
tree
2019-07-03
Artem
Zhmurov
C
o
mbine CUDA L
e
ap
-
Frog,
L
INCS
a
nd SETT
L
E
.
II
.
commit
|
commitdiff
|
tree
2019-06-18
Artem Zhmurov
Combi
n
e C
U
DA Leap-F
r
o
g, LIN
C
S
a
nd SETTLE
.
I
.
commit
|
commitdiff
|
tree
2019-06-18
Artem Zhmuro
v
B
u
g fix: Co
n
straints te
s
ts a
r
e not
instantiat
e
d with
.
.
.
commit
|
commitdiff
|
tree
2019-05-24
Artem
Zhmu
r
o
v
Clarify which
o
f
the ma
i
n energy terms a
r
e printed
.
commit
|
commitdiff
|
tree
2019-05-24
Artem
Z
hmuro
v
C
l
arify the
E
n
e
rgyOutput III
commit
|
commitdiff
|
tree
2019-05-24
Artem Zhmurov
Clarify the En
e
rgyOutput II
commit
|
commitdiff
|
tree
2019-05-13
Artem Zhmurov
Clarify t
h
e
EnergyOut
p
ut I
commit
|
commitdiff
|
tree
2019-05-12
Ar
t
em
Zhmurov
CUDA version of Leap-Frog integrator
wit
h
basic
t
e
s
ts
commit
|
commitdiff
|
tree
2019-05-06
Ar
t
e
m
Zhmurov
Fixing minor memory issues in MD
L
ib
commit
|
commitdiff
|
tree
2019-05-02
Artem Zhmurov
U
s
e te
s
t with parameters
for
E
ne
r
gyOutput
commit
|
commitdiff
|
tree
2019-04-30
Artem Zhmuro
v
C
UD
A
version
o
f SETTLE algorithm with basic tests
commit
|
commitdiff
|
tree
2019-04-29
Arte
m
Zhmurov
Fix for the CUD
A
version of LINCS
commit
|
commitdiff
|
tree
2019-04-28
Artem Zhmurov
CUDA version of LINCS c
o
n
s
traint
s
.
commit
|
commitdiff
|
tree
2019-04-25
Artem Zh
m
u
rov
Imp
r
ovemen
t
s
f
o
r en
e
rgy output test
.
commit
|
commitdiff
|
tree
2019-04-16
Artem
Zhmurov
Fix for the memory access
e
r
ror in cons
t
r
a
ints tes
t
.
commit
|
commitdiff
|
tree
2019-04-04
Artem Zhmurov
Remo
v
e
is
P
ressureCoup
l
ingStep(
.
.
.
)
commit
|
commitdiff
|
tree
2019-04-04
Arte
m
Zhm
u
rov
R
emov
e
isTemperatureCou
p
ling
S
tep(
.
.
.
)
commit
|
commitdiff
|
tree
2019-03-28
Artem
Z
hmurov
GPU naming
c
onventions
commit
|
commitdiff
|
tree
2019-03-25
Art
e
m
Zhmuro
v
Remove unused headers
commit
|
commitdiff
|
tree
2019-03-13
Art
e
m
Z
hmurov
B
a
sic routines to
handle periodic boundary
.
commit
|
commitdiff
|
tree
2019-02-21
Artem
Z
h
mu
r
ov
Test for LINCS
an
d
SHAKE constra
i
n
t
s
.
commit
|
commitdiff
|
tree
2019-02-19
Artem Zhmur
o
v
PBC setup for G
P
U is moved in
t
o p
b
cutils
.
commit
|
commitdiff
|
tree
2019-02-13
Artem
Z
hmurov
I
gnor
e
Vis
u
al
S
tudio Co
d
e
m
etadata
.
commit
|
commitdiff
|
tree
2018-12-27
Artem Zhmurov
The tests for LINCS and SHAKE constraints
.
commit
|
commitdiff
|
tree