| commit | 244ba412853bef84a1ab899d755f5a2b764edbca | |
| author | Duke Leto <jonathan@leto.net> | |
| Fri, 16 Jul 2010 20:55:45 +0000 (16 13:55 -0700) | ||
| committer | Robert Buels <rmb32@cornell.edu> | |
| Tue, 20 Jul 2010 02:02:18 +0000 (19 19:02 -0700) | ||
| tree | 52e8336ad266590b778e6db8bb4ec0f662e3b04e | treesnapshot (tar.gz zip) |
| parent | 8ecdf9043b15e07313de93dbb17f6b4b2ef50c93 | commitdiff |
Fix bug which prevents the parsing of the InterPro XML file
Currently the code does not check if subject_term or object_term are undef before
calling methods on them, so parsing the interpo.xml from ftp://ftp.ebi.ac.uk/pub/databases/interpro/
fails with calling a method on an undefined value.
I ran xmllint on the interpro.xml and it does indeed seem to be valid according to the DTD.
Currently the code does not check if subject_term or object_term are undef before
calling methods on them, so parsing the interpo.xml from ftp://ftp.ebi.ac.uk/pub/databases/interpro/
fails with calling a method on an undefined value.
I ran xmllint on the interpro.xml and it does indeed seem to be valid according to the DTD.
| Bio/Ontology/SimpleOntologyEngine.pm | diffblobblamehistory |