Move cycle counting into the GPU bonded module
commit5686049372448859f50626aa8f0f81338380e2cf
authorSzilárd Páll <pall.szilard@gmail.com>
Fri, 26 Jul 2019 18:31:49 +0000 (26 20:31 +0200)
committerMark Abraham <mark.j.abraham@gmail.com>
Wed, 31 Jul 2019 07:36:06 +0000 (31 09:36 +0200)
tree13ba12abe538ef4b20bdf8a9159a71887a168c51
parent0930783523924ab2a15f995ac6d5830044bd9a39
Move cycle counting into the GPU bonded module

Additionally:
- removed some outdated TODOs;
- renamed accumulateEnergyTerms() to waitAccumulateEnergyTerms()
to reflect that it does a blocking wait for results.

Change-Id: I1bd7f1ddecea94ff2696721c9f2d6eac45bea738
src/gromacs/listed_forces/gpubonded.h
src/gromacs/listed_forces/gpubonded_impl.cpp
src/gromacs/listed_forces/gpubonded_impl.cu
src/gromacs/listed_forces/gpubonded_impl.h
src/gromacs/mdlib/forcerec.cpp
src/gromacs/mdlib/forcerec.h
src/gromacs/mdlib/sim_util.cpp
src/gromacs/mdrun/runner.cpp