Improve use of gmxpreprocess headers
commit7a1945d8759439beb52e9f8572f28e0642fea377
authorMark Abraham <mark.j.abraham@gmail.com>
Wed, 2 Jan 2019 14:02:14 +0000 (2 15:02 +0100)
committerDavid van der Spoel <spoel@xray.bmc.uu.se>
Sun, 13 Jan 2019 18:10:01 +0000 (13 19:10 +0100)
tree4209cc0cc0afea669525f1bc24bbd69eb776dc6e
parent2e84a90309df5c9a5701b5a4789d1b20bf1469a8
Improve use of gmxpreprocess headers

Less use of typedef struct so that we can have more use of forward
declarations of types.

Less inclusion of headers from headers

Updated stdio.h to cstdio

Localized definition of t_nbparam to the single file it needs to be
in.

Change-Id: I92d2d4e1a9a1bc8062627af45dc606903254803c
51 files changed:
src/gromacs/gmxpreprocess/add_par.h
src/gromacs/gmxpreprocess/convparm.cpp
src/gromacs/gmxpreprocess/convparm.h
src/gromacs/gmxpreprocess/fflibutil.h
src/gromacs/gmxpreprocess/gen_ad.cpp
src/gromacs/gmxpreprocess/gen_ad.h
src/gromacs/gmxpreprocess/gen_vsite.cpp
src/gromacs/gmxpreprocess/gen_vsite.h
src/gromacs/gmxpreprocess/genhydro.cpp
src/gromacs/gmxpreprocess/genhydro.h
src/gromacs/gmxpreprocess/gpp_atomtype.cpp
src/gromacs/gmxpreprocess/gpp_atomtype.h
src/gromacs/gmxpreprocess/gpp_bond_atomtype.cpp
src/gromacs/gmxpreprocess/gpp_bond_atomtype.h
src/gromacs/gmxpreprocess/gpp_nextnb.cpp
src/gromacs/gmxpreprocess/gpp_nextnb.h
src/gromacs/gmxpreprocess/grompp-impl.h
src/gromacs/gmxpreprocess/grompp.cpp
src/gromacs/gmxpreprocess/h_db.cpp
src/gromacs/gmxpreprocess/h_db.h
src/gromacs/gmxpreprocess/hackblock.cpp
src/gromacs/gmxpreprocess/hackblock.h
src/gromacs/gmxpreprocess/hizzie.h
src/gromacs/gmxpreprocess/nm2type.cpp
src/gromacs/gmxpreprocess/nm2type.h
src/gromacs/gmxpreprocess/pdb2gmx.cpp
src/gromacs/gmxpreprocess/pdb2top.cpp
src/gromacs/gmxpreprocess/pdb2top.h
src/gromacs/gmxpreprocess/readir.h
src/gromacs/gmxpreprocess/resall.cpp
src/gromacs/gmxpreprocess/resall.h
src/gromacs/gmxpreprocess/specbond.cpp
src/gromacs/gmxpreprocess/specbond.h
src/gromacs/gmxpreprocess/ter_db.cpp
src/gromacs/gmxpreprocess/ter_db.h
src/gromacs/gmxpreprocess/tomorse.cpp
src/gromacs/gmxpreprocess/tomorse.h
src/gromacs/gmxpreprocess/topdirs.h
src/gromacs/gmxpreprocess/topio.cpp
src/gromacs/gmxpreprocess/topio.h
src/gromacs/gmxpreprocess/toppush.cpp
src/gromacs/gmxpreprocess/toppush.h
src/gromacs/gmxpreprocess/topshake.cpp
src/gromacs/gmxpreprocess/topshake.h
src/gromacs/gmxpreprocess/toputil.cpp
src/gromacs/gmxpreprocess/toputil.h
src/gromacs/gmxpreprocess/vsite_parm.cpp
src/gromacs/gmxpreprocess/vsite_parm.h
src/gromacs/gmxpreprocess/x2top.cpp
src/gromacs/gmxpreprocess/xlate.cpp
src/gromacs/gmxpreprocess/xlate.h