| commit | 71c4c49eea634a229e743457afd7cb0d0383c674 | |
| author | gantzgraf <gantzgraf@users.noreply.github.com> | |
| Tue, 31 Mar 2015 11:15:04 +0000 (31 12:15 +0100) | ||
| committer | gantzgraf <gantzgraf@users.noreply.github.com> | |
| Tue, 31 Mar 2015 11:15:04 +0000 (31 12:15 +0100) | ||
| tree | fac3a4102eb9d51bd6c8c63e5b4c390b7009073e | treesnapshot (tar.gz zip) |
| parent | 3b932458f70dbce666f18bffa2c4943959f38112 | commitdiff |
Stop masking $seq variable in entrezgene.pm next_seq
$seq is decalared at line 151 so that it doesn't have to be passed as an argument to subs. However, at line 199, in the next_seq sub, $seq is declared again such that the original $seq variable is never defined. This works in practice until you run into a variable without a tagname and try to throw the warning at line 571 where you end up dying with an error when trying to call method 'id' on an undefined variable.
$seq is decalared at line 151 so that it doesn't have to be passed as an argument to subs. However, at line 199, in the next_seq sub, $seq is declared again such that the original $seq variable is never defined. This works in practice until you run into a variable without a tagname and try to throw the warning at line 571 where you end up dying with an error when trying to call method 'id' on an undefined variable.
| Bio/SeqIO/entrezgene.pm | diffblobblamehistory |