| commit | 766704224977e4ef546ed52a972fab4cec05dc07 | |
| author | Francisco J. Ossandon <fco.j.ossandon@gmail.com> | |
| Wed, 8 Jan 2014 20:31:53 +0000 (8 17:31 -0300) | ||
| committer | Francisco J. Ossandon <fco.j.ossandon@gmail.com> | |
| Wed, 8 Jan 2014 20:31:53 +0000 (8 17:31 -0300) | ||
| tree | 1dee23b21efc3280d289ecf4e2d8532c6ca02052 | treesnapshot (tar.gz zip) |
| parent | 35067868ce25dfbbefcb614a5c8289a7f45faa9a | commitdiff |
Hmmer3: Fixed wrong capture of homology line from alignment
when it had flanking whitespaces. Added the calculation
of HSP alignment length, and number of identical and conserved
residues directly from the homology line. Also added several
tests to check for these new features.
when it had flanking whitespaces. Added the calculation
of HSP alignment length, and number of identical and conserved
residues directly from the homology line. Also added several
tests to check for these new features.
| Bio/SearchIO/hmmer3.pm | diffblobblamehistory | |
| t/SearchIO/hmmer.t | diffblobblamehistory |