Move some mdrun code out of gmxlib/
commit92bb11ed775be9a478aee5b647473d86126e0c23
authorTeemu Murtola <teemu.murtola@gmail.com>
Sun, 13 Dec 2015 10:20:21 +0000 (13 12:20 +0200)
committerMark Abraham <mark.j.abraham@gmail.com>
Tue, 15 Dec 2015 02:15:39 +0000 (15 03:15 +0100)
treea0610633a5daeff747ac5f2e3b218f8bc9eb697c
parent2e0d624b64aaf65db3f950c5684331c723f655d0
Move some mdrun code out of gmxlib/

- Move sighandler.* to mdlib, since it is specific to mdrun.
- Move thread_affinity.* to mdrunutility, since it is only used from
  runner.cpp.  Convert existing comments to rudimentary Doxygen
  documentation to avoid check-source and Doxygen warnings.

Change-Id: I83d431497480bcfa2b2edf8f347708a0c1832005
src/gromacs/ewald/pme-pp.cpp
src/gromacs/imd/imd.cpp
src/gromacs/mdlib/sighandler.cpp [moved from src/gromacs/gmxlib/sighandler.cpp with 99% similarity]
src/gromacs/mdlib/sighandler.h [moved from src/gromacs/gmxlib/sighandler.h with 97% similarity]
src/gromacs/mdrunutility/threadaffinity.cpp [moved from src/gromacs/gmxlib/thread_affinity.cpp with 99% similarity]
src/gromacs/mdrunutility/threadaffinity.h [moved from src/gromacs/gmxlib/thread_affinity.h with 86% similarity]
src/programs/mdrun/md.cpp
src/programs/mdrun/runner.cpp