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Merge branch release-5-1 into release-2016
2016-07-08
Szilárd Páll
A
dd
P
DF metadata to the
manua
l
commit
|
commitdiff
|
tree
2016-07-08
Szilárd
Pá
l
l
U
s
er gui
d
e clari
f
ic
a
tions
commit
|
commitdiff
|
tree
2016-07-07
Szilárd Páll
Add
u
ser guide
i
nfo o
n
CUDA application clo
c
ks
commit
|
commitdiff
|
tree
2016-07-05
Szilárd Páll
Documen
t
GMX_GPU_APPLICATION_CLOC
K
S
commit
|
commitdiff
|
tree
2016-07-04
Szilárd Páll
D
i
sable
NVIDIA JIT cache wi
t
h
OpenCL
commit
|
commitdiff
|
tree
2016-06-14
S
zilárd Páll
Fix CUDA build
w
ith
m
ultiple compi
l
atio
n
units
commit
|
commitdiff
|
tree
2016-06-05
Szilárd Pál
l
Add suppo
r
t
f
or
CUDA CC 6
.
0/6
.
1
commit
|
commitdiff
|
tree
2016-06-02
Szilárd Páll
Add env
.
var
.
to en
a
ble OpenCL caching
commit
|
commitdiff
|
tree
2016-06-02
Szilárd Páll
F
ix Open
C
L b
i
nary
c
a
c
h
e
fi
l
e nam
e
generation
commit
|
commitdiff
|
tree
2016-05-05
Szilárd
Páll
Remove CUDA host compiler consistency c
h
ec
k
s
commit
|
commitdiff
|
tree
2016-04-28
Sz
i
lárd Pál
l
W
o
rkaround
f
or gcc fal
s
e positive warning
commit
|
commitdiff
|
tree
2016-04-27
Szil
á
rd Páll
Fix multiple M
P
I ranks p
e
r
n
o
de with
O
pe
n
CL
commit
|
commitdiff
|
tree
2016-04-26
Szilárd
P
áll
Fix OpenCL assertion
commit
|
commitdiff
|
tree
2016-04-19
Szilárd Páll
M
ove out CUDA profil
e
r
triggers f
r
o
m NBNXN
commit
|
commitdiff
|
tree
2016-04-13
Szi
l
árd Páll
Spelling fixes
commit
|
commitdiff
|
tree
2016-04-13
Szilárd Páll
Do not cr
e
ate empty ma
n
/man7 directory
commit
|
commitdiff
|
tree
2016-04-04
Szilárd Pá
l
l
Mark more varia
b
les as ad
v
anced
commit
|
commitdiff
|
tree
2016-03-31
Szil
á
rd Páll
refa
c
tor CUDA textur
e
-based table initializati
o
n
commit
|
commitdiff
|
tree
2016-03-31
Szilárd
P
áll
F
ix mult
i
p
le tM
P
I rank
s
per OpenCL device
commit
|
commitdiff
|
tree
2016-03-30
S
zilárd Páll
LJ co
m
bination
rule kernels for OpenCL
commit
|
commitdiff
|
tree
2016-03-30
Szilárd Páll
Re-enable i-atom type local mem prefetc
h
i
n Op
e
nCL
commit
|
commitdiff
|
tree
2016-03-30
S
zilárd Pá
l
l
Describe AMD APPSDK
3
.
0 issu
e
s
i
n
the guide
commit
|
commitdiff
|
tree
2016-03-17
Szi
l
árd Pá
l
l
Fixe
d
OpenCL e/fs
h
ift clear kerne
l
first invoca
t
ion
commit
|
commitdiff
|
tree
2016-02-26
Szilá
r
d Páll
Fi
x
lef
t
over load(
)
ca
l
ls in the simd u
t
il h
e
ad
e
rs
commit
|
commitdiff
|
tree
2016-02-19
Szilárd P
á
ll
Fix Ope
n
CL table inter
p
olations of Ewald correction
commit
|
commitdiff
|
tree
2016-02-17
Szilárd Páll
reintroduce supercl
intera
c
tion
m
ask co
n
st
a
nt
commit
|
commitdiff
|
tree
2016-02-17
Szilárd Páll
chang
e
macros to const
a
nts in GPU c
o
d
e
commit
|
commitdiff
|
tree
2016-02-15
Szi
l
árd Páll
Al
l
ow GMX_N
B
_MIN_CI=0 to
b
e passed
commit
|
commitdiff
|
tree
2016-02-11
Szilárd
P
áll
Re
-
enable LJ-PME + Lorentz-Berthel
o
t
on GPUs
commit
|
commitdiff
|
tree
2016-02-08
Szilár
d
Páll
Handle uniformly GMX_OCL
_
NOGE
N
CACHE
commit
|
commitdiff
|
tree
2016-01-26
Szilárd Páll
G
PU
c
ode reo
r
ganiz
a
tion an
d
tweak
s
commit
|
commitdiff
|
tree
2016-01-20
Sz
i
l
árd Pá
l
l
M
e
rge
r
emot
e
-tracking
b
ranch 'origin
/
release-5-1' into
.
.
.
commit
|
commitdiff
|
tree
2016-01-09
S
zilárd Páll
spli
t
NBN
X
N CUDA kernels into four com
p
ilation units
commit
|
commitdiff
|
tree
2015-10-15
Szilárd P
á
ll
Add CUDA
n
vc
c
>=7
.
0 suppor
t
commit
|
commitdiff
|
tree
2015-10-15
S
zilár
d
Páll
Correct CUDA versi
o
n com
p
aris
o
ns
commit
|
commitdiff
|
tree
2015-05-06
Szilárd
Páll
Merge "M
e
rge release-4-6 into release-5-0" into relea
s
e
-
5-0
commit
|
commitdiff
|
tree
2015-04-21
Szilárd Páll
Allow manually se
t
ti
n
g
t
arg
e
t
GPU
architectures
commit
|
commitdiff
|
tree
2015-04-17
Szilárd Páll
d
e
fine C
U
DA
v
ersion
and texobj support in config
.
h
commit
|
commitdiff
|
tree
2014-11-29
Szilárd Páll
Add kernel and com
p
iler suport for
C
C
3
.
7 devices
commit
|
commitdiff
|
tree
2014-11-17
Szilárd
P
áll
Allow increasing
CUDA thread blo
c
k size
commit
|
commitdiff
|
tree
2014-11-17
Szilárd
P
áll
Add CUDA
compi
l
er sup
p
ort for CC
5
.
0
commit
|
commitdiff
|
tree
2014-11-14
Sz
i
lárd Pá
l
l
Start
n
vprof profiling at counte
r
reset
commit
|
commitdiff
|
tree
2014-09-26
Szilárd Páll
Fix incorr
e
ct ass
e
rti
o
n
s
ta
t
ement
commit
|
commitdiff
|
tree
2014-09-09
Szilá
r
d Páll
F
i
x
mal
f
ormed CUDA ver
s
ion ma
c
ro check
commit
|
commitdiff
|
tree
2014-06-01
Szilárd
P
áll
Add
q
uo
t
e
o
n the kT-kj/mol
c
onversion factor
commit
|
commitdiff
|
tree
2014-03-11
Szilárd Páll
Bump requi
r
e
d
CUD
A
vers
i
on to 4
.
0
commit
|
commitdiff
|
tree
2014-01-28
S
zilárd Páll
clarif
i
ed OpenMP-related thin
g
s in mdr
u
n hel
p
/man
commit
|
commitdiff
|
tree
2013-11-19
Szilá
r
d
Pál
l
Fix DD load
b
a
lancing b
u
g
w
i
t
h GPU sharing
commit
|
commitdiff
|
tree
2013-05-30
Szilárd Páll
fix unnec
e
ssary
switch to p
o
lling GPU wait
commit
|
commitdiff
|
tree
2013-02-10
Szilárd
P
á
ll
use legacy CUDA non
-
bonded k
e
rnels only on F
e
rmi
commit
|
commitdiff
|
tree
2013-01-18
Szi
l
árd Páll
fix
O
penM
P
detection on Mac
OS broken by a6fee0b
commit
|
commitdiff
|
tree
2013-01-17
S
zilárd Páll
added
missing cleanup of some
n
bnxn_cuda d
a
ta
commit
|
commitdiff
|
tree
2013-01-17
Szilárd
Páll
Merg
e
changes I930b316c,Iea4283e0,I103648f8 into r
e
le
a
se
-
4-6
commit
|
commitdiff
|
tree
2013-01-17
Sz
i
lárd Páll
u
s
e
the comp
i
ler version provided by
CMake >=2
.
8
.
9
commit
|
commitdiff
|
tree
2013-01-17
Szilárd Pá
l
l
note
the r
e
ason for auto-disabling G
P
U
s
u
p
por
t
in CMake
commit
|
commitdiff
|
tree
2013-01-17
S
z
i
lárd
Páll
clarif
y
wording
of GPU drive
r
-
r
elated note
s
commit
|
commitdiff
|
tree
2013-01-15
Sz
i
lár
d
P
áll
disabl
e
OpenMP w
i
th all OS X gcc 4
.
2-based
c
o
mpilers
commit
|
commitdiff
|
tree
2012-12-19
Szilár
d
Páll
Merg
e
"A
v
o
id using unde
f
ined CMake varia
b
le
s
" i
n
to
.
.
.
commit
|
commitdiff
|
tree
2012-12-19
Szilárd Pá
l
l
M
e
r
ge "Removed orphan file" into release-4-6
commit
|
commitdiff
|
tree
2012-12-17
Szilá
r
d Páll
Merge "
r
e
d
uc
e
d
PLINCS
c
ommuni
c
a
ti
o
n with H-b
o
nd constraints
.
.
.
commit
|
commitdiff
|
tree
2012-11-28
Sz
i
lárd Páll
Merge changes I9b
8
6
5c4c,Ib709
2
90e into release-
4
-6
commit
|
commitdiff
|
tree
2012-11-23
Szilár
d
Páll
Merge "Update
s
to CMake treatme
n
t of OpenMP"
i
nto release-4-6
commit
|
commitdiff
|
tree
2012-10-25
Szilárd Páll
fix false
p
ositive gcc 4
.
7 warning in l
i
bxd
r
f
commit
|
commitdiff
|
tree
2012-10-24
Szilá
r
d Páll
enabl
e
GMX_PREFER_STATIC_LIBS C
M
ake option on
M
ac OS X
commit
|
commitdiff
|
tree
2012-07-03
Szilárd P
á
ll
Merge
"
Minor fo
r
matting and consisten
c
y changes to
.
.
.
commit
|
commitdiff
|
tree
2012-05-25
Szi
l
árd Pá
l
l
Merge "F
i
x Clang 3
.
1
compile error"
commit
|
commitdiff
|
tree
2012-04-26
Sz
i
lá
r
d
P
áll
Merge "f
i
x
e
d
initial C
O
M motion removal
w
ith multiple
.
.
.
commit
|
commitdiff
|
tree
2012-02-11
Sz
i
l
árd Páll
M
erge changes If0c2f9d9,I
c
2
a
8
ad8
2
into release-
4
-5
.
.
.
commit
|
commitdiff
|
tree
2012-02-02
Szilárd Páll
M
e
r
g
e "Append all ICC Performa
n
ce fl
a
gs only to
Release
.
.
.
commit
|
commitdiff
|
tree
2012-02-02
Szi
l
árd
P
áll
Merge "Merg
e
s in thr
e
ading b
r
anch as one squa
s
hed commit
.
.
.
commit
|
commitdiff
|
tree
2011-10-06
Szilárd Pál
l
Merge "Rem
o
ved
dup
l
ica
t
e CMake fu
n
ctionality" into
.
.
.
commit
|
commitdiff
|
tree