repo.or.cz
/
gromacs.git
/
search
commit
grep
author
committer
pickaxe
?
search:
re
summary
|
log
|
graphiclog1
|
graphiclog2
|
commit
|
commitdiff
|
tree
|
refs
|
edit
|
fork
first
·
prev
·
next
GROMACS 2019 third beta release
2018-11-22
P
au
l
Bau
e
r
GRO
M
ACS
2
019 third beta release
commit
|
commitdiff
|
tree
2018-11-21
Paul Bauer
M
e
rge branch release-201
8
into relea
s
e-2019
commit
|
commitdiff
|
tree
2018-11-16
M
.
Eric
I
rrgang
Expand gmxapi tes
t
ing to i
n
clu
d
e thread-MPI
.
commit
|
commitdiff
|
tree
2018-11-14
Mark
A
bra
h
am
M
o
re warning suppressions f
o
r Q
M
MM c
o
de
commit
|
commitdiff
|
tree
2018-11-14
M
.
Eric Irrgang
Note GMXAPI CMake var
i
a
bles and build targets
.
commit
|
commitdiff
|
tree
2018-11-12
Paul Bauer
Update to prepare for 2018
.
5 poin
t
releas
e
commit
|
commitdiff
|
tree
2018-11-12
Paul
Ba
u
er
Version
2018
.
4
commit
|
commitdiff
|
tree
2018-11-09
Mark Abraham
D
isable
d
FPE checking for
n
on-release buil
d
s
commit
|
commitdiff
|
tree
2018-11-06
P
au
l
Bauer
Prep
a
re for beta3
commit
|
commitdiff
|
tree
2018-11-06
P
aul Baue
r
GRO
M
ACS 2019 secon
d
be
t
a release
commit
|
commitdiff
|
tree
2018-11-05
Mark
Abraham
Remove sou
r
ce f
i
le with no content
commit
|
commitdiff
|
tree
2018-11-05
Pa
u
l B
a
uer
Fix non ascii
chara
c
ters in manual ref
e
ren
c
es
commit
|
commitdiff
|
tree
2018-11-05
Paul Bauer
Fix
formatting issu
e
commit
|
commitdiff
|
tree
2018-11-02
Mar
k
Abraham
Quiet u
n
us
e
d variable warning
s
commit
|
commitdiff
|
tree
2018-11-01
M
.
Eric Irrgang
Fully define symbols in restraintpotenti
a
l
.
h
commit
|
commitdiff
|
tree
2018-10-30
Mark Abraham
Updates to docs for OpenCL
support
commit
|
commitdiff
|
tree
2018-10-26
P
a
ul Bauer
Fix
l
i
n
k f
o
r
matt
i
ng in de
v
eloper manual
commit
|
commitdiff
|
tree
2018-10-26
P
au
l
Bauer
Update u
s
e
r
d
ocumentation o
v
ervie
w
commit
|
commitdiff
|
tree
2018-10-22
Paul
B
auer
Prep
a
re
for beta 2
commit
|
commitdiff
|
tree
2018-10-22
Paul Bauer
GROMACS 2019
f
irst beta release
commit
|
commitdiff
|
tree
2018-10-18
Paul Bau
e
r
Re
m
ove unused files in d
o
cs/manu
a
l
commit
|
commitdiff
|
tree
2018-10-18
P
aul Ba
u
e
r
Fix segmentatio
n
fault in gmx
helix
commit
|
commitdiff
|
tree
2018-10-15
M
.
Eric I
r
rgang
Prepa
r
at
i
on for de-duplicating mdrun setu
p
commit
|
commitdiff
|
tree
2018-10-14
M
.
Er
i
c
Irrgang
Add so
m
e
"to d
o
"s for MDMo
d
ules a
n
d Impl
.
commit
|
commitdiff
|
tree
2018-10-14
Mark A
b
r
aham
Fix com
p
iler warnings
commit
|
commitdiff
|
tree
2018-10-11
Mark
Abraham
Ope
n
m
d
run log f
i
le only once
commit
|
commitdiff
|
tree
2018-10-10
Paul
B
auer
Wrong name for report-methods t
o
ol
commit
|
commitdiff
|
tree
2018-10-10
Berk
Hess
Move
pull out
p
ut
f
u
nctions to output
.
cpp
commit
|
commitdiff
|
tree
2018-10-10
Berk Hess
Minor
r
efactoring in bonded th
r
eading
commit
|
commitdiff
|
tree
2018-10-04
Be
r
k
Hess
Add
note t
o
avoid c
o
n
stra
i
nts=all-b
o
nds
commit
|
commitdiff
|
tree
2018-10-03
Pau
l
B
au
e
r
Change accep
t
ab
l
e
p
recis
i
on in m
i
nimizer
test
commit
|
commitdiff
|
tree
2018-10-03
M
.
E
r
ic
Irr
g
ang
Co
m
bin
e
priv
a
te sections of
M
drunner defi
n
ition
.
commit
|
commitdiff
|
tree
2018-09-27
Ber
k
He
s
s
M
o
v
e
ma
x
ReferenceTemperatur
e
(
)
to inputrec
commit
|
commitdiff
|
tree
2018-09-27
Paul
Bauer
Add mindist output file
c
heck
commit
|
commitdiff
|
tree
2018-09-27
Ber
k
H
e
ss
Improve update group rad
i
i
commit
|
commitdiff
|
tree
2018-09-27
B
erk Hess
Reorganize RVec scal
i
ng f
u
nctions
commit
|
commitdiff
|
tree
2018-09-26
Berk H
e
ss
Support atom groups
i
n
nbnxn_s
e
arch
commit
|
commitdiff
|
tree
2018-09-21
Pascal
M
erz
M
a
ke CGLO_CHECK_NU
M
BER_
O
F_
B
ONDED_INTERACTIO
N
S re
q
uire
.
.
.
commit
|
commitdiff
|
tree
2018-09-20
Paul Bauer
Separate me
t
hods
t
o create localtop and t
_
to
p
ology
commit
|
commitdiff
|
tree
2018-09-19
M
.
Eric
Irrgang
Change names of gmxapi
:
:
Version
fu
n
c
t
ions
.
commit
|
commitdiff
|
tree
2018-09-19
Mark Abraham
Fix bug
w
ith
s
t
ate natom
s
in mem
b
ed
commit
|
commitdiff
|
tree
2018-09-14
Paul Bauer
Rem
o
ve LaTeX fi
l
e
writing f
r
om gmx check
commit
|
commitdiff
|
tree
2018-09-13
Mark Abrah
a
m
Elimin
a
te mai
n
.
h
commit
|
commitdiff
|
tree
2018-09-07
Mark Ab
r
a
h
a
m
Sep
a
r
a
te simulation
d
at
a
base used in tests
commit
|
commitdiff
|
tree
2018-09-05
M
.
Eric Irrga
n
g
Ad
j
ust loader
path re
s
o
l
uti
o
n on Mac OS X
.
commit
|
commitdiff
|
tree
2018-09-05
Ma
r
k Abr
a
ham
Be quie
t
er when failing
to detect GPUs
commit
|
commitdiff
|
tree
2018-09-05
Paul Bauer
I
mp
r
ove stabi
l
ity of parallel documen
t
ation build
commit
|
commitdiff
|
tree
2018-09-03
Pa
u
l
Bauer
Fix error in documen
t
ation bui
l
d
commit
|
commitdiff
|
tree
2018-09-03
Kevi
n
Boyd
Correct info in Berendsen
p
-coupl
i
n
g mdp opt
i
on
commit
|
commitdiff
|
tree
2018-09-03
Rolan
d
Schul
z
Reduce
d
up
l
ication in g
p
u_
u
ti
l
s
commit
|
commitdiff
|
tree
2018-08-28
P
a
ul B
a
uer
Fix docu
m
entatio
n
build
w
i
thout i
m
agemagick
commit
|
commitdiff
|
tree
2018-08-23
Paul Bauer
Upda
t
e to p
r
epare for 2018
.
4 point r
e
lease
commit
|
commitdiff
|
tree
2018-08-23
Paul
B
auer
Vers
i
on 2018
.
3
commit
|
commitdiff
|
tree
2018-08-22
M
a
r
k Abra
h
am
Permit PME on GPUs only for
dynamical i
n
tegrat
o
rs
commit
|
commitdiff
|
tree
2018-08-21
Be
r
k Hess
Ensur
e
d
o
mains are large eno
u
gh for atom motion
commit
|
commitdiff
|
tree
2018-08-01
Pa
u
l Bauer
Fix -skip option for
gmx rms
commit
|
commitdiff
|
tree
2018-07-24
Paul B
a
uer
Change m
a
nual section
on restarts w/o che
c
kpoint
commit
|
commitdiff
|
tree
2018-06-08
P
aul Ba
u
er
Fix g
m
x s
o
lvate with multiple
s
olvent mo
l
ecule types
commit
|
commitdiff
|
tree
2018-05-30
Paul Bauer
Disallow use o
f
empty
b
ox informati
o
n
in so
l
vent file
s
commit
|
commitdiff
|
tree
2018-04-26
Paul
Bauer
Spl
i
t up topolo
g
y
s
ecti
o
n in manual
commit
|
commitdiff
|
tree
2018-04-26
Paul Bauer
Split up algorithms ma
n
u
al page
commit
|
commitdiff
|
tree
2018-04-18
Paul
B
auer
R
emove o
b
sol
e
te variable
prec
gr
o
file output
commit
|
commitdiff
|
tree
2017-12-19
Pa
u
l Bauer
R
em
o
ve
d
-skip
option from gmx energy
commit
|
commitdiff
|
tree
2017-12-11
Paul Bauer
Fewer messages
when -c
p
i
file
is not
p
resent
commit
|
commitdiff
|
tree
2017-12-08
Paul Bauer
Add
i
nformation reg
a
rding x
l
c compiler
commit
|
commitdiff
|
tree