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Merge branch 'merge_root_into_live'
2015-09-17
Chri
s
Fields
M
e
rge
b
ranch 'mer
g
e_root_into_live'
commit
|
commitdiff
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tree
2015-03-29
Chri
s
Fields
Need to
m
ove the Deobfuscat
o
r
to a se
p
arate
d
i
r
ecto
r
y
.
.
.
commit
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tree
2015-03-29
Chris Fields
modify RTD URL to point
t
o a commo
n
spot, will add
.
.
.
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|
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tree
2015-03-29
C
hris
F
ie
l
ds
add
r
eadthe
d
o
cs badg
e
; will
g
rad
u
ally start migrating
.
.
.
commit
|
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tree
2015-03-25
C
h
r
is Fields
even bet
t
er DOI
commit
|
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tree
2015-03-25
Chris Fields
ad
d
DOI badge from Zenodo
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|
commitdiff
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tree
2015-03-05
Chris Fields
skip tes
t
s wh
e
n
usin
g
perl < 5
.
1
2
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tree
2015-03-05
Chris Fie
l
ds
Merge branch master of github
.
com:b
i
o
p
er
l
/bioperl-l
i
ve
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commitdiff
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tree
2015-03-05
Chr
i
s
Fields
remove
t
est fi
l
e
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|
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tree
2015-03-02
Chris Fie
l
ds
a bit more doc; getting
about 1
0
00
fu
l
l lineage lookups
.
.
.
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|
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tree
2015-03-02
Chris Fields
small profi
l
ing improveme
n
t w/index file
s
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|
commitdiff
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tree
2015-03-02
C
h
ris Fields
bit more docs on todo items
commit
|
commitdiff
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tree
2015-03-01
Chris Fields
all key
t
ests p
a
s
s
(
only a
f
e
w
have
n
't been check
e
d
.
.
.
commit
|
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tree
2015-03-01
Chris F
i
elds
all bu
t
tw
o
t
ests passing
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|
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tree
2015-03-01
Chris Fie
l
ds
t
r
ust y
o
ur
D
B i
m
plementation
,
p
articul
a
rly i
f
ance
s
tor
.
.
.
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|
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tree
2015-03-01
Chris Fiel
d
s
re
m
ov
e
pas
t
o
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|
commitdiff
|
tree
2015-03-01
Chri
s
Field
s
vent
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|
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|
tree
2015-03-01
Chris Fields
S
QLite is has
c
ase-in
s
ens
i
tive LIKE, no
n
e
e
d
for lc
.
.
.
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|
commitdiff
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tree
2015-03-01
Chris Fields
start testing B
i
o:
:
Taxon
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|
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tree
2015-03-01
Chris F
i
elds
implement get_taxids()
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|
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tree
2015-02-28
C
hris Fiel
d
s
get
b
asic tes
t
s, num_taxa
t
est
passing
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|
commitdiff
|
tree
2015-02-28
Chris Fields
tests
(
carr
i
ed over
from Remote
D
B/Tax
o
nomy
.
t so has
.
.
.
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|
commitdiff
|
tree
2015-02-28
Chris Fie
l
ds
ini
t
i
m
plemen
t
ation of nu
m
_
t
axa
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|
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|
tree
2015-02-28
C
hr
i
s Fields
c
om
m
i
t renamed (but
not f
u
l
l
y impl
e
mented) B
i
o::D
B
.
.
.
commit
|
commitdiff
|
tree
2015-02-25
Chri
s
Field
s
small test f
i
x f
o
r
taxonom
y
woes (stop-gap, ne
e
d a
.
.
.
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|
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|
tree
2014-10-29
C
hris Fields
add late
s
t changes to, um, Changes
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|
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2014-10-28
Chris
Field
s
one mo
r
e for changes
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|
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tree
2014-10-28
Chris Fields
d
atabase name ch
a
ng
e
d
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|
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2014-10-28
Chris Fiel
d
s
have to
i
gnore po
s
sibly bad c
e
rt
t
o get th
i
s w
o
rking
.
.
.
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|
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tree
2014-10-28
C
h
ris Fiel
d
s
have to ig
n
ore pos
s
i
bly bad cert
t
o
get this
w
orking
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|
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|
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2014-10-28
Chris
Fie
l
ds
h
ave to ignore poss
i
bly bad cert to get
this work
i
ng
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|
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2014-10-28
Chris F
i
e
l
ds
yep, a
n
other fla
p
py
t
est
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2014-10-28
C
h
ris Field
s
an
o
ther
f
lappy
test
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|
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2014-10-28
C
hris Fields
squa
s
h waffling te
s
t
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|
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2014-10-28
C
hris Fields
minor cle
a
nup
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|
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2014-10-28
Chr
i
s Fields
ad more
updates
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|
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2014-10-27
Chris Fiel
d
s
r
emove debugging
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|
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tree
2014-10-27
C
h
ris
F
ields
doc
u
m
ent mino
r
changes
commit
|
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tree
2014-10-27
C
h
ris F
i
e
lds
bump vers
i
on; th
i
s s
e
ems to be caught by latest M:
.
.
.
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|
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|
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2014-10-26
Chris Fi
e
lds
Merge br
a
nch 'mast
e
r' o
f
githu
b
.
c
om:biope
r
l/bio
p
e
r
l
.
.
.
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|
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2014-10-26
Chris Fie
l
ds
no_index
m
e
a
ns 'do not index
a
ny modules nor ad
d
them
.
.
.
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|
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2014-10-20
Chris
F
ields
ski
p
th
e
s
e
t
e
sts if LWP isn't insta
l
l
e
d
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|
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2014-09-14
Chris F
i
e
l
ds
add 5
.
2
0
(
m
ay re
m
ove 5
.
10 at
s
ome point)
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|
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2014-09-14
Chris Fie
l
ds
add the t
w
o c
y
clic ref tester
s
(no
t
re
q
uired for
g
enera
l
.
.
.
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|
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2014-09-13
Chri
s
Fields
f
i
x test cou
n
t
,
w
hich
f
ails if optional me
m
leak modules
.
.
.
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|
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|
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2014-09-13
Chris Fields
A
dd te
s
ts fo
r
memory lea
k
s and weaken for Issue #81
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|
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2014-08-09
C
h
r
i
s
Fields
Add
t
ravis-ci
b
a
dge
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|
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|
tree
2014-07-11
Chris Fields
sp
i
ce
d
_seq() may need LWP
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|
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2014-07-10
Chris Fields
fix
a
warning
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|
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|
tree
2013-08-09
Ch
r
is Fiel
d
s
M
erge pul
l
r
eques
t
#6
0
f
r
o
m
MattOa
t
es/master
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|
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tree
2012-08-24
Chris Fi
e
lds
Merge
p
ul
l
request #39 from d
a
isie
h
/bug3331
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|
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|
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2012-08-24
Chris Fi
e
lds
Me
r
ge pull request #40 from cwittmer/maste
r
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