| commit | 8d4cc1b26d35a524986fe5b4ee724806298241dc | |
| author | Francisco J. Ossandon <fco.j.ossandon@gmail.com> | |
| Sun, 16 Nov 2014 23:56:55 +0000 (16 20:56 -0300) | ||
| committer | Francisco J. Ossandon <fco.j.ossandon@gmail.com> | |
| Sun, 16 Nov 2014 23:56:55 +0000 (16 20:56 -0300) | ||
| tree | 7e09c735436858ecba19eea098244d50d85a546d | treesnapshot (tar.gz zip) |
| parent | 16981eaf655402ae6ba5e14c495cdb4f914f972f | commitdiff |
CodonTable.pm: Fix for issue #90. Added new codon tables 24 & 25 and
moved special 'Strict' table to ID 0, so it don't interfere with
new tables in the future. Deleted a dead link and updated other
tables according to the latest definitions. Since ID 0 now exists
and is used by 'Strict', the 'id' subroutine now returns 1
(standard table) for invalid specified ids (besides the warning).
Also fixed some indentations.
CodonTable.t: Added tests to cover all the changes plus a few extras
to improve code coverage after looking Coveralls report.
moved special 'Strict' table to ID 0, so it don't interfere with
new tables in the future. Deleted a dead link and updated other
tables according to the latest definitions. Since ID 0 now exists
and is used by 'Strict', the 'id' subroutine now returns 1
(standard table) for invalid specified ids (besides the warning).
Also fixed some indentations.
CodonTable.t: Added tests to cover all the changes plus a few extras
to improve code coverage after looking Coveralls report.
| Bio/Tools/CodonTable.pm | diffblobblamehistory | |
| t/SeqTools/CodonTable.t | diffblobblamehistory |