Hmmer3: Final fix for Bug #3369. Eliminated the removal of
commit31302bc85724add21279152284a47c7e8a46e7c1
authorFrancisco J. Ossandon <fco.j.ossandon@gmail.com>
Mon, 6 Jan 2014 04:36:59 +0000 (6 01:36 -0300)
committerFrancisco J. Ossandon <fco.j.ossandon@gmail.com>
Mon, 6 Jan 2014 04:36:59 +0000 (6 01:36 -0300)
treedceb5b0146e9c7e60a085bf4984ffa687ed042ba
parentb45ab1ce8503cefa154913cdbf9f4baa03893170
Hmmer3: Final fix for Bug #3369. Eliminated the removal of
"inclusion threshold" hits to allow the user to decide.
Also fixed the bug caused by Hmmscan and Hmmsearch reversing
not only the hit and query lines in the alignment, but also
the start-end of Query and Hit. Added more tests.
Bio/SearchIO/hmmer3.pm
t/SearchIO/hmmer.t
t/data/hmmsearch3_multi.out [new file with mode: 0644]