repo.or.cz
/
GalaxyCodeBases.git
/
search
commit
grep
author
committer
pickaxe
?
search:
re
summary
|
log
|
graphiclog1
|
graphiclog2
|
commit
|
commitdiff
|
tree
|
refs
|
edit
|
fork
first
·
prev
·
next
renamed: oyk312.pl -> oyk416.pl
2019-04-16
Yuuk
i
Galaxy
re
n
amed:
oyk3
1
2
.
pl -> oyk416
.
pl
commit
|
commitdiff
|
tree
2019-04-16
Y
u
uki
G
a
laxy
modified: oyk312
.
pl
commit
|
commitdiff
|
tree
2019-04-16
Yuuki Galaxy
modified:
o
yk
.
pl
commit
|
commitdiff
|
tree
2019-04-16
Yuuki Galax
y
modifie
d
: oyk3
1
2
.
p
l
commit
|
commitdiff
|
tree
2019-04-08
Yuuki Gal
a
xy
Added CPE for oyk
.
pl
commit
|
commitdiff
|
tree
2019-04-08
Yuuki Galaxy
new
file: cpi
.
pl
commit
|
commitdiff
|
tree
2019-04-01
Yuuki Gal
a
xy
modified: oyk3
1
2
.
p
l
commit
|
commitdiff
|
tree
2019-04-01
Yuuki Galaxy
modi
f
ie
d
: oyk
3
12
.
pl
commit
|
commitdiff
|
tree
2019-03-22
Y
u
u
ki
G
alaxy
modifie
d
:
filte
r
.
p
l
commit
|
commitdiff
|
tree
2019-03-22
Yuuk
i
G
a
laxy
m
o
di
f
i
e
d: filter
.
pl
commit
|
commitdiff
|
tree
2019-03-22
Y
uuki Gal
a
xy
mo
d
i
f
ied:
filter
.
pl
commit
|
commitdiff
|
tree
2019-03-22
Yuuki Ga
l
axy
modified: filter
.
pl
commit
|
commitdiff
|
tree
2019-03-14
Yuuki Galaxy
modified: samdept
h
s
t
at
.
cf
.
py
commit
|
commitdiff
|
tree
2019-03-14
Yuuki Gal
a
xy
new file:
s
a
mdepthstat
.
cf
.
p
y
commit
|
commitdiff
|
tree
2019-03-12
Yu
u
ki Galaxy
modified
:
oyk
3
12
.
p
l
commit
|
commitdiff
|
tree
2019-03-12
Yuuki Galaxy
renamed:
oyk913
.
pl -> oyk312
.
p
l
commit
|
commitdiff
|
tree
2019-03-12
Yuu
k
i G
a
laxy
modifie
d
: F
G
I/Ge
t
CPI
.
pm
commit
|
commitdiff
|
tree
2019-03-12
Yuuki Galaxy
modi
f
ied:
F
G
I/G
e
tCPI
.
pm
commit
|
commitdiff
|
tree
2019-03-12
Y
u
uki Galaxy
modif
i
ed
:
p
r
imer
.
pl
commit
|
commitdiff
|
tree
2019-03-12
Y
uuki
Galaxy
n
ew file
:
perl/etc/j
u
stonce/primer
.
pl
commit
|
commitdiff
|
tree
2019-03-11
Y
uuki G
a
l
a
xy
m
odifie
d
: sa
m
d
epthsta
t
.
p
o
ol
.
py
commit
|
commitdiff
|
tree
2019-03-11
Yu
u
ki Galaxy
m
o
di
f
ied: sa
m
depthstat
.
pool
.
py
commit
|
commitdiff
|
tree
2019-03-11
Yu
u
ki Gal
a
x
y
mod
i
fie
d
:
samdepths
t
at
.
p
ool
.
p
y
commit
|
commitdiff
|
tree
2019-03-11
Yuuki Ga
l
axy
modifie
d
: samdepthstat
.
pool
.
py
commit
|
commitdiff
|
tree
2019-03-11
Yuuki Ga
l
a
xy
modified: sam
d
ept
h
stat
.
poo
l
.
py
commit
|
commitdiff
|
tree
2019-03-11
Yuuk
i
Ga
l
axy
modified: samdepthstat
.
pool
.
p
y
commit
|
commitdiff
|
tree
2019-03-11
Y
u
uki Gala
x
y
modified: python/etc/samdepthst
a
t
.
pool
.
py
commit
|
commitdiff
|
tree
2019-03-07
Yuuki Galaxy
n
e
w file:
samde
p
t
hstat
.
p
ool
.
py
commit
|
commitdiff
|
tree
2019-03-02
Yuuki Galaxy
modified: g
v
een
.
pl
commit
|
commitdiff
|
tree
2019-03-02
Yuuki Galaxy
ne
w
file: gveen
.
pl
commit
|
commitdiff
|
tree
2019-03-02
Y
u
u
ki
Galax
y
mod
i
fied:
fVarScan
.
p
l
commit
|
commitdiff
|
tree
2019-03-02
Yuuki
G
alaxy
modifie
d
:
fVarScan
.
pl
commit
|
commitdiff
|
tree
2019-03-01
Yuuki Galaxy
modified
:
fVarS
c
a
n
.
pl
commit
|
commitdiff
|
tree
2019-02-28
Yuuki Gal
a
xy
new file:
fVa
r
Scan
.
pl
commit
|
commitdiff
|
tree
2019-02-22
Yuuki Galaxy
n
ew fil
e
:
w
offdown
.
py
commit
|
commitdiff
|
tree
2019-02-15
Y
uuk
i
Galaxy
mod
i
fied:
c
n
v_somat
i
c
_
pair_w
o
rkflow
.
b38
.
inp
u
ts
.
js
o
n
commit
|
commitdiff
|
tree
2019-02-14
Y
uuki
Galaxy
set `is_r
u
n_
o
ncotator` to f
a
lse
commit
|
commitdiff
|
tree
2019-02-14
Yuuki
G
alaxy
new file:
cn
v
_somatic/cnv_somatic
_
onc
o
tator_w
o
r
k
f
low
.
wdl
commit
|
commitdiff
|
tree
2019-02-14
Y
uuki G
a
laxy
renam
e
d:
gat
k
4-somatic-cnvs/cnv_common_tasks
.
wdl
.
.
.
commit
|
commitdiff
|
tree
2019-02-14
Y
u
uki Galaxy
m
odi
f
ied: gat
k
4-somatic-cnvs
commit
|
commitdiff
|
tree
2019-02-13
Y
u
uki Gala
x
y
Add gat
k
-wor
k
flows/gatk4
-
s
o
mati
c
-cnvs
commit
|
commitdiff
|
tree
2019-02-13
Yuuki Ga
l
axy
modified:
f
ilter
.
p
l
commit
|
commitdiff
|
tree
2019-02-13
Yuuki Gala
x
y
new file: filter2
.
pl
commit
|
commitdiff
|
tree
2019-02-12
Yuuki Galax
y
mo
d
ified:
sa
m
depthstat
.
p
y
commit
|
commitdiff
|
tree
2019-02-12
Y
uuk
i
Galaxy
modifi
e
d:
samdepthstat
.
py
commit
|
commitdiff
|
tree
2019-02-12
Yuuki Gal
a
xy
modified: sam
d
epths
t
at
.
py
commit
|
commitdiff
|
tree
2019-02-12
Yuuki Galaxy
rena
m
ed:
s
amdepthplot
.
py -> samdept
h
stat
.
py
commit
|
commitdiff
|
tree
2019-02-12
Y
u
uki Galaxy
m
od
i
fied:
s
amde
p
thplot
.
py
commit
|
commitdiff
|
tree
2019-02-12
Yuuki Galaxy
mod
i
fied:
samdepthplot
.
py
commit
|
commitdiff
|
tree
2019-02-02
Yuu
k
i Galaxy
mo
d
ified:
samdepthplot
.
py
commit
|
commitdiff
|
tree
2019-02-02
Yuuki Ga
l
axy
mo
d
ified: samd
e
p
thplot
.
py
commit
|
commitdiff
|
tree
2019-02-02
Yuuki Galaxy
modi
f
i
e
d
:
sam
d
e
pthplot
.
py
commit
|
commitdiff
|
tree
2019-02-02
Yuu
k
i
Gal
a
xy
mod
i
fi
e
d: samdepthplot
.
py
commit
|
commitdiff
|
tree
2019-02-01
Yuuki
G
alaxy
m
od
i
fied: samdepthp
l
ot
.
py
commit
|
commitdiff
|
tree
2019-02-01
Yuuki Galaxy
m
o
difie
d
:
samdepthp
l
ot
.
py
commit
|
commitdiff
|
tree
2019-02-01
Yuuki Galaxy
ht
t
ps://github
.
com/bosswissam/pysize
.
git
commit
|
commitdiff
|
tree
2019-02-01
Yuuki Galaxy
new file: lib/pysize/pysize
.
py
commit
|
commitdiff
|
tree
2019-02-01
Yuuki Galaxy
new file: pyt
h
on/etc/samd
e
p
t
hplot
.
py
commit
|
commitdiff
|
tree
2019-01-31
Yuuki Galaxy
modified: sa
m
flagf
i
lter
.
py
commit
|
commitdiff
|
tree
2019-01-31
Yuuki Galaxy
added
s
ta
t
s: samflagfilter
.
p
y
commit
|
commitdiff
|
tree
2019-01-31
Yuuki
G
alaxy
mo
d
ified: s
a
mflagf
i
lte
r
.
py
commit
|
commitdiff
|
tree
2019-01-31
Yuu
k
i Galaxy
modified:
sam
f
la
g
filter
.
py
commit
|
commitdiff
|
tree
2019-01-30
Yuuki Galaxy
modified: samflagfilter
.
p
y
commit
|
commitdiff
|
tree
2019-01-30
Yuuki Galaxy
mod
i
fied
:
samfla
g
filter
.
py
commit
|
commitdiff
|
tree
2019-01-29
Yuuki Galaxy
mod
i
fied: samflagfilter
.
py
commit
|
commitdiff
|
tree
2019-01-29
Yuuki
Galaxy
Merge branch 'master' of github
.
c
o
m
:galax
y
sd/G
a
laxyCodeBase
s
commit
|
commitdiff
|
tree
2019-01-29
Yuuki G
a
l
a
x
y
n
e
w file: python/e
t
c/samflag
f
il
t
er
.
p
y
commit
|
commitdiff
|
tree
2019-01-18
Y
uuki
G
a
laxy
Merge branch
'master' of github
.
com:galax
y
s
d
/GalaxyCodeBases
commit
|
commitdiff
|
tree
2019-01-13
Yuuki
G
a
l
axy
modifi
e
d: r
.
rb
commit
|
commitdiff
|
tree
2019-01-09
Yuuk
i
Gala
x
y
mo
d
ified:
gitre
p
o
.
init
.
sh
commit
|
commitdiff
|
tree
2019-01-09
Yuuki Galaxy
modified: shared
/
bioinfo
0
1
commit
|
commitdiff
|
tree
2019-01-09
Yuuki Galaxy
modifie
d
:
.
gitm
o
dules
commit
|
commitdiff
|
tree
2019-01-07
Yuuki
G
alaxy
m
o
d
ified:
g
e
r
mline2-joint-disc
o
ver
y
-gatk4-
l
ocal
.
w
d
l
commit
|
commitdiff
|
tree
2019-01-07
Yuuki Galaxy
modifi
e
d:
ge
r
mline2-joint-discovery-g
a
tk4-local
.
.
.
commit
|
commitdiff
|
tree
2019-01-04
Yu
u
ki
G
ala
x
y
mod
i
fied: ger
m
l
ine1-hapl
o
typecaller-g
v
cf-gatk4
.
wd
l
commit
|
commitdiff
|
tree
2019-01-04
Yuuki Galaxy
de-docker
commit
|
commitdiff
|
tree
2019-01-04
Yuu
k
i
Gal
a
xy
mo
d
ified:
s
hared
/
bioi
n
fo01
commit
|
commitdiff
|
tree
2019-01-04
Yuuki
G
alaxy
new fi
l
e
: germl
i
ne1-haplo
t
ypeca
l
ler-gvcf-gatk4
.
wdl
commit
|
commitdiff
|
tree
2018-12-25
Yuuki Galaxy
modi
f
ied:
f
ilter
.
pl
commit
|
commitdiff
|
tree
2018-12-25
Yuuki Gala
x
y
modified:
f
i
lter
.
pl
commit
|
commitdiff
|
tree
2018-12-25
Yuuki
G
a
l
axy
mod
i
fied: filt
e
r
.
pl
commit
|
commitdiff
|
tree
2018-12-25
Yuuki
Ga
l
axy
modif
i
ed:
filter
.
pl
commit
|
commitdiff
|
tree
2018-12-25
Yuuk
i
Galaxy
modified: filte
r
.
pl
commit
|
commitdiff
|
tree
2018-12-25
Y
uuki Ga
l
axy
m
o
dified:
fi
l
te
r
.
pl
commit
|
commitdiff
|
tree
2018-12-21
Y
u
uki Galaxy
modif
i
e
d:
f
il
t
er
.
pl
commit
|
commitdiff
|
tree
2018-12-21
Yuuki Galaxy
m
o
dified:
filter
.
pl
commit
|
commitdiff
|
tree
2018-12-21
Y
u
uki Galaxy
modified
:
fi
l
ter
.
pl
commit
|
commitdiff
|
tree
2018-12-20
Yuuk
i
Gala
x
y
modified:
m
y
genssh
k
e
ys
.
s
h
commit
|
commitdiff
|
tree
2018-12-20
Yuuki Galaxy
n
ew
f
ile: m
y
gensshk
e
y
s
.
sh
commit
|
commitdiff
|
tree
2018-12-20
Y
u
uki Ga
l
axy
modified: filter
.
pl
commit
|
commitdiff
|
tree
2018-12-19
Y
uu
k
i
Galaxy
modified: bioinfo01
commit
|
commitdiff
|
tree
2018-12-19
Y
uuki
G
alaxy
modified: s
h
ared/bioinfo01
commit
|
commitdiff
|
tree
2018-12-19
Yuu
k
i
G
alaxy
modified:
.
gitmodu
l
es
commit
|
commitdiff
|
tree
2018-12-19
Yuuk
i
Galaxy
mo
d
if
i
ed:
mut
e
ct2
.
wdl
commit
|
commitdiff
|
tree
2018-12-17
Yuuk
i
Galaxy
new file: etc/gatk-wdl/cro
m
well
.
conf
commit
|
commitdiff
|
tree
2018-12-17
Y
uuki G
a
l
axy
modified:
gensshk
e
ys
.
s
h
commit
|
commitdiff
|
tree
2018-12-17
Yuuki
G
al
a
x
y
new f
i
le: etc/Server/ssh-
k
eygen/gensshkey
s
.
sh
commit
|
commitdiff
|
tree
2018-12-14
Yuuki Gala
x
y
mo
d
i
f
i
e
d
: mutect2
.
wd
l
commit
|
commitdiff
|
tree
2018-12-14
Y
u
uki Galaxy
modified: mu
t
ect2
.
bgi
.
inputs
.
json
commit
|
commitdiff
|
tree
2018-12-14
Yuuki
G
alaxy
modifie
d
: filt
e
r
.
pl
commit
|
commitdiff
|
tree
next