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2013-02-15	Mark Abraham	Merge "Minor fixes to Verlet kernels" into release-4-6	commit \| commitdiff \| tree
2013-02-15	Mark Abraham	Merge "improved PME load balancing reporting" into...	commit \| commitdiff \| tree
2013-02-15	Mark Abraham	Merge "Re-generated group kernels" into release-4-6	commit \| commitdiff \| tree
2013-02-15	Mark Abraham	Merge "Unwinds flag dependencies in g_order." into...	commit \| commitdiff \| tree
2013-02-15	Mark Abraham	Merge "use legacy CUDA non-bonded kernels only on Fermi...	commit \| commitdiff \| tree
2013-02-15	Mark Abraham	Merge "More descriptive Verlet kernel macro parameter...	commit \| commitdiff \| tree
2013-02-15	Mark Abraham	Minor fixes to Verlet kernels	commit \| commitdiff \| tree
2013-02-15	Mark Abraham	Merge "Fix and add Verlet kernel error messages" into...	commit \| commitdiff \| tree
2013-02-13	Mark Abraham	Fix code bug with thread-MPI on PowerPC with xlc	commit \| commitdiff \| tree
2013-02-13	Mark Abraham	More descriptive Verlet kernel macro parameter names	commit \| commitdiff \| tree
2013-02-13	Mark Abraham	Fix and add Verlet kernel error messages	commit \| commitdiff \| tree
2013-02-13	Mark Abraham	Re-generated group kernels	commit \| commitdiff \| tree
2013-02-12	Mark Abraham	Merge "PME-only counters are now reset with -maxh ...	commit \| commitdiff \| tree
2013-02-12	Mark Abraham	Merge "fixed bug with sd integrator and OpenMP threading...	commit \| commitdiff \| tree
2013-02-12	Mark Abraham	Merge "Fix CUDA_HOST_COMPILER flag name" into release-4-6	commit \| commitdiff \| tree
2013-02-09	Mark Abraham	Typo fix	commit \| commitdiff \| tree
2013-02-08	Mark Abraham	Merge "added back cuda.h includes to fix missing CUDA_VERSIO...	commit \| commitdiff \| tree
2013-02-08	Mark Abraham	Merge "Fixed flop counting for generic cg/adress kernels...	commit \| commitdiff \| tree
2013-02-08	Mark Abraham	Merge "cmake: fixed typo in template CMakeLists.txt...	commit \| commitdiff \| tree
2013-02-05	Mark Abraham	Merge "improved load balancing on the GPU" into release-4-6	commit \| commitdiff \| tree
2013-02-05	Mark Abraham	Documented what GMX_CPU_ACCELERATION really means	commit \| commitdiff \| tree
2013-01-22	Mark Abraham	Merge "Illegal acceleration defaulted to QPX" into...	commit \| commitdiff \| tree
2013-01-22	Mark Abraham	Merge "Re-licenced FindGROMACS.cmake (was written by...	commit \| commitdiff \| tree
2013-01-22	Mark Abraham	Merge "Fix TOUPPER usage" into release-4-6	commit \| commitdiff \| tree
2013-01-22	Mark Abraham	Merge "Updated html manual to 4.6" into release-4-6	commit \| commitdiff \| tree
2013-01-22	Mark Abraham	Merge "added missing cleanup of some nbnxn_cuda data...	commit \| commitdiff \| tree
2013-01-18	Mark Abraham	Set version info for 4.6.x release series	commit \| commitdiff \| tree
2013-01-18	Mark Abraham	New major release: 4.6	commit \| commitdiff \| tree
2013-01-18	Mark Abraham	Fixing copyright issues and code contributors Added Mark Abraham, Christoph Junghans and	commit \| commitdiff \| tree
2013-01-17	Mark Abraham	Updating the shell completion files	commit \| commitdiff \| tree
2013-01-17	Mark Abraham	Gromacs install guide updates.	commit \| commitdiff \| tree
2013-01-17	Mark Abraham	Merge "Remove unnecessary ICC flags affecting performance...	commit \| commitdiff \| tree
2013-01-17	Mark Abraham	Merge "improved CUDA kernel performance by pre-loading...	commit \| commitdiff \| tree
2013-01-17	Mark Abraham	Merge "Fix trjconv -sub with .trr files" into release...	commit \| commitdiff \| tree
2013-01-17	Mark Abraham	BlueGene/Q installation notes	commit \| commitdiff \| tree
2013-01-17	Mark Abraham	Merge branch 'release-4-5-patches' into release-4-6	commit \| commitdiff \| tree
2013-01-17	Mark Abraham	Merge "Added mdp option 'calc-lambda-neighbors'." into...	commit \| commitdiff \| tree
2013-01-17	Mark Abraham	Fix trjconv -sub with .trr files	commit \| commitdiff \| tree
2013-01-17	Mark Abraham	Finally move OpenMM to contrib	commit \| commitdiff \| tree
2013-01-16	Mark Abraham	Quiet stderr output, particularly for multi-simulations	commit \| commitdiff \| tree
2013-01-15	Mark Abraham	Added check for valid wall_atomtype in .mdp	commit \| commitdiff \| tree
2013-01-15	Mark Abraham	Merge "Hid nbnxn kernel names behind a lookup function...	commit \| commitdiff \| tree
2013-01-15	Mark Abraham	Velocity-verlet integrators and v-rescale are broken	commit \| commitdiff \| tree
2013-01-14	Mark Abraham	Added fatal error for constraints + L-BFGS minimizer	commit \| commitdiff \| tree
2013-01-14	Mark Abraham	Hid nbnxn kernel names behind a lookup function	commit \| commitdiff \| tree
2013-01-13	Mark Abraham	Updated code checks with distance restraints	commit \| commitdiff \| tree
2013-01-13	Mark Abraham	Fixing trjconv -sub	commit \| commitdiff \| tree
2013-01-13	Mark Abraham	Noting that and why gmxdump -s -sys is broken	commit \| commitdiff \| tree
2013-01-13	Mark Abraham	Clarified some comments & warnings about thread pinning	commit \| commitdiff \| tree
2013-01-13	Mark Abraham	Manage BlueGene/Q configuration	commit \| commitdiff \| tree
2013-01-13	Mark Abraham	Re-organize BlueGene toolchain files	commit \| commitdiff \| tree
2013-01-13	Mark Abraham	Changed defaults for building shared libraries	commit \| commitdiff \| tree
2013-01-13	Mark Abraham	Merge "Added basic CPU topology information to cpuid...	commit \| commitdiff \| tree
2013-01-10	Mark Abraham	Merge "Revert default rlist/rvdw/rcoulomb to valid...	commit \| commitdiff \| tree
2013-01-10	Mark Abraham	Merge "fixed bug with Verlet + DD + bonded atom communicatio...	commit \| commitdiff \| tree
2013-01-10	Mark Abraham	Merge "Fixes SSE/AVX compilation under Windows" into...	commit \| commitdiff \| tree
2013-01-07	Mark Abraham	Reduce use of monolithic sets of compiler flags	commit \| commitdiff \| tree
2013-01-04	Mark Abraham	Set CMake module search path at a better time	commit \| commitdiff \| tree
2012-12-22	Mark Abraham	New beta release: 4.6-beta3	commit \| commitdiff \| tree
2012-12-19	Mark Abraham	Merge "Remove the rest of the fortran/power6 acceleration...	commit \| commitdiff \| tree
2012-12-19	Mark Abraham	Merge "Always build template program" into release-4-6	commit \| commitdiff \| tree
2012-12-19	Mark Abraham	Fix Reference build type	commit \| commitdiff \| tree
2012-12-19	Mark Abraham	Removed orphan file	commit \| commitdiff \| tree
2012-12-19	Mark Abraham	Avoid using undefined CMake variables	commit \| commitdiff \| tree
2012-12-13	Mark Abraham	Fix typo	commit \| commitdiff \| tree
2012-12-06	Mark Abraham	New beta release: 4.6-beta2	commit \| commitdiff \| tree
2012-12-06	Mark Abraham	Apply LGPL license to new files	commit \| commitdiff \| tree
2012-12-06	Mark Abraham	Updates for install guide	commit \| commitdiff \| tree
2012-12-06	Mark Abraham	Eliminate confusion from pkgconfig FFTW detection	commit \| commitdiff \| tree
2012-12-05	Mark Abraham	Merge "don't auto-set nvcc host compiler with cmake...	commit \| commitdiff \| tree
2012-12-05	Mark Abraham	Merge "Keep FindCUDA quiet when it is not useful" into...	commit \| commitdiff \| tree
2012-12-05	Mark Abraham	Merge "Remove TEST_TMPI_ATOMICS_ONLY" into release-4-6	commit \| commitdiff \| tree
2012-12-05	Mark Abraham	Merge "Re-apply -dev version name between beta 1 and...	commit \| commitdiff \| tree
2012-12-05	Mark Abraham	Merge "Fixed labelling of g_hbond plots" into release-4-6	commit \| commitdiff \| tree
2012-12-05	Mark Abraham	Re-apply -dev version name between beta 1 and beta 2	commit \| commitdiff \| tree
2012-12-05	Mark Abraham	Keep FindCUDA quiet when it is not useful	commit \| commitdiff \| tree
2012-11-29	Mark Abraham	Update copyright statements and change license to LGPL	commit \| commitdiff \| tree
2012-11-29	Mark Abraham	Merge "Initial commit of new install guide" into release-4-6	commit \| commitdiff \| tree
2012-11-29	Mark Abraham	Merge "Bump version to 4.6-beta1" into release-4-6	commit \| commitdiff \| tree
2012-11-29	Mark Abraham	Initial commit of new install guide	commit \| commitdiff \| tree
2012-11-29	Mark Abraham	Bump version to 4.6-beta1	commit \| commitdiff \| tree
2012-11-29	Mark Abraham	Merge "Added .gitignore for kernel generation" into...	commit \| commitdiff \| tree
2012-11-29	Mark Abraham	Merge "Double precision AVX-256 kernels" into release-4-6	commit \| commitdiff \| tree
2012-11-29	Mark Abraham	Added .gitignore for kernel generation	commit \| commitdiff \| tree
2012-11-29	Mark Abraham	Merge "Fixing issue with GPU detection reporting" into...	commit \| commitdiff \| tree
2012-11-29	Mark Abraham	Merge "Double precision AVX_128_FMA kernels" into release-4-6	commit \| commitdiff \| tree
2012-11-29	Mark Abraham	Merge "Fix: pthread variables were overwritten by gmxManageG...	commit \| commitdiff \| tree
2012-11-29	Mark Abraham	Fixing issue with GPU detection reporting	commit \| commitdiff \| tree
2012-11-29	Mark Abraham	Refuse to build with clang 3.0	commit \| commitdiff \| tree
2012-11-29	Mark Abraham	Add a CMake warning about FFTW with --enable-avx	commit \| commitdiff \| tree
2012-11-29	Mark Abraham	Merge "automation for setting GMX_GPU & cmake GPU detection...	commit \| commitdiff \| tree
2012-11-29	Mark Abraham	Merge "SSE4.1 double precision kernels" into release-4-6	commit \| commitdiff \| tree
2012-11-29	Mark Abraham	Merge "Double precision SSE2 kernels" into release-4-6	commit \| commitdiff \| tree
2012-11-28	Mark Abraham	Merge "Ported back some AVX256 optimizations to SSE2...	commit \| commitdiff \| tree
2012-11-28	Mark Abraham	Merge "Fix Window-GPU build" into release-4-6	commit \| commitdiff \| tree
2012-11-28	Mark Abraham	Merge "extended nbnxn x86 SIMD kernel blendv support...	commit \| commitdiff \| tree
2012-11-26	Mark Abraham	Clean up some mathematical constants	commit \| commitdiff \| tree
2012-11-23	Mark Abraham	Updates to CMake treatment of OpenMP	commit \| commitdiff \| tree
2012-11-22	Mark Abraham	Speed up mdlib compilation by reordering file globs	commit \| commitdiff \| tree
2012-11-19	Mark Abraham	Merge "SSE4.1 single-precision kernels" into release-4-6	commit \| commitdiff \| tree
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