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ported interval statistics to oracle adaptor, but not testedperl -cw Bio/DB/GFF/Adapt...
2010-07-06
Lincoln Stein
ported i
n
terval statistics to oracl
e
adaptor
,
but not
.
.
.
commit
|
commitdiff
|
tree
2010-07-06
Lincoln
S
tein
added interval statistics gather
i
ng to Pg adaptor
commit
|
commitdiff
|
tree
2010-07-06
L
i
ncoln
S
t
ein
added su
m
ma
r
y
m
ode to bio::db::gff mys
q
l adapto
r
commit
|
commitdiff
|
tree
2010-06-29
Lincoln Stein
Me
r
ge branch '
m
aster' of git@github
.
com:
b
ioperl/bioperl
.
.
.
commit
|
commitdiff
|
tree
2010-06-29
Lincoln Stein
a
dded routin
e
s
to fet
c
h
a
ll
s
e
q
i
ds
commit
|
commitdiff
|
tree
2010-06-24
Lincoln Stein
added
_seq_id method to
many SeqFeature::Store d
a
taba
s
es
commit
|
commitdiff
|
tree
2010-06-21
Lincol
n
S
t
e
i
n
Mer
g
e branch 'master' of
g
it
@
github
.
com:biope
r
l
/
b
ioperl
.
.
.
commit
|
commitdiff
|
tree
2010-06-21
Li
n
col
n
Stein
in-memory adaptor
now produces a
w
arn
i
ng i
f
the f
a
sta
.
.
.
commit
|
commitdiff
|
tree
2010-06-10
Lincoln
Stein
seqfeature
s
tore
datab
a
s
e loader
turns on summary statist
i
cs
.
.
.
commit
|
commitdiff
|
tree
2010-06-10
L
incoln Stein
Merge bra
n
ch 'master'
of git@gith
u
b
.
com:bioperl/bioperl
.
.
.
commit
|
commitdiff
|
tree
2010-05-25
Lin
c
oln
S
t
ein
made name searches f
a
s
ter
b
y
pre-low
e
rcasing the na
m
e
.
.
.
commit
|
commitdiff
|
tree
2010-05-24
Linco
l
n Ste
i
n
me
m
ory adap
t
or produc
e
s summ
a
r
y
stat
s
;
ready to
merge
.
.
.
commit
|
commitdiff
|
tree
2010-05-24
L
i
ncoln Stein
don't
a
dd :
b
ins to summary f
e
a
t
ure type; it confu
s
e
s
.
.
.
commit
|
commitdiff
|
tree
2010-05-24
Li
n
coln Stein
berkeley
d
b adapto
r
generating summary statistics more
.
.
.
commit
|
commitdiff
|
tree
2010-05-24
Lincoln Stein
The Berkeley
d
b adaptor is now b
u
ilding su
m
mar
y
status
.
.
.
commit
|
commitdiff
|
tree
2010-05-24
L
i
ncoln Stein
C
l
ean
e
d up summary g
e
ner
a
tion
.
Can generate summ
a
ry
.
.
.
commit
|
commitdiff
|
tree
2010-05-23
Lincoln
Stein
Me
r
ge bra
n
c
h
'lst
e
in-seqfe
a
ture-store-summaries'
of
.
.
.
commit
|
commitdiff
|
tree
2010-05-23
Linco
l
n Stein
my
s
ql ada
p
tor now bu
i
lds summary (cover
a
ge) statistics
.
.
.
commit
|
commitdiff
|
tree
2010-05-21
Lincoln Stein
gene co
v
erage
s
ta
t
s seem to be working,,,basi
c
ally
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