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2020-02-21	M. Eric Irrgang	Simplify GitLab CI Dockerfiles.	commit \| commitdiff \| tree
2020-01-03	M. Eric Irrgang	Remove transitional links for online gmxapi Python...	commit \| commitdiff \| tree
2019-12-28	M. Eric Irrgang	Resolve CMake ambiguities for gmxapi Python package...	commit \| commitdiff \| tree
2019-12-27	M. Eric Irrgang	Update intersphinx configuration.	commit \| commitdiff \| tree
2019-12-26	M. Eric Irrgang	Set Sphinx default role.	commit \| commitdiff \| tree
2019-12-26	M. Eric Irrgang	Fix external web link.	commit \| commitdiff \| tree
2019-12-26	M. Eric Irrgang	Clean up Sphinx interpreted text in the default role.	commit \| commitdiff \| tree
2019-12-19	M. Eric Irrgang	Add issue tracking for deprecations.	commit \| commitdiff \| tree
2019-12-18	M. Eric Irrgang	Update reference to uncrustify and clang-format.	commit \| commitdiff \| tree
2019-12-17	M. Eric Irrgang	Be more specific with clang-format suggestions.	commit \| commitdiff \| tree
2019-12-11	M. Eric Irrgang	gmxapi landing page update.	commit \| commitdiff \| tree
2019-12-11	M. Eric Irrgang	gmxapi documentation readability improvements.	commit \| commitdiff \| tree
2019-12-11	M. Eric Irrgang	gmxapi documentation formatting improvements.	commit \| commitdiff \| tree
2019-12-07	M. Eric Irrgang	Finalize gmxapi 0.1	commit \| commitdiff \| tree
2019-12-06	M. Eric Irrgang	Add notes on MPI with gmxapi Python package.	commit \| commitdiff \| tree
2019-12-06	M. Eric Irrgang	gmxapi Python package usage prose.	commit \| commitdiff \| tree
2019-12-06	M. Eric Irrgang	Improve pytest fixtures for directory management.	commit \| commitdiff \| tree
2019-11-27	M. Eric Irrgang	Add gmxapi_extension tests to 'tests' target.	commit \| commitdiff \| tree
2019-11-20	M. Eric Irrgang	Remove stub content from gmxapi docs.	commit \| commitdiff \| tree
2019-11-17	M. Eric Irrgang	Remove extraneous file.	commit \| commitdiff \| tree
2019-11-17	M. Eric Irrgang	Add transitional links for online gmxapi Python package...	commit \| commitdiff \| tree
2019-11-17	M. Eric Irrgang	Improve gmxapi Dockerfiles.	commit \| commitdiff \| tree
2019-11-11	M. Eric Irrgang	Achieve gmxapi fr15.	commit \| commitdiff \| tree
2019-11-11	M. Eric Irrgang	Updates to gmxapi FR15 acceptance test.	commit \| commitdiff \| tree
2019-11-11	M. Eric Irrgang	Update notes and tests regarding gmxapi acceptance...	commit \| commitdiff \| tree
2019-11-08	M. Eric Irrgang	Fix bug introduced by clang-format reformat.	commit \| commitdiff \| tree
2019-11-05	M. Eric Irrgang	Update googletest location in COPYING.	commit \| commitdiff \| tree
2019-11-04	M. Eric Irrgang	Update gmxapi Python documentation instructions.	commit \| commitdiff \| tree
2019-11-03	M. Eric Irrgang	Update Sphinx link.	commit \| commitdiff \| tree
2019-11-03	M. Eric Irrgang	Fix typos.	commit \| commitdiff \| tree
2019-11-01	M. Eric Irrgang	Fix documentation typo.	commit \| commitdiff \| tree
2019-11-01	M. Eric Irrgang	Normalize sample_restraint target names.	commit \| commitdiff \| tree
2019-10-31	M. Eric Irrgang	Allow validation of the generated CMake toolchain file.	commit \| commitdiff \| tree
2019-10-31	M. Eric Irrgang	Improve uniformity of OS X CMake configuration.	commit \| commitdiff \| tree
2019-10-31	M. Eric Irrgang	Restore CMake convenience targets for sample_restraint.	commit \| commitdiff \| tree
2019-10-31	M. Eric Irrgang	Deduplicate gmxapi documentation.	commit \| commitdiff \| tree
2019-10-29	M. Eric Irrgang	Disable its tests when sample_restraint is not the...	commit \| commitdiff \| tree
2019-10-29	M. Eric Irrgang	Decrease the maximum allowed Python version for gmxapi.	commit \| commitdiff \| tree
2019-10-28	M. Eric Irrgang	Update bundled pybind.	commit \| commitdiff \| tree
2019-10-27	M. Eric Irrgang	Fix CMake message typo.	commit \| commitdiff \| tree
2019-10-25	M. Eric Irrgang	Improve gmxapi mdrun test.	commit \| commitdiff \| tree
2019-10-23	M. Eric Irrgang	Suppress some output when sample_restraint is built...	commit \| commitdiff \| tree
2019-10-21	M. Eric Irrgang	Add trajectory output to mdrun operation.	commit \| commitdiff \| tree
2019-10-16	M. Eric Irrgang	Minor tidying to mdrun.py	commit \| commitdiff \| tree
2019-10-16	M. Eric Irrgang	Minor clean-up to gmxapi package.	commit \| commitdiff \| tree
2019-10-16	M. Eric Irrgang	Update gmxapi.version module.	commit \| commitdiff \| tree
2019-10-15	M. Eric Irrgang	Fix logic error in StaticSourceManager intialization.	commit \| commitdiff \| tree
2019-10-15	M. Eric Irrgang	Add note about libpython requirement to gmxapi install...	commit \| commitdiff \| tree
2019-10-15	M. Eric Irrgang	Add generic check for gmxapi support library to Python...	commit \| commitdiff \| tree
2019-10-14	M. Eric Irrgang	Fix logic error in gmxapi.version.api_is_at_least().	commit \| commitdiff \| tree
2019-10-13	M. Eric Irrgang	Update sample_restraint documentation entry points.	commit \| commitdiff \| tree
2019-10-13	M. Eric Irrgang	Test float and int gmxapi parameter updates.	commit \| commitdiff \| tree
2019-10-13	M. Eric Irrgang	Usability updates for gmxapi/docs Docker image.	commit \| commitdiff \| tree
2019-10-12	M. Eric Irrgang	Improve parameter typing for gmxapi simulation parameter...	commit \| commitdiff \| tree
2019-10-08	M. Eric Irrgang	Update handling of CMake policy 68..	commit \| commitdiff \| tree
2019-10-07	M. Eric Irrgang	Update rpath comments in src/api/cpp	commit \| commitdiff \| tree
2019-10-03	M. Eric Irrgang	Build gmxapi documentation in main GROMACS documentation.	commit \| commitdiff \| tree
2019-09-16	M. Eric Irrgang	Add gmxapi release notes.	commit \| commitdiff \| tree
2019-09-15	M. Eric Irrgang	Import gmxapi docs to main GROMACS docs directory.	commit \| commitdiff \| tree
2019-09-13	M. Eric Irrgang	Normalize usage of GMXTOOLCHAINDIR in gmxapi setup.py	commit \| commitdiff \| tree
2019-09-13	M. Eric Irrgang	Do not use gromacs-toolchain in darwin gmxapi builds.	commit \| commitdiff \| tree
2019-09-13	M. Eric Irrgang	Update gmxapi setup.py	commit \| commitdiff \| tree
2019-09-11	M. Eric Irrgang	Use GROMACS CMake toolchain file for gmxapi Python...	commit \| commitdiff \| tree
2019-09-11	M. Eric Irrgang	Add gmxapi.modify_input operation.	commit \| commitdiff \| tree
2019-09-11	M. Eric Irrgang	Provide a gmxapi.read_tpr operation.	commit \| commitdiff \| tree
2019-09-11	M. Eric Irrgang	Update gmxapi.simulation.context details.	commit \| commitdiff \| tree
2019-09-11	M. Eric Irrgang	Allow gmxapi.mdrun to properly dispatch simulation...	commit \| commitdiff \| tree
2019-09-11	M. Eric Irrgang	Update gmxapi Python package infrastructure for new...	commit \| commitdiff \| tree
2019-09-11	M. Eric Irrgang	Normalize some testing resources for the Python packages.	commit \| commitdiff \| tree
2019-09-10	M. Eric Irrgang	Fix parameter key look-up in gmxapi TPR reader.	commit \| commitdiff \| tree
2019-09-10	M. Eric Irrgang	Make gmxcli pytest fixture more robust.	commit \| commitdiff \| tree
2019-09-03	M. Eric Irrgang	Python wrapping code for gmxapi mdrun bindings.	commit \| commitdiff \| tree
2019-08-30	M. Eric Irrgang	Import base code for Python-driven simulation from...	commit \| commitdiff \| tree
2019-08-27	M. Eric Irrgang	Add sample_restraint Python tests to `check` target.	commit \| commitdiff \| tree
2019-08-27	M. Eric Irrgang	Remove unused forward declarations.	commit \| commitdiff \| tree
2019-08-26	M. Eric Irrgang	Rearrange exposure of gmxapicompat simulation input...	commit \| commitdiff \| tree
2019-08-26	M. Eric Irrgang	Move gmxapicompat TPR tools to libgmxapi.	commit \| commitdiff \| tree
2019-08-26	M. Eric Irrgang	Reduce artificial header dependencies in restraint...	commit \| commitdiff \| tree
2019-08-22	M. Eric Irrgang	C++ code and Python bindings for TPR parameter read...	commit \| commitdiff \| tree
2019-08-21	M. Eric Irrgang	Enable GMXAPI by default.	commit \| commitdiff \| tree
2019-08-19	M. Eric Irrgang	Clean up gmxapi documentation build.	commit \| commitdiff \| tree
2019-08-19	M. Eric Irrgang	Add subgraph and while_loop operations.	commit \| commitdiff \| tree
2019-08-14	M. Eric Irrgang	Fix logic error in python_packaging/src/CMakeLists.txt	commit \| commitdiff \| tree
2019-08-14	M. Eric Irrgang	Minor optimization to `pip install` in gmxapi CI build.	commit \| commitdiff \| tree
2019-08-14	M. Eric Irrgang	Add initial .clang-format file.	commit \| commitdiff \| tree
2019-08-13	M. Eric Irrgang	Improve sample_restraint project integration.	commit \| commitdiff \| tree
2019-08-13	M. Eric Irrgang	Don't install googletest.	commit \| commitdiff \| tree
2019-08-13	M. Eric Irrgang	Map gmxapi C++ exceptions to Python exceptions.	commit \| commitdiff \| tree
2019-08-12	M. Eric Irrgang	Introduce Context requirement.	commit \| commitdiff \| tree
2019-08-12	M. Eric Irrgang	Separate out some abstract base classes.	commit \| commitdiff \| tree
2019-08-08	M. Eric Irrgang	Add gmxapi_pytest custom target to CMake `check` target.	commit \| commitdiff \| tree
2019-08-08	M. Eric Irrgang	Allow gmxapi Python package tests to be run from GROMACS...	commit \| commitdiff \| tree
2019-08-08	M. Eric Irrgang	Let base GROMACS docker image be a little more useful.	commit \| commitdiff \| tree
2019-08-08	M. Eric Irrgang	Reenable gtest_main target.	commit \| commitdiff \| tree
2019-08-07	M. Eric Irrgang	Use gmock and gtest targets from googletest-release...	commit \| commitdiff \| tree
2019-08-06	M. Eric Irrgang	Separate out OperationDetailsBase.	commit \| commitdiff \| tree
2019-08-06	M. Eric Irrgang	Convert test infrastructure targets to static library...	commit \| commitdiff \| tree
2019-08-06	M. Eric Irrgang	Resolve a compiler warning for the gmxapi Python package.	commit \| commitdiff \| tree
2019-08-06	M. Eric Irrgang	Add libgromacs dependency to gpu_utilstest_cuda target.	commit \| commitdiff \| tree
2019-08-05	M. Eric Irrgang	Separate out OperationDirector.	commit \| commitdiff \| tree
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