repo.or.cz
/
gromacs.git
/
search
commit
grep
author
committer
pickaxe
?
search:
re
summary
|
log
|
graphiclog1
|
graphiclog2
|
commit
|
commitdiff
|
tree
|
refs
|
edit
|
fork
first
·
prev
·
next
Improve awkward handling of GMX_CUDA_TARGET* help
2017-08-18
S
zi
l
árd
P
ál
l
Improv
e
awkward
handli
n
g o
f
GMX_CUDA_TA
R
G
E
T* help
commit
|
commitdiff
|
tree
2017-08-18
Szi
l
árd Pál
l
Add CUDA pr
u
n
i
ng kernels and la
u
nch/ti
m
ing logic
commit
|
commitdiff
|
tree
2017-07-27
S
z
ilárd Páll
Inform u
s
ers about the end of run DL
B
s
t
ate
commit
|
commitdiff
|
tree
2017-06-26
Sz
i
l
ár
d
Páll
Add AR
M
_
N
E
ON_ASIMD
po
s
t-s
u
bmit t
e
st
commit
|
commitdiff
|
tree
2017-06-21
Szilár
d
Pá
l
l
R
e
-enable lost DD warning + mi
n
or co
d
e modern
i
zat
i
on
commit
|
commitdiff
|
tree
2017-06-20
Szilár
d
Pá
l
l
Re-enable acci
d
entally lost DD wa
r
ning
commit
|
commitdiff
|
tree
2017-06-20
Szil
á
rd Páll
Refactor
i
ng + clarification of
DLB s
t
ate ha
n
dl
i
ng
commit
|
commitdiff
|
tree
2017-06-15
Szilárd Páll
Allo
w
disabl
i
ng the explicit use of CUDA textures
commit
|
commitdiff
|
tree
2017-06-07
Szilár
d
P
á
ll
Suppress sm_2x dep
r
eca
t
i
on warn
i
ng wi
t
h CUDA
8
.
0
commit
|
commitdiff
|
tree
2017-06-05
Szilárd
Páll
Add
CUDA
8
.
0 +
S
IMD pre
-
subm
i
t
test
commit
|
commitdiff
|
tree
2017-06-02
Szilárd Páll
Add ARM_NEON post-submit test
commit
|
commitdiff
|
tree
2017-05-29
Szil
á
rd Pál
l
Quotes are
c
ool, ty
p
o-free
o
n
e
s ar
e
eve
n
"cooler"
commit
|
commitdiff
|
tree
2017-05-23
Sz
i
lárd P
á
ll
A
dd
basic doxyg
e
n
for the Verlet non
b
onded module
commit
|
commitdiff
|
tree
2017-03-29
Szilárd Páll
Re
f
a
c
tor CUDA
k
ernel
use of
t
ables
commit
|
commitdiff
|
tree
2017-03-29
Szilá
r
d Páll
A
dd CUDA u
t
il funct
i
on for co
n
stant load
s
commit
|
commitdiff
|
tree
2017-03-25
Szilárd P
á
ll
Conditional
tweak i
n
t
h
e nonbonded
GPU kerne
l
s
commit
|
commitdiff
|
tree
2017-03-17
Szilá
r
d Páll
Allow bypassin
g
OpenCL device compatibility check
commit
|
commitdiff
|
tree
2017-03-16
Sz
i
lár
d
Páll
Pr
i
nt c
o
de of unknown OpenCL error
commit
|
commitdiff
|
tree
2017-03-09
S
zilá
r
d Páll
Fix mdrun h
a
nging upon exit with
sep PME ranks
commit
|
commitdiff
|
tree
2017-01-24
S
z
ilárd Pál
l
Remo
v
e unused
argum
e
nt in GPU kernels
commit
|
commitdiff
|
tree
2016-12-09
Szilárd Páll
Turn off hwloc support when stati
c
lib found
commit
|
commitdiff
|
tree
2016-11-17
S
zilárd Pál
l
Correct ker
n
el launch bound
s
for C
U
DA sm_60
commit
|
commitdiff
|
tree
2016-11-01
S
z
ilárd
P
áll
M
erge "M
e
r
g
e branch
release-
2
016"
commit
|
commitdiff
|
tree
2016-10-28
Szil
á
rd Páll
GP
U
-related ad
d
itions to
t
h
e
install
/
user
guide
commit
|
commitdiff
|
tree
2016-10-27
Szilár
d
Páll
Make -cl-fast-relaxed-math defau
l
t
commit
|
commitdiff
|
tree
2016-10-26
Szilárd Pá
l
l
A
dd
G
M
X
_DISA
B
LE_GP
U
_TIMIN
G
env
var
commit
|
commitdiff
|
tree
2016-10-09
Szi
l
árd
P
áll
C
o
r
r
ect kernel launch
boun
d
s for CUDA sm
_
60
commit
|
commitdiff
|
tree
2016-08-27
S
zilárd
Páll
Make ASAN/TSA
N
/
MSAN
bui
l
d types easier to discove
r
commit
|
commitdiff
|
tree
2016-07-08
Szil
á
rd Páll
Add
PDF
metada
t
a to
t
he
m
a
nual
commit
|
commitdiff
|
tree
2016-07-08
Szilárd Páll
Us
e
r
g
uide clarifications
commit
|
commitdiff
|
tree
2016-07-07
Szilárd Pál
l
Add user guide
i
nfo on
CUDA ap
p
lication clocks
commit
|
commitdiff
|
tree
2016-07-05
Szilá
r
d Páll
Document GMX_GPU_A
P
P
L
I
CATION_CLOCKS
commit
|
commitdiff
|
tree
2016-07-04
Szilárd Páll
Disable NVID
I
A JIT cache
wi
t
h OpenCL
commit
|
commitdiff
|
tree
2016-06-14
Szilárd Pál
l
F
i
x
C
UDA
build with multip
l
e co
m
pilation unit
s
commit
|
commitdiff
|
tree
2016-06-05
Sz
i
lárd Páll
Add supp
o
r
t for CU
D
A CC 6
.
0/6
.
1
commit
|
commitdiff
|
tree
2016-06-02
Szilárd Páll
A
d
d env
.
var
.
t
o enable OpenCL
c
aching
commit
|
commitdiff
|
tree
2016-06-02
Szilá
r
d Páll
Fix OpenCL bin
a
ry c
a
che file name g
e
ne
r
ation
commit
|
commitdiff
|
tree
2016-05-05
Szilá
r
d Páll
Remo
v
e C
U
DA host compiler c
o
n
sis
t
ency
c
hecks
commit
|
commitdiff
|
tree
2016-04-28
Szilárd
Pá
l
l
Worka
r
oun
d
f
o
r gcc fal
s
e positive warning
commit
|
commitdiff
|
tree
2016-04-27
Sz
i
lárd
Páll
F
i
x multip
l
e MP
I
ranks per
node
with
O
penCL
commit
|
commitdiff
|
tree
2016-04-26
Szilárd Páll
Fix O
p
enCL asse
r
t
i
o
n
commit
|
commitdiff
|
tree
2016-04-19
S
z
ilárd Páll
M
ove out CUDA profiler triggers from NBNXN
commit
|
commitdiff
|
tree
2016-04-13
Szil
á
r
d
Páll
S
p
e
l
li
n
g fixes
commit
|
commitdiff
|
tree
2016-04-13
Szilár
d
Pál
l
Do
n
ot
create empty man/man7 directory
commit
|
commitdiff
|
tree
2016-04-04
Szilárd P
á
ll
M
a
rk more variables as a
d
vance
d
commit
|
commitdiff
|
tree
2016-03-31
S
zilárd Páll
refactor CU
D
A texture
-
base
d
table ini
t
i
a
l
ization
commit
|
commitdiff
|
tree
2016-03-31
Szi
l
a
r
d Pall
avoid CPU o
v
e
r
su
b
s
criptio
n
wit
h
GPUs
commit
|
commitdiff
|
tree
2016-03-31
Szilárd Páll
F
i
x multi
p
l
e
t
MPI
r
anks per Open
C
L
d
evice
commit
|
commitdiff
|
tree
2016-03-30
Szi
l
árd Páll
LJ c
o
m
b
ination rule kernels for OpenCL
commit
|
commitdiff
|
tree
2016-03-30
Szilárd Páll
Re-enable i-atom type local
m
e
m
prefetch in OpenCL
commit
|
commitdiff
|
tree
2016-03-30
Szi
l
árd
P
á
l
l
D
e
scribe AMD
APPSDK 3
.
0 issues in the guide
commit
|
commitdiff
|
tree
2016-03-17
Szi
l
árd Páll
F
i
x
ed OpenCL e/fshift clea
r
kern
e
l first in
v
oc
a
t
ion
commit
|
commitdiff
|
tree
2016-02-26
Szilár
d
Páll
F
ix
l
eftover load() calls in the
simd util
h
ead
e
r
s
commit
|
commitdiff
|
tree
2016-02-19
Szilárd Pá
l
l
F
ix O
p
enCL ta
b
le inte
r
polations of Ewald correction
commit
|
commitdiff
|
tree
2016-02-17
Szi
l
árd Páll
re
i
ntroduce supercl interaction mask co
n
stan
t
commit
|
commitdiff
|
tree
2016-02-17
Szilár
d
Páll
change
mac
r
os
t
o constant
s
in GPU code
commit
|
commitdiff
|
tree
2016-02-15
S
z
ilárd Páll
A
l
l
o
w
G
M
X_NB_MIN_CI=0 t
o
be passed
commit
|
commitdiff
|
tree
2016-02-11
Szilárd
P
áll
Re-enable LJ-PME + Lorentz-Be
r
the
l
ot
o
n GPUs
commit
|
commitdiff
|
tree
2016-02-08
Szilárd Páll
Han
d
le unif
o
rmly GMX_O
C
L_NOGENCAC
H
E
commit
|
commitdiff
|
tree
2016-02-06
Szilard P
a
l
l
Use c
u
d
a
Lau
n
chKer
n
e
l
with CUDA 7
.
0
and later
commit
|
commitdiff
|
tree
2016-01-26
Szilár
d
Páll
GPU code reorganiza
t
ion and tweaks
commit
|
commitdiff
|
tree
2016-01-20
Szilárd Páll
Mer
g
e remote-t
r
a
c
king b
r
anch 'ori
g
in
/
r
e
lease-5-1'
in
t
o
.
.
.
commit
|
commitdiff
|
tree
2016-01-05
Szilard P
a
ll
remove du
p
licate macro
s
and enable Wundef in CUDA
commit
|
commitdiff
|
tree
2016-01-01
Szilard
Pall
Fix xlc+C
U
DA workaround
in gmxManageNvc
c
Co
n
f
i
g
commit
|
commitdiff
|
tree
2015-12-26
Szilard Pall
I
m
prove do
c
u
ment
a
tion on OpenCL i
s
sue w
i
th NVIDI
A
commit
|
commitdiff
|
tree
2015-12-13
S
z
i
l
a
rd Pall
Op
e
nCL
code c
l
ea
n
up
commit
|
commitdiff
|
tree
2015-11-04
Szilard P
a
l
l
Tweak NVML-rela
t
e
d
messages
commit
|
commitdiff
|
tree
2015-11-02
Szilard Pall
Fix signal type
commit
|
commitdiff
|
tree
2015-11-01
Szi
l
ar
d
Pal
l
F
i
x b
u
g in cycle
sub
c
ounte
r
man
a
gement
commit
|
commitdiff
|
tree
2015-10-24
S
zilard Pal
l
Avo
i
d using incom
p
atible NV
M
L version
commit
|
commitdiff
|
tree
2015-10-22
Szilard Pall
Quiet FindNVML
commit
|
commitdiff
|
tree
2015-10-15
Sz
i
lárd Páll
A
dd CUDA
n
v
cc
>
=7
.
0 support
commit
|
commitdiff
|
tree
2015-10-15
S
z
ilár
d
P
á
ll
Correct
CUDA
v
e
rsion comparisons
commit
|
commitdiff
|
tree
2015-10-15
Szila
r
d
P
all
Fix
reset er
r
or message
commit
|
commitdiff
|
tree
2015-09-27
Szi
l
ard Pall
Tweak
t
he
C
U
D
A
GPU shared
mem/L1 config
commit
|
commitdiff
|
tree
2015-09-17
Szilard Pall
Fix broken
O
penCL de
t
ection
commit
|
commitdiff
|
tree
2015-09-16
Szila
r
d
Pall
Fix Open
C
L build
commit
|
commitdiff
|
tree
2015-08-13
S
z
ilard Pall
add
c
l
Flush to kick of OpenCL work
commit
|
commitdiff
|
tree
2015-07-02
S
zil
a
r
d Pal
l
Fix
O
penCL compil
a
tion errors
.
commit
|
commitdiff
|
tree
2015-06-29
Szilard Pall
F
ix CUDA int
e
r-stream synchro
n
ization iss
u
e
commit
|
commitdiff
|
tree
2015-06-27
Szilard Pall
Fix C
U
DA architecture dependent issues
commit
|
commitdiff
|
tree
2015-06-25
Szilard
P
al
l
Add missing macro
u
n
d
ef
i
n
C
UDA NB kernel
commit
|
commitdiff
|
tree
2015-06-21
Szilard
P
all
fix CP
U
c
o
re oversubscr
i
pt
i
on detection
commit
|
commitdiff
|
tree
2015-06-17
Szilard
P
all
fix minor CUDA
N
B kern
e
l pe
r
f
orman
c
e
regression
commit
|
commitdiff
|
tree
2015-06-08
Sz
i
lard Pall
add last two GROMACS
p
aper citatio
n
s
commit
|
commitdiff
|
tree
2015-06-06
Szilard Pall
O
p
timize ato
m
ic accumulation in CUDA NB kernel
commit
|
commitdiff
|
tree
2015-05-15
Szi
l
ar
d
Pall
Asser
t
th
e
siz
e
o
f non-
b
onded
G
PU work units
commit
|
commitdiff
|
tree
2015-05-14
Szil
a
rd Pa
l
l
Merge release-4-6 into rel
e
as
e
-5-0
commit
|
commitdiff
|
tree
2015-05-13
Szilard Pall
Fix aut
o
-downloaded regression te
s
t execution
commit
|
commitdiff
|
tree
2015-05-06
Szil
á
rd
Páll
M
erge "Merge releas
e
-4
-
6
i
nt
o
release-5-0" into release-5-0
commit
|
commitdiff
|
tree
2015-01-16
Szilard Pall
I
mprove and
c
larify mdru
n
behavior wit
h
nst
e
ps<0
commit
|
commitdiff
|
tree
2014-12-10
Szil
a
rd
Pall
F
ix nst
e
p
command l
i
ne override prin
t
commit
|
commitdiff
|
tree
2014-06-01
Szilár
d
P
á
ll
Add q
u
ote on the kT-k
j
/mol conversi
o
n factor
commit
|
commitdiff
|
tree
2014-03-11
Szilárd Páll
B
u
mp require
d
CUDA vers
i
on to 4
.
0
commit
|
commitdiff
|
tree
2014-03-01
S
z
il
a
rd
P
a
ll
Added C
U
DA LJ-PME nbnxn k
e
rnels
commit
|
commitdiff
|
tree
2014-02-28
Szilard P
a
l
l
Improved CUDA n
o
n
-bonded ker
n
e
l
perfor
m
ance
commit
|
commitdiff
|
tree
2014-02-27
S
z
ilar
d
Pall
CUDA ke
r
n
el
s
fo
r
switched LJ
commit
|
commitdiff
|
tree
2014-02-21
Szilard Pall
portabi
l
ity aspe
c
ts in ins
t
all guide + minor
t
w
eaks
commit
|
commitdiff
|
tree
2013-12-02
Sz
i
lard Pall
remove legacy
C
UDA non-bon
d
ed kernels
commit
|
commitdiff
|
tree
2013-11-19
Szilár
d
P
á
ll
F
i
x
DD load
balancing bug wit
h
GPU s
h
aring
commit
|
commitdiff
|
tree
next