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Basic support for transforming KeyValueTrees
2016-08-27
Szilárd Páll
Make ASAN/T
S
AN/MSAN b
u
ild types easier
t
o discove
r
commit
|
commitdiff
|
tree
2016-07-08
Szilárd Páll
A
d
d P
D
F me
t
adata
to the manua
l
commit
|
commitdiff
|
tree
2016-07-08
Sz
i
l
á
rd Páll
User gu
i
de clar
i
ficat
i
o
ns
commit
|
commitdiff
|
tree
2016-07-07
Szilárd Páll
Add user gu
i
de info on CUD
A
application clocks
commit
|
commitdiff
|
tree
2016-07-05
Sz
i
l
ár
d
Páll
Document GMX_GPU
_
APPLICATI
O
N_CLOCKS
commit
|
commitdiff
|
tree
2016-07-04
Szilárd Páll
Disable NV
I
DIA JI
T
cache with OpenCL
commit
|
commitdiff
|
tree
2016-06-14
Szilárd Páll
Fix CUDA build
w
ith multiple compi
l
at
i
on units
commit
|
commitdiff
|
tree
2016-06-05
Szil
á
rd Pál
l
Add sup
p
ort f
o
r C
U
DA CC 6
.
0/6
.
1
commit
|
commitdiff
|
tree
2016-06-02
Szilárd P
á
ll
A
dd env
.
var
.
t
o enable OpenCL caching
commit
|
commitdiff
|
tree
2016-06-02
S
zilár
d
Páll
F
i
x OpenCL bi
n
a
ry ca
c
he file name genera
t
ion
commit
|
commitdiff
|
tree
2016-05-05
Szilárd Pál
l
Remove CUD
A
host compiler consiste
n
c
y checks
commit
|
commitdiff
|
tree
2016-04-28
Szilá
r
d
Páll
Worka
r
o
u
nd
f
or gcc false posi
t
ive warning
commit
|
commitdiff
|
tree
2016-04-27
Szilárd Páll
Fix
m
ultiple MPI ran
k
s per
n
ode
with Op
e
nCL
commit
|
commitdiff
|
tree
2016-04-26
Szilá
r
d Páll
Fix Op
e
nCL assertion
commit
|
commitdiff
|
tree
2016-04-19
Szilárd Pál
l
M
ove out CUDA profiler trigg
e
rs from NBNXN
commit
|
commitdiff
|
tree
2016-04-13
S
z
i
l
árd Páll
Spe
l
lin
g
fixes
commit
|
commitdiff
|
tree
2016-04-13
Szilárd Páll
Do not
c
r
e
a
t
e
e
mpty man/man7 direct
o
ry
commit
|
commitdiff
|
tree
2016-04-04
S
z
i
l
á
r
d
Páll
Mar
k
more variable
s
as adva
n
ced
commit
|
commitdiff
|
tree
2016-03-31
Sz
i
lárd Páll
re
f
actor CUDA t
e
x
ture-based table initialization
commit
|
commitdiff
|
tree
2016-03-31
S
zilárd P
á
ll
F
ix
multiple
t
MPI ranks per Ope
n
CL device
commit
|
commitdiff
|
tree
2016-03-30
Szilárd Páll
L
J combination
r
ul
e
ke
r
n
els for OpenCL
commit
|
commitdiff
|
tree
2016-03-30
Szilárd
P
áll
Re-enable i-
a
to
m
type lo
c
a
l
m
em prefetch in O
p
enCL
commit
|
commitdiff
|
tree
2016-03-30
S
zilárd Páll
Describe AMD APPSDK 3
.
0 issues
i
n
the guid
e
commit
|
commitdiff
|
tree
2016-03-17
S
z
i
lárd Pál
l
Fixed
O
p
enCL e/fshift clear kernel fi
r
s
t in
v
ocation
commit
|
commitdiff
|
tree
2016-02-26
Szilá
r
d Páll
Fix lef
t
o
ver load()
c
a
lls in the simd
u
t
i
l he
a
ders
commit
|
commitdiff
|
tree
2016-02-19
Sz
i
lárd Pá
l
l
Fi
x
Open
C
L table int
e
r
p
olation
s
of Ewald correction
commit
|
commitdiff
|
tree
2016-02-17
Szi
l
árd Páll
reintrod
u
ce
supercl in
t
eraction mask
c
onstant
commit
|
commitdiff
|
tree
2016-02-17
Szilá
r
d
P
áll
ch
a
nge macros to constants i
n
GPU code
commit
|
commitdiff
|
tree
2016-02-15
Szilárd Páll
Allow
G
MX_NB_
M
IN_CI=0 to be p
a
sse
d
commit
|
commitdiff
|
tree
2016-02-11
Sz
i
lárd Pá
l
l
Re-ena
b
l
e L
J
-PME + Lorentz-Be
r
t
h
e
lot on GP
U
s
commit
|
commitdiff
|
tree
2016-02-08
Szilárd Páll
Handle unifo
r
mly
GMX_OCL_NOGENCACHE
commit
|
commitdiff
|
tree
2016-01-26
Szilárd Pá
l
l
GPU co
d
e reo
r
ganizat
i
on and tweaks
commit
|
commitdiff
|
tree
2016-01-20
Szilárd
P
áll
Merge r
e
mote-tracki
n
g bra
n
ch
'
o
r
i
gin/release-5-1'
into
.
.
.
commit
|
commitdiff
|
tree
2016-01-09
Szilá
r
d Páll
s
plit NBNXN CUDA kernels int
o
four compilation units
commit
|
commitdiff
|
tree
2015-10-15
Szilárd Páll
Add CUDA nvcc >=7
.
0 sup
p
ort
commit
|
commitdiff
|
tree
2015-10-15
Szilárd Páll
Correct CUDA ve
r
sion com
p
arisons
commit
|
commitdiff
|
tree
2015-05-06
Szilárd
Páll
Merge
"Merge
release
-
4-6
i
nto release-5
-
0" into
r
e
lease-5-
0
commit
|
commitdiff
|
tree
2015-04-21
Szi
l
árd Páll
Allow
manually setting ta
r
get
G
PU arch
i
tect
u
res
commit
|
commitdiff
|
tree
2015-04-17
Szilárd Pál
l
defi
n
e CUD
A
versi
o
n and texobj sup
p
ort in config
.
h
commit
|
commitdiff
|
tree
2014-11-29
Szil
á
rd Pá
l
l
A
d
d ker
n
e
l
and compile
r
supor
t
for CC 3
.
7
d
evic
e
s
commit
|
commitdiff
|
tree
2014-11-17
Szilárd
P
ál
l
Allow increasing CUDA thr
e
a
d
block
s
ize
commit
|
commitdiff
|
tree
2014-11-17
S
zil
á
rd Páll
Add CUDA compile
r
suppor
t
f
or CC
5
.
0
commit
|
commitdiff
|
tree
2014-11-14
Szilárd Páll
Start nvprof profili
n
g
at counter reset
commit
|
commitdiff
|
tree
2014-09-26
Szilárd Pál
l
Fix incor
r
ect
a
sse
r
tion st
a
teme
n
t
commit
|
commitdiff
|
tree
2014-09-09
Szilárd
P
á
ll
Fix
malformed CUDA version macro check
commit
|
commitdiff
|
tree
2014-06-01
Szil
á
r
d P
á
ll
Add quote on th
e
kT-kj/
m
ol conve
r
si
o
n factor
commit
|
commitdiff
|
tree
2014-03-11
Szilárd Páll
B
ump required
CUDA version to 4
.
0
commit
|
commitdiff
|
tree
2014-01-28
Szilárd Páll
clarified OpenMP-related
things
i
n mdrun help/man
commit
|
commitdiff
|
tree
2013-11-19
Szilá
r
d
Páll
Fix DD loa
d
balancing bug
w
i
th GPU sh
a
ring
commit
|
commitdiff
|
tree
2013-05-30
Szi
l
árd Páll
fix
unnec
e
ssary switch to
pol
l
ing GPU wa
i
t
commit
|
commitdiff
|
tree
2013-02-10
Szilárd Páll
use lega
c
y
CUDA non-bonded
k
ernels only
on Fe
r
m
i
commit
|
commitdiff
|
tree
2013-01-18
Szi
l
árd Páll
fix Open
M
P
d
etection on Mac OS br
o
ken by a6fee0b
commit
|
commitdiff
|
tree
2013-01-17
S
zilárd Páll
a
d
d
ed m
i
ssing
c
leanup of some
n
b
n
xn_cud
a
data
commit
|
commitdiff
|
tree
2013-01-17
Szilárd Páll
Merge changes I930b316c,Ie
a
4283
e
0
,I103648
f
8 into release-4-6
commit
|
commitdiff
|
tree
2013-01-17
Szilárd Páll
use the compiler vers
i
on provided by CMake
>
=2
.
8
.
9
commit
|
commitdiff
|
tree
2013-01-17
Szilá
r
d Páll
note
the
r
eason for auto-disabling GPU support in CMak
e
commit
|
commitdiff
|
tree
2013-01-17
Szilár
d
Páll
clarify wording of GPU
d
river-related not
e
s
commit
|
commitdiff
|
tree
2013-01-15
Szilárd Páll
disable OpenMP with
all O
S
X gcc 4
.
2-b
a
sed compilers
commit
|
commitdiff
|
tree
2012-12-19
Szilárd P
á
ll
Merge "Avoid using undefined C
M
ake v
a
r
i
a
b
les" into
.
.
.
commit
|
commitdiff
|
tree
2012-12-19
Szilárd
P
áll
Merge "Removed o
r
phan file" into release-4-6
commit
|
commitdiff
|
tree
2012-12-17
Szilárd
P
áll
Merge
"reduced PL
I
N
CS comm
u
n
i
cation with H-bon
d
c
o
nstra
i
nts
.
.
.
commit
|
commitdiff
|
tree
2012-11-28
S
zilárd Páll
Merge changes
I
9
b865c4c,Ib709290e in
t
o
rele
a
s
e
-4-6
commit
|
commitdiff
|
tree
2012-11-23
Szilár
d
P
á
ll
Mer
g
e "Update
s
t
o
CMak
e
treatm
e
nt of OpenMP" in
t
o rele
a
se-4-6
commit
|
commitdiff
|
tree
2012-10-25
Szilá
r
d Páll
fi
x
false pos
i
tive g
c
c 4
.
7 warning in libxdr
f
commit
|
commitdiff
|
tree
2012-10-24
Szilárd Páll
enable GMX_PREFER_STATIC_
L
IBS CMake o
p
t
ion on M
a
c O
S
X
commit
|
commitdiff
|
tree
2012-07-03
S
zilárd Páll
Merge "Minor for
m
att
i
ng and consi
s
tenc
y
changes
to
.
.
.
commit
|
commitdiff
|
tree
2012-05-25
Szilárd
P
ál
l
Merge "Fix Cl
a
ng 3
.
1 compile error"
commit
|
commitdiff
|
tree
2012-04-26
Szilárd Páll
Merge "fi
x
ed initi
a
l COM mo
t
io
n
r
e
mov
a
l w
i
th mult
i
ple
.
.
.
commit
|
commitdiff
|
tree
2012-02-11
S
zi
l
árd
Pál
l
Merge changes If0c2f9d9,Ic2a8a
d
82 into release-4-5
.
.
.
commit
|
commitdiff
|
tree
2012-02-02
Sz
i
lár
d
Páll
Merge "Append all ICC Performan
c
e
f
lags on
l
y
t
o Rel
e
a
s
e
.
.
.
commit
|
commitdiff
|
tree
2012-02-02
Szilárd
Páll
Merge "Merges in threading b
r
anch as one squa
s
hed
commit
.
.
.
commit
|
commitdiff
|
tree
2011-10-06
Szilárd Páll
M
e
rge "Re
m
oved dupl
i
cat
e
CMake fun
c
t
ion
a
lity" i
n
to
.
.
.
commit
|
commitdiff
|
tree