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commit	0b626c7f943a354c6b329a4dba2af7d406bfa0fb
author	Berk Hess <hess@csbl10.(none)>
	Mon, 26 Jul 2010 15:56:36 +0000 (26 17:56 +0200)
committer	Berk Hess <hess@csbl10.(none)>
	Mon, 26 Jul 2010 15:56:36 +0000 (26 17:56 +0200)
tree	bd22cf7de25c6c3271bc2eb9557541370d8f55e9	tree \| snapshot (tar.gz zip)
parent	6edd328799f5a3fefdd2a420537de97708953f97	commit \| diff

renamed atom types from amber99_? etc. to the original Amber names and removed Tinker ions

91 files changed:

share/top/amber03.ff/aminoacids.rtp		diff \| blob \| blame \| history
share/top/amber03.ff/aminoacids.vsd		diff \| blob \| blame \| history
share/top/amber03.ff/atomtypes.atp		diff \| blob \| blame \| history
share/top/amber03.ff/dna.rtp		diff \| blob \| blame \| history
share/top/amber03.ff/ffnb.itp		diff \| blob \| blame \| history
share/top/amber03.ff/gbsa.itp		diff \| blob \| blame \| history
share/top/amber03.ff/ions.itp	[copied from share/top/amber94.ff/ions.itp with 57% similarity]	diff \| blob \| blame \| history
share/top/amber03.ff/rna.rtp		diff \| blob \| blame \| history
share/top/amber03.ff/tip3p.itp		diff \| blob \| blame \| history
share/top/amber03.ff/tip4p.itp		diff \| blob \| blame \| history
share/top/amber03.ff/tip4pEW.itp		diff \| blob \| blame \| history
share/top/amber03.ff/tip5p.itp		diff \| blob \| blame \| history
share/top/amber03.ff/urea.itp		diff \| blob \| blame \| history
share/top/amber94.ff/aminoacids.rtp		diff \| blob \| blame \| history
share/top/amber94.ff/aminoacids.vsd		diff \| blob \| blame \| history
share/top/amber94.ff/atomtypes.atp		diff \| blob \| blame \| history
share/top/amber94.ff/dna.rtp		diff \| blob \| blame \| history
share/top/amber94.ff/ffnb.itp		diff \| blob \| blame \| history
share/top/amber94.ff/gbsa.itp		diff \| blob \| blame \| history
share/top/amber94.ff/ions.itp		diff \| blob \| blame \| history
share/top/amber94.ff/rna.rtp		diff \| blob \| blame \| history
share/top/amber94.ff/tip3p.itp	[copied from share/top/amber03.ff/tip3p.itp with 73% similarity]	diff \| blob \| blame \| history
share/top/amber94.ff/tip4p.itp		diff \| blob \| blame \| history
share/top/amber94.ff/tip4pEW.itp		diff \| blob \| blame \| history
share/top/amber94.ff/tip5p.itp		diff \| blob \| blame \| history
share/top/amber94.ff/urea.itp		diff \| blob \| blame \| history
share/top/amber96.ff/aminoacids.rtp		diff \| blob \| blame \| history
share/top/amber96.ff/aminoacids.vsd		diff \| blob \| blame \| history
share/top/amber96.ff/atomtypes.atp		diff \| blob \| blame \| history
share/top/amber96.ff/dna.rtp		diff \| blob \| blame \| history
share/top/amber96.ff/ffnb.itp		diff \| blob \| blame \| history
share/top/amber96.ff/gbsa.itp		diff \| blob \| blame \| history
share/top/amber96.ff/ions.itp	[copied from share/top/amber94.ff/ions.itp with 57% similarity]	diff \| blob \| blame \| history
share/top/amber96.ff/rna.rtp		diff \| blob \| blame \| history
share/top/amber96.ff/tip3p.itp	[copied from share/top/amber03.ff/tip3p.itp with 73% similarity]	diff \| blob \| blame \| history
share/top/amber96.ff/tip4p.itp		diff \| blob \| blame \| history
share/top/amber96.ff/tip4pEW.itp		diff \| blob \| blame \| history
share/top/amber96.ff/tip5p.itp		diff \| blob \| blame \| history
share/top/amber96.ff/urea.itp	[copied from share/top/amber94.ff/urea.itp with 59% similarity]	diff \| blob \| blame \| history
share/top/amber99.ff/aminoacids.rtp		diff \| blob \| blame \| history
share/top/amber99.ff/aminoacids.vsd		diff \| blob \| blame \| history
share/top/amber99.ff/atomtypes.atp		diff \| blob \| blame \| history
share/top/amber99.ff/dna.rtp		diff \| blob \| blame \| history
share/top/amber99.ff/ffnb.itp		diff \| blob \| blame \| history
share/top/amber99.ff/gbsa.itp		diff \| blob \| blame \| history
share/top/amber99.ff/ions.itp	[copied from share/top/amber94.ff/ions.itp with 57% similarity]	diff \| blob \| blame \| history
share/top/amber99.ff/rna.rtp		diff \| blob \| blame \| history
share/top/amber99.ff/tip3p.itp	[copied from share/top/amber03.ff/tip3p.itp with 73% similarity]	diff \| blob \| blame \| history
share/top/amber99.ff/tip4p.itp		diff \| blob \| blame \| history
share/top/amber99.ff/tip4pEW.itp		diff \| blob \| blame \| history
share/top/amber99.ff/tip5p.itp		diff \| blob \| blame \| history
share/top/amber99.ff/urea.itp	[copied from share/top/amber03.ff/urea.itp with 59% similarity]	diff \| blob \| blame \| history
share/top/amber99sb-ildn.ff/aminoacids.rtp		diff \| blob \| blame \| history
share/top/amber99sb-ildn.ff/aminoacids.vsd		diff \| blob \| blame \| history
share/top/amber99sb-ildn.ff/atomtypes.atp		diff \| blob \| blame \| history
share/top/amber99sb-ildn.ff/dna.rtp		diff \| blob \| blame \| history
share/top/amber99sb-ildn.ff/ffnb.itp		diff \| blob \| blame \| history
share/top/amber99sb-ildn.ff/gbsa.itp		diff \| blob \| blame \| history
share/top/amber99sb-ildn.ff/ions.itp	[copied from share/top/amber94.ff/ions.itp with 57% similarity]	diff \| blob \| blame \| history
share/top/amber99sb-ildn.ff/rna.rtp		diff \| blob \| blame \| history
share/top/amber99sb-ildn.ff/tip3p.itp	[copied from share/top/amber03.ff/tip3p.itp with 73% similarity]	diff \| blob \| blame \| history
share/top/amber99sb-ildn.ff/tip4p.itp		diff \| blob \| blame \| history
share/top/amber99sb-ildn.ff/tip4pEW.itp		diff \| blob \| blame \| history
share/top/amber99sb-ildn.ff/tip5p.itp		diff \| blob \| blame \| history
share/top/amber99sb-ildn.ff/urea.itp	[copied from share/top/amber03.ff/urea.itp with 59% similarity]	diff \| blob \| blame \| history
share/top/amber99sb.ff/aminoacids.rtp		diff \| blob \| blame \| history
share/top/amber99sb.ff/aminoacids.vsd		diff \| blob \| blame \| history
share/top/amber99sb.ff/atomtypes.atp		diff \| blob \| blame \| history
share/top/amber99sb.ff/dna.rtp		diff \| blob \| blame \| history
share/top/amber99sb.ff/ffnb.itp		diff \| blob \| blame \| history
share/top/amber99sb.ff/gbsa.itp		diff \| blob \| blame \| history
share/top/amber99sb.ff/ions.itp	[copied from share/top/amber94.ff/ions.itp with 57% similarity]	diff \| blob \| blame \| history
share/top/amber99sb.ff/rna.rtp		diff \| blob \| blame \| history
share/top/amber99sb.ff/tip3p.itp	[copied from share/top/amber03.ff/tip3p.itp with 73% similarity]	diff \| blob \| blame \| history
share/top/amber99sb.ff/tip4p.itp		diff \| blob \| blame \| history
share/top/amber99sb.ff/tip4pEW.itp		diff \| blob \| blame \| history
share/top/amber99sb.ff/tip5p.itp		diff \| blob \| blame \| history
share/top/amber99sb.ff/urea.itp	[copied from share/top/amber03.ff/urea.itp with 59% similarity]	diff \| blob \| blame \| history
share/top/amberGS.ff/aminoacids.rtp		diff \| blob \| blame \| history
share/top/amberGS.ff/aminoacids.vsd		diff \| blob \| blame \| history
share/top/amberGS.ff/atomtypes.atp		diff \| blob \| blame \| history
share/top/amberGS.ff/dna.rtp		diff \| blob \| blame \| history
share/top/amberGS.ff/ffnb.itp		diff \| blob \| blame \| history
share/top/amberGS.ff/gbsa.itp		diff \| blob \| blame \| history
share/top/amberGS.ff/ions.itp	[copied from share/top/amber94.ff/ions.itp with 57% similarity]	diff \| blob \| blame \| history
share/top/amberGS.ff/rna.rtp		diff \| blob \| blame \| history
share/top/amberGS.ff/tip3p.itp	[copied from share/top/amber03.ff/tip3p.itp with 73% similarity]	diff \| blob \| blame \| history
share/top/amberGS.ff/tip4p.itp		diff \| blob \| blame \| history
share/top/amberGS.ff/tip4pEW.itp		diff \| blob \| blame \| history
share/top/amberGS.ff/tip5p.itp		diff \| blob \| blame \| history
share/top/amberGS.ff/urea.itp	[copied from share/top/amber03.ff/urea.itp with 59% similarity]	diff \| blob \| blame \| history

The ultimate molecular dynamics simulation package

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