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make explicit
2013-07-12
hypha
l
tip
mak
e
exp
l
icit
commit
|
commitdiff
|
tree
2013-07-11
h
y
pha
l
tip
mi
s
si
n
g
request fo
r
ma
r
ker n
a
me in the c
a
ll
commit
|
commitdiff
|
tree
2011-11-15
hyp
h
altip
Merge branch 'master'
of gi
t
hub
.
com:biope
r
l/
b
ioperl
.
.
.
commit
|
commitdiff
|
tree
2011-11-15
hyphal
t
i
p
prot
e
ct whe
n
n
i
s
too small
f
or t
h
e calculation
,
still
.
.
.
commit
|
commitdiff
|
tree
2011-06-22
h
ypha
l
tip
u
se SQLi
t
e instead of DB_
F
ile fo
r
stor
i
ng the gi -
.
.
.
commit
|
commitdiff
|
tree
2011-06-22
hyph
a
ltip
skip lines starting with hash com
m
ent
commit
|
commitdiff
|
tree
2011-06-22
hyphaltip
wa
r
n only
w
he
n
debugging is on
commit
|
commitdiff
|
tree
2011-06-22
hyphaltip
compare evalue to the filter
c
u
tof
f
no
t
to itsself
commit
|
commitdiff
|
tree
2011-05-26
hyphaltip
warn ab
o
u
t
the particular ID that doesn't ex
i
st
commit
|
commitdiff
|
tree
2011-05-24
hyphaltip
Me
r
ge branch 'mast
e
r
'
of git
h
ub
.
com:bi
o
per
l
/bio
p
erl
.
.
.
commit
|
commitdiff
|
tree
2011-05-24
hypha
l
tip
cm
d
line example should have format for -sf op
t
ion
commit
|
commitdiff
|
tree
2011-04-12
hyp
h
altip
small doc ch
a
nge
commit
|
commitdiff
|
tree
2011-04-12
hyph
a
ltip
Merge br
a
nch 'master' of github
.
co
m
:b
i
ope
r
l/bioperl
.
.
.
commit
|
commitdiff
|
tree
2011-04-12
h
y
ph
a
ltip
revert throw stat
m
ent th
a
t
was
p
r
eventing
default
STDOUT
.
.
.
commit
|
commitdiff
|
tree
2011-03-27
hyphaltip
SSL is default for r
e
dmine c
o
nn
e
ction
commit
|
commitdiff
|
tree
2011-03-27
hy
p
haltip
fix some formatting
commit
|
commitdiff
|
tree
2011-03-27
hyph
a
ltip
suppor
t
the SwissPfa
m
indexer
commit
|
commitdiff
|
tree
2011-03-27
hyphalt
i
p
minor formatting
commit
|
commitdiff
|
tree
2011-03-27
hyphaltip
bugzi
l
la -> redmine URL
m
odify
commit
|
commitdiff
|
tree
2011-03-14
hyphaltip
Merg
e
branch 'master
'
of github
.
com:bioperl/bi
o
perl
.
.
.
commit
|
commitdiff
|
tree
2011-03-14
hyphaltip
bug rep
o
r
ted by
se
b
astien
.
the
i
l
@cle
r
mont
.
inr
a
.
fr
-
.
.
.
commit
|
commitdiff
|
tree
2010-12-28
hyphaltip
Merge branch 'mas
t
er' of github
.
com:bi
o
pe
r
l/bioperl
.
.
.
commit
|
commitdiff
|
tree
2010-12-28
hyp
h
altip
missi
n
g comma in SYNPOSIS pdoc
commit
|
commitdiff
|
tree
2010-12-21
hyph
a
ltip
u
s
e the p
r
oper method nam
e
s
- g
e
t_XXX in
s
tead of _each_X
X
X
commit
|
commitdiff
|
tree
2010-12-16
hyphaltip
w
h
en pro
c
essing SSEARCH get the strand info fro
m
the
.
.
.
commit
|
commitdiff
|
tree
2010-12-16
h
yphal
t
ip
matc
h
SSEARCH
commit
|
commitdiff
|
tree
2010-12-10
h
yphaltip
bug #3160 - pcantalu
p
o@gmail for writing the alg
name
.
.
.
commit
|
commitdiff
|
tree
2010-12-10
hyphalt
i
p
tex
t
writer test
commit
|
commitdiff
|
tree