| commit | a73febe952c50b92f44a4693a7f13e12589c6b10 | |
| author | David Miguel Susano Pinto <carandraug+dev@gmail.com> | |
| Fri, 26 Apr 2024 00:50:04 +0000 (26 01:50 +0100) | ||
| committer | David Miguel Susano Pinto <carandraug+dev@gmail.com> | |
| Fri, 26 Apr 2024 01:02:11 +0000 (26 02:02 +0100) | ||
| tree | 92db180488904929d973f165ffb569df2a6096f8 | treesnapshot (tar.gz zip) |
| parent | e2273cd6bca3e55f16bb450675be6853222aac97 | commitdiff |
Bio::Tools::CodonTable: include and parse the gc.prt file (#391)
To make it simpler to keep things up to date, just include the gc.prt
(the NCBI data file of codon tables in ASN.1 print format) below
__DATA__ and parse it. The file is very small and parsing it is very
quick.
We can't read DATA in a BEGIN block so this also changes the BEGIN
into a INIT block. I'm not sure why the code there needs to be inside
them though.
To make it simpler to keep things up to date, just include the gc.prt
(the NCBI data file of codon tables in ASN.1 print format) below
__DATA__ and parse it. The file is very small and parsing it is very
quick.
We can't read DATA in a BEGIN block so this also changes the BEGIN
into a INIT block. I'm not sure why the code there needs to be inside
them though.
| lib/Bio/Tools/CodonTable.pm | diffblobblamehistory | |
| t/SeqTools/CodonTable.t | diffblobblamehistory |