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Remove useless extern CUDA texture reference declarations from PME
2017-10-12
Al
e
ksei I
u
p
i
nov
Re
m
ove useless ex
t
ern
CUDA
texture reference declarations
.
.
.
commit
|
commitdiff
|
tree
2017-10-12
Aleksei Iupinov
Rever
t
"
D
r
o
p
NB_ from GMX_CUDA_N
B
_SINGLE_COMPILATION_UNIT
.
.
.
commit
|
commitdiff
|
tree
2017-10-11
Aleks
e
i Iupi
n
o
v
Fix clang war
n
ings fo
r
PME CUDA kernels
commit
|
commitdiff
|
tree
2017-10-11
A
leksei
I
upinov
R
elax
PME solving test complex
g
r
i
d tolerance
commit
|
commitdiff
|
tree
2017-10-11
Aleksei Iu
p
inov
CUDA 9/Volta supp
o
rt for
P
ME
commit
|
commitdiff
|
tree
2017-10-11
Aleksei Iupinov
PME solvi
n
g - CUDA
k
ernel +
u
nit tests
commit
|
commitdiff
|
tree
2017-10-11
Aleksei Iupinov
PME force gathering - CUDA
kern
e
l +
u
nit tests
commit
|
commitdiff
|
tree
2017-10-11
Alek
s
ei Iupinov
Drop
N
B_
f
rom GM
X
_
C
U
DA_NB_SINGLE
_
CO
M
PILATION
_
UNIT
cmake
.
.
.
commit
|
commitdiff
|
tree
2017-10-11
Aleks
e
i Iupinov
PME spline+s
p
r
ead CUDA
kernel an
d
u
n
it
tests
commit
|
commitdiff
|
tree
2017-10-09
Aleksei Iupinov
Remove s
o
me unnecessary include
s
fro
m
P
ME
commit
|
commitdiff
|
tree
2017-10-09
Alek
s
e
i
Iupinov
P
M
E GPU/CUDA data framework
.
commit
|
commitdiff
|
tree
2017-10-06
Aleksei
I
upinov
A
dd timing accumulat
i
on
c
apability into Gpu
R
egionTimer
commit
|
commitdiff
|
tree
2017-10-04
Aleks
e
i
Iupinov
Re
m
ove G
P
U timing fun
c
t
i
o
ns
s
upers
e
ded by Gp
u
Regio
n
Timer
commit
|
commitdiff
|
tree
2017-10-04
Aleksei Iu
p
inov
Add GpuRegionTi
m
er class
commit
|
commitdiff
|
tree
2017-10-03
Alekse
i
Iupinov
Brin
g
CUDA texture g
e
t
t
ers docume
n
tatio
n
u
p
-to-da
t
e
commit
|
commitdiff
|
tree
2017-10-03
Aleks
e
i
I
u
p
i
nov
Tem
p
late/move
CU
D
A t
e
xt
u
re
c
leanu
p
c
o
de f
r
om NB CUDA
.
.
.
commit
|
commitdiff
|
tree
2017-10-03
A
leksei Iupinov
A
d
d W
i
nA
P
I page si
z
e
q
uery for
allocat
o
r p
u
r
pose
s
commit
|
commitdiff
|
tree
2017-09-26
Aleksei Iupinov
Move CU
D
A tex
t
u
re setup
c
ode from NB CUDA m
o
dule to
.
.
.
commit
|
commitdiff
|
tree
2017-09-22
Ale
k
sei Iupin
o
v
Template the
C
U
DA tex
t
ur
e
s
e
tup
c
ode on raw
v
alue
t
ype T
commit
|
commitdiff
|
tree
2017-09-21
Ale
k
sei Iupinov
Elim
i
nate u
n
used Coulomb c
o
rrection tabl
e
siz
e
cou
l
omb_tab_
s
ize
commit
|
commitdiff
|
tree
2017-09-21
A
l
eksei Iupinov
Eliminate duplicat
e
CUDA tex
t
ure
setup code
commit
|
commitdiff
|
tree
2017-09-18
Aleks
e
i
Iu
p
i
n
ov
Skip GPU reallocatio
n
of an empty non-
l
ocal pairlist
commit
|
commitdiff
|
tree
2017-09-14
A
l
e
k
sei
I
u
pinov
Fix non-S
I
MD build failing
commit
|
commitdiff
|
tree
2017-09-12
Aleksei I
u
p
i
nov
Prevent
reference X
M
L
re
a
der segfault on nul
l
p
t
r error
.
.
.
commit
|
commitdiff
|
tree
2017-09-04
Aleksei
Iupi
n
ov
M
erge "Merge branch release-
5
-1 into
r
elease-2016"
.
.
.
commit
|
commitdiff
|
tree
2017-08-31
A
l
eksei Iupinov
B
r
i
ng back spac
e
lost in com
m
it
e
4
3e83bf
commit
|
commitdiff
|
tree
2017-08-29
A
le
k
sei Iup
i
nov
Remove le
f
tover fun
c
tion de
c
laration
commit
|
commitdiff
|
tree
2017-08-29
Aleksei Iupinov
F
i
x
typo
commit
|
commitdiff
|
tree
2017-08-29
Alek
s
ei Iup
i
nov
Allow passing optional width
argume
n
t
i
nto CUDA shuffle
.
.
.
commit
|
commitdiff
|
tree
2017-08-29
Alek
s
ei Iupi
n
ov
Adjust
P
ME LJ sol
v
e
r
t
e
st input coefficient
commit
|
commitdiff
|
tree
2017-08-22
Alekse
i
Iup
i
nov
Separate
P
ME
s
pread and gather w
a
llcycl
e
counters
commit
|
commitdiff
|
tree
2017-08-21
Ale
k
s
ei Iupinov
PME solving tests
commit
|
commitdiff
|
tree
2017-08-17
Aleksei Iupinov
Merge "
M
erge br
a
nch release-5-1 into r
e
leas
e
-2016"
.
.
.
commit
|
commitdiff
|
tree
2017-06-30
Aleksei Iu
p
ino
v
Remove o
u
tdated cmake nv
c
c
logic
commit
|
commitdiff
|
tree
2017-06-12
Aleksei Iup
i
nov
Store a
p
h
y
s
ical node communicator in t_commrec
commit
|
commitdiff
|
tree
2017-03-17
Aleksei
Iupinov
F
ix der
e
f
e
rencing
n
ul
l
p
tr in
PM
E
solve w
o
rk destructor
commit
|
commitdiff
|
tree
2017-03-03
Aleksei Iupinov
Rem
o
ve ou
t
dated
CUDA ve
r
sion c
h
eck
commit
|
commitdiff
|
tree
2017-02-21
Aleksei Iupinov
Remove unuse
d
f
unct
i
on
cu_syn
c
hstream_atdat()
commit
|
commitdiff
|
tree
2017-02-09
Aleksei I
u
pino
v
Add
i
nitialization to dvd
l
ambda in bonded
f
orce
s
tests
commit
|
commitdiff
|
tree
2017-02-09
Ale
k
sei Iupinov
Fi
x
typo
(
D
ihedarl -> D
i
hedral)
commit
|
commitdiff
|
tree
2017-02-08
Aleks
e
i Iupinov
PME force gathe
r
ing test
s
commit
|
commitdiff
|
tree
2017-02-08
Alek
s
e
i Iu
p
in
o
v
Fix
inv
a
l
i
d tric
l
inic box
i
n
t
h
e P
M
E t
e
st data
commit
|
commitdiff
|
tree
2017-01-24
Aleksei Iupinov
PME
s
pline c
o
mpu
t
a
tion
a
n
d
c
h
arge
s
preading tests
commit
|
commitdiff
|
tree
2017-01-24
Aleksei Iupi
n
ov
A
dd const qualifier to s
o
me PME spread arguments
commit
|
commitdiff
|
tree
2017-01-19
Aleks
e
i Iup
i
n
o
v
Simplify
gm
x
_c
o
unt_gpu_d
e
v_unique()
commit
|
commitdiff
|
tree
2017-01-19
Aleksei
I
upin
o
v
PME B-S
p
l
i
ne moduli co
m
putation unit
test
commit
|
commitdiff
|
tree
2017-01-05
Aleksei I
u
pinov
Fix compilati
o
n w
i
th CMAKE_
C
XX_FLAGS="-Wall -
W
error
"
commit
|
commitdiff
|
tree
2016-12-22
Alek
s
ei Iupinov
R
emo
v
e unused
m
e
m
b
er t
h
read_
o
ne from t
h
e
PM
E
spline
.
.
.
commit
|
commitdiff
|
tree
2016-12-05
Al
e
ksei Iupinov
St
o
p i
n
cl
u
ding parall
e
l_3dfft
.
h
in headers
commit
|
commitdiff
|
tree
2016-12-01
Aleksei I
u
pinov
M
o
ve GPU a
s
s
i
gnment functions into a separate file
commit
|
commitdiff
|
tree
2016-11-21
A
leksei Iupi
n
ov
Move ha
r
dcoded PME grid
i
ndexin
g
const
a
nts into he
a
der
commit
|
commitdiff
|
tree
2016-11-01
Aleks
e
i
Iup
i
n
o
v
Remove imat
r
i
x type and relat
e
d unused/er
r
one
o
u
s
co
d
e
commit
|
commitdiff
|
tree
2016-10-24
Aleksei
I
upinov
T
r
eat CUDA files as C++ d
u
r
i
ng cpp
c
h
eck
commit
|
commitdiff
|
tree
2016-10-10
A
leksei Iupinov
Fix
t
rivial PME
m
emory l
e
ak
s
commit
|
commitdiff
|
tree
2016-09-15
Ale
k
sei I
u
pinov
Move the PME Ewald coeffi
c
ients to the PME
structure
commit
|
commitdiff
|
tree
2016-09-10
Aleks
e
i Iupinov
Fix PME dat
a
d
estructor not being ca
l
led
commit
|
commitdiff
|
tree