| commit | 1f0121c3bbbff4285b7786ab41ae2e3686c8947d | |
| author | birney <birney@bioperl.org> | |
| Fri, 11 Dec 1998 15:24:35 +0000 (11 15:24 -0000) | ||
| committer | birney <birney@bioperl.org> | |
| Fri, 11 Dec 1998 15:24:35 +0000 (11 15:24 -0000) | ||
| tree | 840b54043f86f887b669edb7c44f74655e0f945d | treesnapshot (tar.gz zip) |
This commit was generated by cvs2svn to compensate for changes in r2,
which included commits to RCS files with non-trunk default branches.
svn path=/bioperl-live/trunk/; revision=775
which included commits to RCS files with non-trunk default branches.
svn path=/bioperl-live/trunk/; revision=775
112 files changed:
| Bio/Parse.pm | [new file with mode: 0644] | blob |
| Bio/Root/Err.pm | [new file with mode: 0644] | blob |
| Bio/Root/Global.pm | [new file with mode: 0644] | blob |
| Bio/Root/IOManager.pm | [new file with mode: 0644] | blob |
| Bio/Root/Object.pm | [new file with mode: 0644] | blob |
| Bio/Root/Utilities.pm | [new file with mode: 0644] | blob |
| Bio/Root/Vector.pm | [new file with mode: 0644] | blob |
| Bio/Root/Xref.pm | [new file with mode: 0644] | blob |
| Bio/Seq.pm | [new file with mode: 0644] | blob |
| Bio/SimpleAlign.pm | [new file with mode: 0644] | blob |
| Bio/Tools/AlignFactory.pm | [new file with mode: 0644] | blob |
| Bio/Tools/Blast.pm | [new file with mode: 0644] | blob |
| Bio/Tools/Blast/CHANGES | [new file with mode: 0644] | blob |
| Bio/Tools/Blast/HSP.pm | [new file with mode: 0644] | blob |
| Bio/Tools/Blast/HTML.pm | [new file with mode: 0644] | blob |
| Bio/Tools/Blast/Run/LocalBlast.pm | [new file with mode: 0644] | blob |
| Bio/Tools/Blast/Run/Makefile.PL | [new file with mode: 0755] | blob |
| Bio/Tools/Blast/Run/Webblast.pm | [new file with mode: 0644] | blob |
| Bio/Tools/Blast/Run/postclient.pl | [new file with mode: 0755] | blob |
| Bio/Tools/Blast/Sbjct.pm | [new file with mode: 0644] | blob |
| Bio/Tools/Fasta.pm | [new file with mode: 0644] | blob |
| Bio/Tools/RestrictionEnzyme.pm | [new file with mode: 0644] | blob |
| Bio/Tools/SeqAnal.pm | [new file with mode: 0644] | blob |
| Bio/Tools/SeqPattern.pm | [new file with mode: 0644] | blob |
| Bio/Tools/WWW.pm | [new file with mode: 0644] | blob |
| Bio/Tools/pSW.pm | [new file with mode: 0644] | blob |
| Bio/UnivAln.pm | [new file with mode: 0644] | blob |
| Changes | [new file with mode: 0644] | blob |
| MANIFEST | [new file with mode: 0644] | blob |
| MANIFEST.SKIP | [new file with mode: 0644] | blob |
| Makefile.PL | [new file with mode: 0755] | blob |
| PLATFORMS | [new file with mode: 0644] | blob |
| README | [new file with mode: 0644] | blob |
| bioperl.lisp | [new file with mode: 0644] | blob |
| bioperl.pod | [new file with mode: 0644] | blob |
| examples/blast/blast_config.pl | [new file with mode: 0755] | blob |
| examples/blast/blast_seq.pl | [new file with mode: 0755] | blob |
| examples/blast/example.table1 | [new file with mode: 0644] | blob |
| examples/blast/example.table2 | [new file with mode: 0644] | blob |
| examples/blast/html.pl | [new file with mode: 0755] | blob |
| examples/blast/out/blastn.2.gz | [new file with mode: 0644] | blob |
| examples/blast/out/blastn.2.wu.gz | [new file with mode: 0644] | blob |
| examples/blast/out/blastp.1.gcg.gz | [new file with mode: 0644] | blob |
| examples/blast/out/blastp.1.gz | [new file with mode: 0644] | blob |
| examples/blast/out/blastp.2.gz | [new file with mode: 0644] | blob |
| examples/blast/out/blastp.2.nogap.gz | [new file with mode: 0644] | blob |
| examples/blast/out/blastp.2.wu | [new file with mode: 0644] | blob |
| examples/blast/out/blastp.205.gz | [new file with mode: 0644] | blob |
| examples/blast/out/blastp.2a.gz | [new file with mode: 0644] | blob |
| examples/blast/out/blastp.2b.gz | [new file with mode: 0644] | blob |
| examples/blast/out/blastp.email.html.gz | [new file with mode: 0644] | blob |
| examples/blast/out/blastx.2 | [new file with mode: 0644] | blob |
| examples/blast/out/blastx.2.email.gz | [new file with mode: 0644] | blob |
| examples/blast/parse.pl | [new file with mode: 0755] | blob |
| examples/blast/parse2.pl | [new file with mode: 0755] | blob |
| examples/blast/parse_multi.pl | [new file with mode: 0755] | blob |
| examples/blast/parse_positions.pl | [new file with mode: 0755] | blob |
| examples/blast/parse_stream.pl | [new file with mode: 0755] | blob |
| examples/blast/print_blasts.pl | [new file with mode: 0755] | blob |
| examples/blast/run.pl | [new file with mode: 0755] | blob |
| examples/blast/seq/seqs.fasta | [new file with mode: 0644] | blob |
| examples/blast/seq/yal011w.dna.fasta | [new file with mode: 0644] | blob |
| examples/blast/seq/yel009c.fasta | [new file with mode: 0644] | blob |
| examples/blast/seq/ymr284w.fasta | [new file with mode: 0644] | blob |
| examples/blosum62.bla | [new file with mode: 0644] | blob |
| examples/gon250.bla | [new file with mode: 0644] | blob |
| examples/psw.pl | [new file with mode: 0755] | blob |
| examples/restriction.pl | [new file with mode: 0755] | blob |
| examples/rev_and_trans.pl | [new file with mode: 0755] | blob |
| examples/root_object/Bar.pm | [new file with mode: 0644] | blob |
| examples/root_object/Foo.pm | [new file with mode: 0644] | blob |
| examples/root_object/Outer.pm | [new file with mode: 0644] | blob |
| examples/root_object/destroy.pl | [new file with mode: 0755] | blob |
| examples/root_object/error.out | [new file with mode: 0644] | blob |
| examples/root_object/error.pl | [new file with mode: 0755] | blob |
| examples/root_object/filehandle.out | [new file with mode: 0644] | blob |
| examples/root_object/filehandle.pl | [new file with mode: 0755] | blob |
| examples/root_object/io.out | [new file with mode: 0644] | blob |
| examples/root_object/io.pl | [new file with mode: 0755] | blob |
| examples/root_object/read.pl | [new file with mode: 0755] | blob |
| examples/root_object/read.test | [new file with mode: 0644] | blob |
| examples/root_object/read.test2 | [new file with mode: 0644] | blob |
| examples/root_object/read.test3 | [new file with mode: 0644] | blob |
| examples/root_object/utilities.pl | [new file with mode: 0755] | blob |
| examples/root_object/vector/Person.pm | [new file with mode: 0644] | blob |
| examples/root_object/vector/PersonManager.pm | [new file with mode: 0644] | blob |
| examples/root_object/vector/vector.out | [new file with mode: 0644] | blob |
| examples/root_object/vector/vector.pl | [new file with mode: 0755] | blob |
| examples/seq/id.list | [new file with mode: 0644] | blob |
| examples/seq/seq.fasta.gz | [new file with mode: 0644] | blob |
| examples/seq/seq1.fasta | [new file with mode: 0644] | blob |
| examples/seq/seq2.fasta | [new file with mode: 0644] | blob |
| examples/seq/seqs1.pl | [new file with mode: 0755] | blob |
| examples/seq/seqs2.pl | [new file with mode: 0755] | blob |
| examples/seq/seqs3.pl | [new file with mode: 0755] | blob |
| examples/seq/seqs4.pl | [new file with mode: 0755] | blob |
| examples/seq/seqtools.pl | [new file with mode: 0755] | blob |
| examples/seq_pattern.pl | [new file with mode: 0755] | blob |
| examples/simplealign.pl | [new file with mode: 0755] | blob |
| t/Blast.t | [new file with mode: 0644] | blob |
| t/Fasta.t | [new file with mode: 0644] | blob |
| t/HSP.t | [new file with mode: 0644] | blob |
| t/HTML.t | [new file with mode: 0644] | blob |
| t/RestrictionEnzyme.t | [new file with mode: 0644] | blob |
| t/Sbjct.t | [new file with mode: 0644] | blob |
| t/Seq.t | [new file with mode: 0644] | blob |
| t/SeqAnal.t | [new file with mode: 0644] | blob |
| t/SimpleAlign.t | [new file with mode: 0644] | blob |
| t/UnivAln.t | [new file with mode: 0644] | blob |
| t/WWW.t | [new file with mode: 0644] | blob |
| t/blast.report | [new file with mode: 0644] | blob |
| t/expected.blast.out | [new file with mode: 0644] | blob |