| commit | 1ef6600ac4fef830844a86ea44afe8aa18d465ec | |
| author | Chris Fields <cjfields@bioperl.org> | |
| Tue, 18 Jan 2011 17:52:40 +0000 (18 11:52 -0600) | ||
| committer | Chris Fields <cjfields@bioperl.org> | |
| Tue, 18 Jan 2011 17:52:40 +0000 (18 11:52 -0600) | ||
| tree | 21b7daef1fc281f879f2a9244752c2aa4cec2994 | treesnapshot (tar.gz zip) |
| parent | 53a0361e42fa6cad0afe2ecbbe404a84b5ecb657 | commitdiff |
rectify a conflict in behavior between PrimarySeq::translate and CodonTable::translate(); sequences to be translated are not automatically assumed to be codons, add a flag (-complete_codons) that allows partial codons to be translated, but off by default (thanks to Amir Karger for pointing this out)
| Bio/PrimarySeqI.pm | diffblobblamehistory | |
| Bio/Tools/CodonTable.pm | diffblobblamehistory | |
| t/Seq/Seq.t | diffblobblamehistory |