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commit	45bb8a2aa4f62f6041c070bfd976db2a2062c2bc
author	lindahl <lindahl>
	Sun, 25 Jan 2004 20:37:34 +0000 (25 20:37 +0000)
committer	lindahl <lindahl>
	Sun, 25 Jan 2004 20:37:34 +0000 (25 20:37 +0000)
tree	9e3d87e1a586fa7e2698d2721757fd32c786650c	tree \| snapshot (tar.gz zip)
parent	a816e23aa512fa769f4e654e76ef574f50f42891	commit \| diff

Moved the real code of analysis programs to gmx_* and made g_* wrapper binaries, so
we can remove the wrapper scripts that just caused problems.

103 files changed:

src/tools/Makefile.am		diff \| blob \| blame \| history
src/tools/g_anaeig.c		diff \| blob \| blame \| history
src/tools/g_analyze.c		diff \| blob \| blame \| history
src/tools/g_angle.c		diff \| blob \| blame \| history
src/tools/g_bond.c		diff \| blob \| blame \| history
src/tools/g_bundle.c		diff \| blob \| blame \| history
src/tools/g_chi.c		diff \| blob \| blame \| history
src/tools/g_cluster.c		diff \| blob \| blame \| history
src/tools/g_clustsize.c		diff \| blob \| blame \| history
src/tools/g_com.c		diff \| blob \| blame \| history
src/tools/g_confrms.c		diff \| blob \| blame \| history
src/tools/g_covar.c		diff \| blob \| blame \| history
src/tools/g_density.c		diff \| blob \| blame \| history
src/tools/g_dielectric.c		diff \| blob \| blame \| history
src/tools/g_dih.c		diff \| blob \| blame \| history
src/tools/g_dipoles.c		diff \| blob \| blame \| history
src/tools/g_disre.c		diff \| blob \| blame \| history
src/tools/g_dist.c		diff \| blob \| blame \| history
src/tools/g_dyndom.c		diff \| blob \| blame \| history
src/tools/g_enemat.c		diff \| blob \| blame \| history
src/tools/g_energy.c		diff \| blob \| blame \| history
src/tools/g_filter.c		diff \| blob \| blame \| history
src/tools/g_gyrate.c		diff \| blob \| blame \| history
src/tools/g_h2order.c		diff \| blob \| blame \| history
src/tools/g_hbond.c		diff \| blob \| blame \| history
src/tools/g_helix.c		diff \| blob \| blame \| history
src/tools/g_lie.c		diff \| blob \| blame \| history
src/tools/g_mdmat.c		diff \| blob \| blame \| history
src/tools/g_mindist.c		diff \| blob \| blame \| history
src/tools/g_morph.c		diff \| blob \| blame \| history
src/tools/g_msd.c		diff \| blob \| blame \| history
src/tools/g_multipoles.c		diff \| blob \| blame \| history
src/tools/g_nmeig.c		diff \| blob \| blame \| history
src/tools/g_nmens.c		diff \| blob \| blame \| history
src/tools/g_order.c		diff \| blob \| blame \| history
src/tools/g_potential.c		diff \| blob \| blame \| history
src/tools/g_rama.c		diff \| blob \| blame \| history
src/tools/g_rdf.c		diff \| blob \| blame \| history
src/tools/g_relax.c		diff \| blob \| blame \| history
src/tools/g_rms.c		diff \| blob \| blame \| history
src/tools/g_rmsdist.c		diff \| blob \| blame \| history
src/tools/g_rmsf.c		diff \| blob \| blame \| history
src/tools/g_rotacf.c		diff \| blob \| blame \| history
src/tools/g_run_rms.c	[deleted file]	blob \| blame \| history
src/tools/g_saltbr.c		diff \| blob \| blame \| history
src/tools/g_sas.c		diff \| blob \| blame \| history
src/tools/g_sgangle.c		diff \| blob \| blame \| history
src/tools/g_sorient.c		diff \| blob \| blame \| history
src/tools/g_tcaf.c		diff \| blob \| blame \| history
src/tools/g_traj.c		diff \| blob \| blame \| history
src/tools/g_velacc.c		diff \| blob \| blame \| history
src/tools/g_wham.c		diff \| blob \| blame \| history
src/tools/gmx-ana.c	[deleted file]	blob \| blame \| history
src/tools/gmx_anaeig.c	[copied from src/tools/g_anaeig.c with 100% similarity]	blob \| blame \| history
src/tools/gmx_analyze.c	[copied from src/tools/g_analyze.c with 100% similarity]	blob \| blame \| history
src/tools/gmx_angle.c	[copied from src/tools/g_angle.c with 100% similarity]	blob \| blame \| history
src/tools/gmx_bond.c	[copied from src/tools/g_bond.c with 100% similarity]	blob \| blame \| history
src/tools/gmx_bundle.c	[copied from src/tools/g_bundle.c with 100% similarity]	blob \| blame \| history
src/tools/gmx_chi.c	[copied from src/tools/g_chi.c with 100% similarity]	blob \| blame \| history
src/tools/gmx_cluster.c	[copied from src/tools/g_cluster.c with 100% similarity]	blob \| blame \| history
src/tools/gmx_clustsize.c	[copied from src/tools/g_clustsize.c with 100% similarity]	blob \| blame \| history
src/tools/gmx_com.c	[copied from src/tools/g_com.c with 100% similarity]	blob \| blame \| history
src/tools/gmx_confrms.c	[copied from src/tools/g_confrms.c with 100% similarity]	blob \| blame \| history
src/tools/gmx_covar.c	[copied from src/tools/g_covar.c with 100% similarity]	blob \| blame \| history
src/tools/gmx_density.c	[copied from src/tools/g_density.c with 100% similarity]	blob \| blame \| history
src/tools/gmx_dielectric.c	[copied from src/tools/g_dielectric.c with 100% similarity]	blob \| blame \| history
src/tools/gmx_dih.c	[copied from src/tools/g_dih.c with 100% similarity]	blob \| blame \| history
src/tools/gmx_dipoles.c	[copied from src/tools/g_dipoles.c with 100% similarity]	blob \| blame \| history
src/tools/gmx_disre.c	[copied from src/tools/g_disre.c with 99% similarity]	diff \| blob \| blame \| history
src/tools/gmx_dist.c	[copied from src/tools/g_dist.c with 100% similarity]	blob \| blame \| history
src/tools/gmx_dyndom.c	[copied from src/tools/g_dyndom.c with 100% similarity]	blob \| blame \| history
src/tools/gmx_enemat.c	[copied from src/tools/g_enemat.c with 100% similarity]	blob \| blame \| history
src/tools/gmx_energy.c	[copied from src/tools/g_energy.c with 100% similarity]	blob \| blame \| history
src/tools/gmx_filter.c	[copied from src/tools/g_filter.c with 100% similarity]	blob \| blame \| history
src/tools/gmx_gyrate.c	[copied from src/tools/g_gyrate.c with 100% similarity]	blob \| blame \| history
src/tools/gmx_h2order.c	[copied from src/tools/g_h2order.c with 100% similarity]	blob \| blame \| history
src/tools/gmx_hbond.c	[copied from src/tools/g_hbond.c with 100% similarity]	blob \| blame \| history
src/tools/gmx_helix.c	[copied from src/tools/g_helix.c with 100% similarity]	blob \| blame \| history
src/tools/gmx_lie.c	[copied from src/tools/g_lie.c with 100% similarity]	blob \| blame \| history
src/tools/gmx_mdmat.c	[copied from src/tools/g_mdmat.c with 100% similarity]	blob \| blame \| history
src/tools/gmx_mindist.c	[copied from src/tools/g_mindist.c with 100% similarity]	blob \| blame \| history
src/tools/gmx_morph.c	[copied from src/tools/g_morph.c with 100% similarity]	blob \| blame \| history
src/tools/gmx_msd.c	[copied from src/tools/g_msd.c with 100% similarity]	blob \| blame \| history
src/tools/gmx_multipoles.c	[copied from src/tools/g_multipoles.c with 100% similarity]	blob \| blame \| history
src/tools/gmx_nmeig.c	[copied from src/tools/g_nmeig.c with 100% similarity]	blob \| blame \| history
src/tools/gmx_nmens.c	[copied from src/tools/g_nmens.c with 100% similarity]	blob \| blame \| history
src/tools/gmx_order.c	[copied from src/tools/g_order.c with 100% similarity]	blob \| blame \| history
src/tools/gmx_potential.c	[copied from src/tools/g_potential.c with 100% similarity]	blob \| blame \| history
src/tools/gmx_rama.c	[copied from src/tools/g_rama.c with 100% similarity]	blob \| blame \| history
src/tools/gmx_rdf.c	[copied from src/tools/g_rdf.c with 100% similarity]	blob \| blame \| history
src/tools/gmx_relax.c	[copied from src/tools/g_relax.c with 100% similarity]	blob \| blame \| history
src/tools/gmx_rms.c	[copied from src/tools/g_rms.c with 100% similarity]	blob \| blame \| history
src/tools/gmx_rmsdist.c	[copied from src/tools/g_rmsdist.c with 100% similarity]	blob \| blame \| history
src/tools/gmx_rmsf.c	[copied from src/tools/g_rmsf.c with 100% similarity]	blob \| blame \| history
src/tools/gmx_rotacf.c	[copied from src/tools/g_rotacf.c with 100% similarity]	blob \| blame \| history
src/tools/gmx_saltbr.c	[copied from src/tools/g_saltbr.c with 100% similarity]	blob \| blame \| history
src/tools/gmx_sas.c	[copied from src/tools/g_sas.c with 100% similarity]	blob \| blame \| history
src/tools/gmx_sgangle.c	[copied from src/tools/g_sgangle.c with 100% similarity]	blob \| blame \| history
src/tools/gmx_sorient.c	[copied from src/tools/g_sorient.c with 100% similarity]	blob \| blame \| history
src/tools/gmx_tcaf.c	[copied from src/tools/g_tcaf.c with 100% similarity]	blob \| blame \| history
src/tools/gmx_traj.c	[copied from src/tools/g_traj.c with 100% similarity]	blob \| blame \| history
src/tools/gmx_velacc.c	[copied from src/tools/g_velacc.c with 100% similarity]	blob \| blame \| history
src/tools/gmx_wham.c	[copied from src/tools/g_wham.c with 95% similarity]	diff \| blob \| blame \| history

The ultimate molecular dynamics simulation package

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