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Back this out, related tests are failing
2013-07-16
B
ria
n
Osborne
Back
t
his out
,
r
ela
t
ed te
s
ts are failing
commit
|
commitdiff
|
tree
2013-07-16
B
rian
O
s
b
o
r
n
e
Add s
t
rand(
)
so
n
hmmer can ge
t
s
trand data
commit
|
commitdiff
|
tree
2013-07-16
Brian Osborne
Ad
d
partial support for nhmmer (versi
o
n 3
.
1)
commit
|
commitdiff
|
tree
2013-03-31
Bria
n
Osbor
n
e
Bug 34
1
5
commit
|
commitdiff
|
tree
2013-03-28
Bria
n
O
s
borne
Merge branch 'mast
e
r' o
f
g
i
thub
.
co
m
:bioperl
/
biope
r
l
.
.
.
commit
|
commitdiff
|
tree
2013-03-28
Bria
n
Osb
o
rne
Add
d
n
a_to_aa_a
l
n
m
e
thod and
t
e
sts
commit
|
commitdiff
|
tree
2013-03-26
Bri
a
n Osb
o
rn
e
Merge
b
ranch 'master'
of gi
t
hu
b
.
com:bioperl/biop
e
rl
.
.
.
commit
|
commitdiff
|
tree
2013-03-26
Brian Osborne
A
dd support for
version 4, all test
s
pa
s
s
commit
|
commitdiff
|
tree
2013-03-08
Brian Osborne
Me
r
ge branc
h
'
m
aster' of github
.
co
m
:biop
e
rl/bioper
l
.
.
.
commit
|
commitdiff
|
tree
2013-03-08
B
r
ian Osborne
B
io::AlignIO::fasta was not always us
i
ng />\s*(
\
S+
.
.
.
commit
|
commitdiff
|
tree
2013-01-06
B
rian Osb
o
rne
Update, co
r
r
e
ct
commit
|
commitdiff
|
tree
2013-01-05
Brian Osborne
Tidy
and corre
c
t
d
ocs
commit
|
commitdiff
|
tree
2012-02-29
B
ria
n
Osborn
e
Fix typos
commit
|
commitdiff
|
tree
2012-02-28
Brian Osb
o
rne
Remove Node fr
o
m 'use base', it's
u
nnecessa
r
y
commit
|
commitdiff
|
tree
2012-02-22
B
rian Osborn
e
Nodes need the new() meth
o
d
commit
|
commitdiff
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tree
2012-02-02
Brian Osb
o
r
n
e
Clarify the POD a bit
commit
|
commitdiff
|
tree
2012-02-02
Br
i
an Osbo
r
ne
D
oc
e
xample
commit
|
commitdiff
|
tree
2012-02-02
B
r
i
a
n Osborne
Typ
o
s
commit
|
commitdiff
|
tree
2012-01-23
Br
i
an Osborne
Merge branch 'master' of github
.
com:bioperl/bioperl
.
.
.
commit
|
commitdiff
|
tree
2012-01-23
B
ri
a
n Osbor
n
e
C
reate a unique
usi
n
g th
e
pe
r
cent
commit
|
commitdiff
|
tree
2011-12-09
Brian Osbo
r
ne
Merge branch 'mas
t
e
r
' of github
.
co
m
:bioperl/bioperl
.
.
.
commit
|
commitdiff
|
tree
2011-11-25
Brian
O
sborn
e
M
e
rge b
r
anch 'master' of gi
t
hub
.
com:bi
o
perl/bioperl
.
.
.
commit
|
commitdiff
|
tree
2011-11-14
Brian Osbor
n
e
Merge branch 'master' of githu
b
.
com:bioperl/bio
p
erl
.
.
.
commit
|
commitdiff
|
tree
2011-10-10
Brian Osb
o
rne
Merge branch 'master
'
of github
.
com
:
bioperl/bioperl
.
.
.
commit
|
commitdiff
|
tree
2011-10-07
B
rian
Osborn
e
Fix h
s
p_len
g
th(),
it w
a
s
r
eturning twice the length
.
.
.
commit
|
commitdiff
|
tree
2011-09-21
Brian Osborne
P
OD f
i
xes
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|
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|
tree
2011-09-20
Brian Osbo
r
ne
POD
f
ixes
commit
|
commitdiff
|
tree
2011-09-20
B
rian
O
sborne
A
dd s
o
me exam
p
le URL
s
, will add a test when CUTG co
r
r
e
c
ts
.
.
.
commit
|
commitdiff
|
tree
2011-09-06
Brian
Osborne
Merge br
a
n
ch 'master' of g
i
thub
.
com:bioperl/biope
r
l
.
.
.
commit
|
commitdiff
|
tree
2011-09-06
Brian Osborne
Typo
commit
|
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|
tree
2011-08-25
Br
i
a
n Osborne
Comment out
l
ines
i
n
FTHel
p
er that convert s
p
ecific
.
.
.
commit
|
commitdiff
|
tree
2011-07-05
B
rian Osborne
Minor
e
dits to
d
ocs
commit
|
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|
tree
2011-07-03
Brian Osborne
Stockholm
.
p
m
did not work,
f
ixed n
o
w
.
Add
tests
.
Make
.
.
.
commit
|
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|
tree
2011-07-01
Bria
n
O
sborne
Add
t
est for RPS-BLAST al
g
orithm
commit
|
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|
tree
2011-06-24
Brian Osborne
Merge branch 'ma
s
ter' of github
.
com:b
i
op
e
rl/bioperl
.
.
.
commit
|
commitdiff
|
tree
2011-06-24
Brian Osborne
D
o
n't res
t
rict just
to
C
DS features, the feature
ma
y
.
.
.
commit
|
commitdiff
|
tree
2011-06-22
Brian Osbor
n
e
M
erge branch
'mast
e
r' of github
.
com:bioperl/biop
e
r
l
.
.
.
commit
|
commitdiff
|
tree
2011-06-22
B
r
i
a
n Osborn
e
Im
p
lement w
r
ite
_
feat
u
re()
i
n FeatureIO::
p
t
t
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|
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