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Back this out, related tests are failing
2013-07-16
Bria
n
Osbo
r
ne
Back
this
o
ut, related
t
ests are faili
n
g
commit
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commitdiff
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tree
2013-07-16
Brian Osborne
A
d
d strand() so nhmm
e
r can get strand
dat
a
commit
|
commitdiff
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tree
2013-07-16
B
r
ian Osborne
Add partial sup
p
o
r
t for
nhmme
r
(version 3
.
1)
commit
|
commitdiff
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tree
2013-03-31
Brian Osborne
Bug 3415
commit
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commitdiff
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tree
2013-03-28
Brian Osborne
Merg
e
br
a
nch 'master' o
f
github
.
com:biope
r
l/bi
o
perl
.
.
.
commit
|
commitdiff
|
tree
2013-03-28
Bri
a
n
O
sborne
A
d
d dna_to_aa_aln method
a
nd tests
commit
|
commitdiff
|
tree
2013-03-26
Brian O
s
borne
Me
r
ge
b
r
anch 'master'
o
f github
.
c
om:b
i
operl/bio
p
erl
.
.
.
commit
|
commitdiff
|
tree
2013-03-26
Bri
a
n Osbor
n
e
Add supp
o
rt for ver
s
i
on 4, a
l
l
tests pass
commit
|
commitdiff
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tree
2013-03-08
B
rian Osb
o
r
ne
M
erg
e
b
ra
n
ch 'mas
t
er' of g
i
thub
.
c
om:bioperl/biope
r
l
.
.
.
commit
|
commitdiff
|
tree
2013-03-08
Brian Osborne
Bio::
A
lignIO::fa
s
t
a
w
a
s not al
w
ay
s
using />\s*(\S+
.
.
.
commit
|
commitdiff
|
tree
2013-01-06
B
r
ian
Osborne
Update, correct
commit
|
commitdiff
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tree
2013-01-05
B
rian O
s
borne
Tidy and
correct
docs
commit
|
commitdiff
|
tree
2012-02-29
B
rian Osborne
Fix typos
commit
|
commitdiff
|
tree
2012-02-28
Brian Osbor
n
e
Remove N
o
de f
r
o
m '
u
se
base'
,
i
t
's unnecessary
commit
|
commitdiff
|
tree
2012-02-22
Br
i
an Osborne
Nodes ne
e
d
the ne
w
() meth
o
d
commit
|
commitdiff
|
tree
2012-02-02
B
r
ian
O
s
borne
C
l
arify the POD a bit
commit
|
commitdiff
|
tree
2012-02-02
Bri
a
n Os
b
orne
D
o
c example
commit
|
commitdiff
|
tree
2012-02-02
Br
i
an
O
sborne
Ty
p
o
s
commit
|
commitdiff
|
tree
2012-01-23
Bri
a
n Osborne
Merge branch 'mast
e
r' of
g
i
thu
b
.
c
om:b
i
operl/bioperl
.
.
.
commit
|
commitdiff
|
tree
2012-01-23
Brian Osborne
Create a
u
nique using
th
e
percent
commit
|
commitdiff
|
tree
2011-12-09
Brian Os
b
orne
M
erge branch 'master'
of git
h
ub
.
com:biop
e
rl/bioperl
.
.
.
commit
|
commitdiff
|
tree
2011-11-25
Brian Osbor
n
e
Me
r
g
e branch 'ma
s
ter'
of github
.
com:
b
i
o
perl/bioperl
.
.
.
commit
|
commitdiff
|
tree
2011-11-14
Brian Osborne
Merge branch
'mas
t
er'
o
f
g
ith
u
b
.
com
:
bioperl/bioperl
.
.
.
commit
|
commitdiff
|
tree
2011-10-10
Brian Osborne
Merge branch 'master'
of
github
.
com:bio
p
e
r
l/bioper
l
.
.
.
commit
|
commitdiff
|
tree
2011-10-07
Brian Osborne
Fi
x
hsp_length()
,
it was re
t
urning tw
i
c
e
t
he length
.
.
.
commit
|
commitdiff
|
tree
2011-09-21
Brian Osb
o
rne
POD fi
x
es
commit
|
commitdiff
|
tree
2011-09-20
Brian Osborne
POD fixes
commit
|
commitdiff
|
tree
2011-09-20
B
r
i
an Osborne
A
dd some example U
R
Ls, will add
a test when CUTG corrects
.
.
.
commit
|
commitdiff
|
tree
2011-09-06
Bri
a
n
Osbor
n
e
M
e
r
ge branch 'master
'
o
f
github
.
com
:
bioperl/bioperl
.
.
.
commit
|
commitdiff
|
tree
2011-09-06
Brian Os
b
orne
Typo
commit
|
commitdiff
|
tree
2011-08-25
Brian Osborne
Comment out line
s
in
F
THe
l
per th
a
t c
o
nvert sp
e
cific
.
.
.
commit
|
commitdiff
|
tree
2011-07-05
Brian Osborne
M
inor edits to d
o
cs
commit
|
commitdiff
|
tree
2011-07-03
B
rian Osborne
Stockholm
.
pm d
i
d no
t
work, fix
e
d now
.
Add tests
.
Make
.
.
.
commit
|
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|
tree
2011-07-01
Brian
O
s
b
o
r
ne
Add test for
R
PS-BLAST alg
o
rithm
commit
|
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|
tree
2011-06-24
Bri
a
n Osbor
n
e
Merg
e
branch
'
master' of gith
u
b
.
c
om:biope
r
l/bioperl
.
.
.
commit
|
commitdiff
|
tree
2011-06-24
Brian Os
b
orn
e
D
on't restr
i
ct just to CDS features,
t
h
e feature may
.
.
.
commit
|
commitdiff
|
tree
2011-06-22
Brian Osborne
Merge branch 'ma
s
ter'
o
f github
.
com:bioperl/
b
ioperl
.
.
.
commit
|
commitdiff
|
tree
2011-06-22
Brian Osbo
r
ne
Imp
l
e
m
ent write_feature() in
F
eatu
r
eIO::ptt
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|
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|
tree
2010-05-27
B
r
i
an Osborne
Re
m
o
ve unused Bio/
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