sync with main trunk
commitbc433bc50f498d8a5dd4815abb39533e88cf04a7
authorcjfields <cjfields@bioperl.org>
Wed, 16 Sep 2009 04:27:51 +0000 (16 04:27 -0000)
committercjfields <cjfields@bioperl.org>
Wed, 16 Sep 2009 04:27:51 +0000 (16 04:27 -0000)
tree2c7556922616aa2cf1f2e96b597d547797003182
parentfe3cba635c0c92e1d240d3f1cb98dad78700ff7f
sync with main trunk

svn path=/bioperl-live/branches/branch-1-6/; revision=16103
19 files changed:
Bio/SimpleAlign.pm
Changes
t/Align/SimpleAlign.t
t/SearchIO/exonerate.t
t/SearchIO/fasta.t
t/SearchIO/psl.t
t/Seq/Quality.t
t/bugzilla/2346/in.t [deleted file]
t/bugzilla/2537/in.t [deleted file]
t/bugzilla/2842/mask.t [deleted file]
t/bugzilla/2844/note.txt [deleted file]
t/bugzilla/2847/bug.t [deleted file]
t/bugzilla/2850/bug.t [deleted file]
t/bugzilla/README [deleted file]
t/data/exonerate.output.dontwork [moved from t/bugzilla/2346/exonerate.output.dontwork with 100% similarity]
t/data/exonerate.output.works [moved from t/bugzilla/2346/exonerate.output.works with 100% similarity]
t/data/headerless.psl [moved from t/bugzilla/2850/headerless.psl with 100% similarity]
t/data/in.fasta [moved from t/bugzilla/2537/in.fasta with 100% similarity]
t/data/test_clear_range.fastq [moved from t/bugzilla/2847/test_clear_range.fastq with 100% similarity]