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Merge branch master of github.com:bioperl/bioperl-live
2015-03-05
C
h
ris
F
ields
Merge bra
n
ch mast
e
r of github
.
com:bioper
l
/bioperl-
l
i
ve
commit
|
commitdiff
|
tree
2015-03-05
C
hris Fields
remove test file
commit
|
commitdiff
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tree
2015-03-02
Chr
i
s Fields
a bit more do
c
; gett
i
ng about 1000
fu
l
l lineage lookups
.
.
.
commit
|
commitdiff
|
tree
2015-03-02
Chris
Fields
small pr
o
f
il
i
ng
i
m
p
rovement
w/index
f
iles
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|
commitdiff
|
tree
2015-03-02
Chris Fields
bit more d
o
cs on t
o
do items
commit
|
commitdiff
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tree
2015-03-01
Ch
r
is Fields
all key test
s
pas
s
(
only a few haven't
b
e
en c
h
ecked
.
.
.
commit
|
commitdiff
|
tree
2015-03-01
C
hris Fields
a
ll but t
w
o tests passin
g
commit
|
commitdiff
|
tree
2015-03-01
Chr
i
s Fi
e
lds
trust your
DB implemen
t
ation
,
parti
c
u
l
arly if anc
e
s
tor
.
.
.
commit
|
commitdiff
|
tree
2015-03-01
Chris Fie
l
ds
re
m
ove pasto
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|
commitdiff
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tree
2015-03-01
Ch
r
is Fields
vent
commit
|
commitdiff
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tree
2015-03-01
Chr
i
s Fields
S
Q
Lite is h
a
s case-insen
s
i
t
ive LIKE, no
need for lc
.
.
.
commit
|
commitdiff
|
tree
2015-03-01
Chris
Fields
st
a
rt testing Bio::Taxon
commit
|
commitdiff
|
tree
2015-03-01
Chris F
i
elds
i
mplement get_taxids()
commit
|
commitdiff
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tree
2015-02-28
Chris
F
ields
get bas
i
c tests,
n
um_taxa test
p
assing
commit
|
commitdiff
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tree
2015-02-28
Chris Fields
t
ests
(
carried over from R
e
moteDB/Taxon
o
m
y
.
t so has
.
.
.
commit
|
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tree
2015-02-28
Chris F
i
e
lds
init implement
a
tio
n
of num_taxa
commit
|
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tree
2015-02-28
Chris Fields
commit
r
enamed (bu
t
not fu
l
l
y
implemented) Bio::
D
B
.
.
.
commit
|
commitdiff
|
tree
2015-02-25
Chr
i
s
Fields
small test fix for taxonomy woes
(
stop-gap, need a
.
.
.
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|
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|
tree
2014-10-29
Chris Fields
add
latest changes to, um, Ch
a
n
g
es
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|
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|
tree
2014-10-28
C
hris
Fields
one more for changes
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|
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tree
2014-10-28
Chris Fie
l
ds
database name ch
a
nged
commit
|
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tree
2014-10-28
Chris Fields
have to
i
g
nore possibly bad cert to get this working
.
.
.
commit
|
commitdiff
|
tree
2014-10-28
Ch
r
is Fields
have to ignore p
o
ssib
l
y b
a
d c
e
rt to get
this working
commit
|
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tree
2014-10-28
Chris Fields
hav
e
to ignore possibly
b
ad
c
ert to ge
t
this working
commit
|
commitdiff
|
tree
2014-10-28
C
hris F
i
elds
yep, another flappy tes
t
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|
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tree
2014-10-28
C
hris Fields
anothe
r
fla
p
py
t
est
commit
|
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|
tree
2014-10-28
Chris Fie
l
ds
squash waffl
i
ng
t
est
commit
|
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|
tree
2014-10-28
Chris
F
i
e
l
ds
minor cleanup
commit
|
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|
tree
2014-10-28
C
hr
i
s Fields
ad more updates
commit
|
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|
tree
2014-10-27
Chris F
i
elds
r
emove
d
ebugging
commit
|
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|
tree
2014-10-27
Chris Fields
do
c
u
m
en
t
minor
c
hanges
commit
|
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tree
2014-10-27
Chris
Fiel
d
s
bump version;
this seems
t
o be caught by late
s
t M
:
.
.
.
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|
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2014-10-26
Chris Fi
e
lds
Merge branch '
m
aster' of git
h
ub
.
c
o
m:bioperl/bio
p
erl
.
.
.
commit
|
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|
tree
2014-10-26
Chri
s
Fields
no
_
index means 'do not i
n
dex any modu
l
es
nor add them
.
.
.
commit
|
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2014-10-20
C
h
ris
F
ield
s
skip these tests if LWP isn'
t
installed
commit
|
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2014-09-14
Chris Fields
add 5
.
20 (may
remove 5
.
10 at some
point)
commit
|
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2014-09-14
Chris
F
ields
ad
d
the two cycli
c
ref test
e
rs (not required for gene
r
a
l
.
.
.
commit
|
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|
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2014-09-13
Chris Fields
f
i
x
t
est count
,
w
hich fail
s
if
optional mem lea
k
m
odule
s
.
.
.
commit
|
commitdiff
|
tree
2014-09-13
Ch
r
is Field
s
Add tests
f
or m
e
mory leaks and weaken for Issue #8
1
commit
|
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|
tree
2014-08-09
Chr
i
s
F
ields
Add t
r
avis-ci
badge
commit
|
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|
tree
2014-07-11
Chris Fields
s
p
iced_seq() may need LWP
commit
|
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|
tree
2014-07-10
Chris
F
i
elds
fix a wa
r
ning
commit
|
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|
tree
2013-08-09
Chri
s
Fields
Mer
g
e pull req
u
est #60
fro
m
M
at
t
Oa
t
es/ma
s
ter
commit
|
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|
tree
2012-08-24
Chris Fields
Merge
pull re
q
uest #3
9
from daisi
e
h/bug3331
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|
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2012-08-24
Ch
r
is Fields
Merge pull request
#
40 from cwittmer/master
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