repo.or.cz
/
bioperl-run.git
/
tree
commit
grep
author
committer
pickaxe
?
search:
re
summary
|
log
|
graphiclog1
|
graphiclog2
|
commit
|
commitdiff
|
tree
|
refs
|
edit
|
fork
history
|
HEAD
|
snapshot (
tar.gz
zip
)
test
[bioperl-run.git]
/
t
/
data
/
tree
f02b7214d85303481214aeeda8c416fe07bc4fa9
drwxr-xr-x
..
-rw-r--r--
666
219877.cdna.fasta
blob
|
blame
|
history
|
raw
-rw-r--r--
87
219877.tree
blob
|
blame
|
history
|
raw
-rw-r--r--
591
277523.cdna.fasta
blob
|
blame
|
history
|
raw
-rw-r--r--
87
277523.tree
blob
|
blame
|
history
|
raw
-rw-r--r--
4803
FootPrinter.seq.fa
blob
|
blame
|
history
|
raw
-rw-r--r--
1117
Genscan.FastA
blob
|
blame
|
history
|
raw
-rw-r--r--
102048
H_pylori_J99.fasta
blob
|
blame
|
history
|
raw
-rw-r--r--
1412598
H_pylori_J99.glimmer2.icm
blob
|
blame
|
history
|
raw
-rw-r--r--
1387212
H_pylori_J99.glimmer3.icm
blob
|
blame
|
history
|
raw
-rw-r--r--
10385
NM_002254.gb
blob
|
blame
|
history
|
raw
-rwxr-xr-x
5593
NM_002254.tfa
blob
|
blame
|
history
|
raw
-rw-r--r--
7829
Phrap.fa
blob
|
blame
|
history
|
raw
-rw-r--r--
220
Primer3.fa
blob
|
blame
|
history
|
raw
-rw-r--r--
337
Prints_prot.FastA
blob
|
blame
|
history
|
raw
-rw-r--r--
161750
TribeMCL.bls
blob
|
blame
|
history
|
raw
-rw-r--r--
33278
TribeMCL.desc
blob
|
blame
|
history
|
raw
-rw-r--r--
456
amino.fa
blob
|
blame
|
history
|
raw
-rwxr-xr-x
500
apes.multi_fasta
blob
|
blame
|
history
|
raw
-rwxr-xr-x
245
apes.newick
blob
|
blame
|
history
|
raw
-rw-r--r--
1811
blat_dna.fa
blob
|
blame
|
history
|
raw
-rw-r--r--
630
cel-cbr-fam.aln
blob
|
blame
|
history
|
raw
-rw-r--r--
3670
codeml.mlc
blob
|
blame
|
history
|
raw
-rw-r--r--
605
coil_protein_input
blob
|
blame
|
history
|
raw
-rw-r--r--
1720
consense.treefile
blob
|
blame
|
history
|
raw
-rwxr-xr-x
2574
cysprot.fa
blob
|
blame
|
history
|
raw
-rw-r--r--
4476
cysprot.msf
blob
|
blame
|
history
|
raw
-rw-r--r--
2950
cysprot.stockholm
blob
|
blame
|
history
|
raw
-rw-r--r--
1121
cysprot1a.fa
blob
|
blame
|
history
|
raw
-rw-r--r--
1931
cysprot1a.msf
blob
|
blame
|
history
|
raw
-rw-r--r--
1451
cysprot1b.fa
blob
|
blame
|
history
|
raw
-rw-r--r--
2469
cysprot1b.msf
blob
|
blame
|
history
|
raw
-rw-r--r--
220
dba1a.fa
blob
|
blame
|
history
|
raw
-rw-r--r--
206
dba1b.fa
blob
|
blame
|
history
|
raw
-rw-r--r--
453
dba2.fa
blob
|
blame
|
history
|
raw
-rw-r--r--
220
dna1.fa
blob
|
blame
|
history
|
raw
-rw-r--r--
581
dna2.fa
blob
|
blame
|
history
|
raw
-rw-r--r--
932
ecolitst.fa
blob
|
blame
|
history
|
raw
-rw-r--r--
443
eponine.fa
blob
|
blame
|
history
|
raw
-rw-r--r--
1360
exonerate_cdna.fa
blob
|
blame
|
history
|
raw
-rw-r--r--
1364
exonerate_cdna_rev.fa
blob
|
blame
|
history
|
raw
-rw-r--r--
3198
exonerate_genomic.fa
blob
|
blame
|
history
|
raw
-rw-r--r--
3209
exonerate_genomic_rev.fa
blob
|
blame
|
history
|
raw
-rw-r--r--
3062
fasta.fa
blob
|
blame
|
history
|
raw
-rw-r--r--
3062
fastalib.fa
blob
|
blame
|
history
|
raw
-rw-r--r--
1029
fastaprot.fa
blob
|
blame
|
history
|
raw
-rw-r--r--
5934
fontfile
blob
|
blame
|
history
|
raw
-rw-r--r--
2316
gf-s85.phylip
blob
|
blame
|
history
|
raw
drwxr-xr-x
-
gumby
tree
|
history
-rw-r--r--
239
hmmpfam_protein_input
blob
|
blame
|
history
|
raw
-rw-r--r--
5468
human.genomic
blob
|
blame
|
history
|
raw
-rw-r--r--
1234
hyphy1.fasta
blob
|
blame
|
history
|
raw
-rw-r--r--
77
hyphy1.tree
blob
|
blame
|
history
|
raw
-rw-r--r--
1811
lagan_dna.fa
blob
|
blame
|
history
|
raw
-rw-r--r--
8483
longnames.aln
blob
|
blame
|
history
|
raw
-rw-r--r--
960
lvb.fa
blob
|
blame
|
history
|
raw
-rw-r--r--
100
lvb_sequential.phy
blob
|
blame
|
history
|
raw
-rw-r--r--
129
neighbor.dist
blob
|
blame
|
history
|
raw
-rw-r--r--
1359
new_dna.fa
blob
|
blame
|
history
|
raw
-rw-r--r--
1030
new_pep.fa
blob
|
blame
|
history
|
raw
-rw-r--r--
13298
njtree_aln2.nucl.mfa
blob
|
blame
|
history
|
raw
-rw-r--r--
46945
pfam_sample_R11
blob
|
blame
|
history
|
raw
-rw-r--r--
126
primate_query.fa
blob
|
blame
|
history
|
raw
-rw-r--r--
897
primate_target.fa
blob
|
blame
|
history
|
raw
-rw-r--r--
45825
prints.dat
blob
|
blame
|
history
|
raw
-rw-r--r--
367
profile_prot.FastA
blob
|
blame
|
history
|
raw
-rw-r--r--
57107
prosite.dat
blob
|
blame
|
history
|
raw
-rw-r--r--
21357
protpars.phy
blob
|
blame
|
history
|
raw
-rw-r--r--
5450
ps1.fa
blob
|
blame
|
history
|
raw
-rw-r--r--
2415
repeatmasker.fa
blob
|
blame
|
history
|
raw
-rw-r--r--
385
road.pep
blob
|
blame
|
history
|
raw
-rw-r--r--
97400
sample_dataset_1.fa
blob
|
blame
|
history
|
raw
-rw-r--r--
570
signalp_input_protein
blob
|
blame
|
history
|
raw
-rw-r--r--
1360
sim4_cdna.fa
blob
|
blame
|
history
|
raw
-rw-r--r--
2720
sim4_database.fa
blob
|
blame
|
history
|
raw
-rw-r--r--
3198
sim4_genomic.fa
blob
|
blame
|
history
|
raw
-rw-r--r--
464
simprot_tree.nh
blob
|
blame
|
history
|
raw
-rw-r--r--
1264
species_tree_njtree.nh
blob
|
blame
|
history
|
raw
drwxr-xr-x
-
taxdump
tree
|
history
-rw-r--r--
573
test.txt
blob
|
blame
|
history
|
raw
-rw-r--r--
534
test_prot.FastA
blob
|
blame
|
history
|
raw
-rw-r--r--
11317
tree_of_life
blob
|
blame
|
history
|
raw
-rw-r--r--
60
treefile.example
blob
|
blame
|
history
|
raw
-rw-r--r--
15424
vista.cls
blob
|
blame
|
history
|
raw
-rw-r--r--
351
vista.gff
blob
|
blame
|
history
|
raw