| commit | 2413a3983d7c209f52d572b7a0c2db02b31bc45a | |
| author | Chris Fields <cjfields@bioperl.org> | |
| Thu, 16 Jun 2011 05:38:08 +0000 (16 00:38 -0500) | ||
| committer | Chris Fields <cjfields@bioperl.org> | |
| Thu, 16 Jun 2011 05:38:08 +0000 (16 00:38 -0500) | ||
| tree | dd266711eef5d72db47195e968f56449b5745cfd | treesnapshot (tar.gz zip) |
| parent | 0085f50f395f9f4f89b188a67d087fe15badc646 | commitdiff |
* add code to Bio::DB::Fasta that allows blank lines between sequences and headers but not within sequences
* add tests checking indexed seqs for proper output and catching bad sequences with internal blank lines
* possibly fixes but refs bug #3237 (may need reversion if overly problematic)
* add tests checking indexed seqs for proper output and catching bad sequences with internal blank lines
* possibly fixes but refs bug #3237 (may need reversion if overly problematic)
| Bio/DB/Fasta.pm | diffblobblamehistory | |
| t/LocalDB/DBFasta.t | diffblobblamehistory | |
| t/data/badfasta.fa | [new file with mode: 0644] | blob |
| t/data/spaced_fasta.fa | [new file with mode: 0644] | blob |