feat: add diag buffer object (#1019)
[FMS.git] / CMakeLists.txt
bloba9922bae651f9d8b266cbd00ec95abdfac89644e
1 #***********************************************************************
2 #*                   GNU Lesser General Public License
3 #*
4 #* This file is part of the GFDL Flexible Modeling System (FMS).
5 #*
6 #* FMS is free software: you can redistribute it and/or modify it under
7 #* the terms of the GNU Lesser General Public License as published by
8 #* the Free Software Foundation, either version 3 of the License, or (at
9 #* your option) any later version.
11 #* FMS is distributed in the hope that it will be useful, but WITHOUT
12 #* ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
13 #* FITNESS FOR A PARTICULAR PURPOSE.  See the GNU General Public License
14 #* for more details.
16 #* You should have received a copy of the GNU Lesser General Public
17 #* License along with FMS.  If not, see <http://www.gnu.org/licenses/>.
18 #***********************************************************************
20 # Copyright (c) GFDL, @underwoo
22 cmake_minimum_required(VERSION 3.12 FATAL_ERROR)
24 # add build type for debug, overrides default flags (set with $FCFLAGS, $CFLAGS)
25 set(CMAKE_Fortran_FLAGS_DEBUG)
27 # Define the CMake project
28 project(FMS
29   VERSION 2023.04.0
30   DESCRIPTION  "GFDL FMS Library"
31   HOMEPAGE_URL "https://www.gfdl.noaa.gov/fms"
32   LANGUAGES C Fortran)
34 include(GNUInstallDirs)
36 if(NOT CMAKE_BUILD_TYPE MATCHES "^(Debug|Release|RelWithDebInfo|MinSizeRel)$")
37   message(STATUS "Setting build type to 'Release' as none was specified.")
38   set(CMAKE_BUILD_TYPE
39       "Release"
40       CACHE STRING "Choose the type of build." FORCE)
41   set_property(CACHE CMAKE_BUILD_TYPE PROPERTY STRINGS "Debug" "Release" "MinSizeRel" "RelWithDebInfo")
42 endif()
44 if(NOT CMAKE_C_COMPILER_ID MATCHES "^(Intel|GNU|Clang|IntelLLVM)$")
45   message(
46     WARNING "Compiler not officially supported: ${CMAKE_C_COMPILER_ID}")
47 endif()
49 if(NOT CMAKE_Fortran_COMPILER_ID MATCHES "^(Intel|GNU|IntelLLVM)$")
50   message(
51     WARNING "Compiler not officially supported: ${CMAKE_Fortran_COMPILER_ID}")
52 endif()
54 # Append directory that contains CMake Modules for building FMS
55 list(APPEND CMAKE_MODULE_PATH ${CMAKE_CURRENT_SOURCE_DIR}/cmake)
57 # Build options
58 option(OPENMP "Build FMS with OpenMP support"        OFF)
59 option(32BIT  "Build 32-bit (r4) FMS library"         ON)
60 option(64BIT  "Build 64-bit (r8) FMS library"        OFF)
61 option(FPIC   "Build with position independent code" OFF)
63 # Options for compiler definitions
64 option(INTERNAL_FILE_NML     "Enable compiler definition -DINTERNAL_FILE_NML"      ON)
65 option(ENABLE_QUAD_PRECISION "Enable compiler definition -DENABLE_QUAD_PRECISION"  ON)
66 option(GFS_PHYS              "Enable compiler definition -DGFS_PHYS"              OFF)
67 option(LARGEFILE             "Enable compiler definition -Duse_LARGEFILE"         OFF)
68 option(WITH_YAML             "Enable compiler definition -Duse_yaml"              OFF)
69 option(USE_DEPRECATED_IO     "Enable compiler definition -Duse_deprecated_io (compile with fms_io/mpp_io)"   OFF)
71 if(32BIT)
72   list(APPEND kinds "r4")
73 endif()
74 if(64BIT)
75   list(APPEND kinds "r8")
76 endif()
77 if(NOT kinds)
78   message(STATUS "Single Precision 32BIT: ${32BIT}")
79   message(STATUS "Double Precision 64BIT: ${64BIT}")
80   message(FATAL_ERROR "Either 32BIT or 64BIT should be ON")
81 endif()
83 # Find dependencies
84 find_package(MPI REQUIRED COMPONENTS C Fortran)
85 find_package(NetCDF REQUIRED COMPONENTS C Fortran)
87 # Check for the OpenMP library and set the required compile flags
88 if (OPENMP)
89   find_package(OpenMP REQUIRED COMPONENTS C Fortran)
90 endif()
92 if (WITH_YAML)
93   find_package(libyaml REQUIRED)
94   include_directories(${LIBYAML_INCLUDE_DIR})
95 endif ()
97 # Enables position independent code (i.e., -fPIC)
98 if (FPIC)
99   set(CMAKE_POSITION_INDEPENDENT_CODE ON)
100 endif ()
102 # Collect FMS Fortran source files
103 list(APPEND fms_fortran_src_files
104   affinity/fms_affinity.F90
105   amip_interp/amip_interp.F90
106   astronomy/astronomy.F90
107   axis_utils/axis_utils.F90
108   axis_utils/axis_utils2.F90
109   block_control/block_control.F90
110   column_diagnostics/column_diagnostics.F90
111   constants/constants.F90
112   constants/fmsconstants.F90
113   constants4/constantsr4.F90
114   constants4/fmsconstantsr4.F90
115   coupler/atmos_ocean_fluxes.F90
116   coupler/coupler_types.F90
117   coupler/ensemble_manager.F90
118   data_override/get_grid_version.F90
119   data_override/data_override.F90
120   diag_integral/diag_integral.F90
121   diag_manager/diag_axis.F90
122   diag_manager/diag_data.F90
123   diag_manager/diag_grid.F90
124   diag_manager/diag_manager.F90
125   diag_manager/diag_output.F90
126   diag_manager/diag_table.F90
127   diag_manager/diag_util.F90
128   diag_manager/fms_diag_time_reduction.F90
129   diag_manager/fms_diag_outfield.F90
130   diag_manager/fms_diag_elem_weight_procs.F90
131   diag_manager/fms_diag_fieldbuff_update.F90
132   diag_manager/fms_diag_bbox.F90
133   diag_manager/fms_diag_time_utils.F90
134   diag_manager/fms_diag_object.F90
135   diag_manager/fms_diag_yaml.F90
136   diag_manager/fms_diag_file_object.F90
137   diag_manager/fms_diag_field_object.F90
138   diag_manager/fms_diag_axis_object.F90
139   diag_manager/fms_diag_dlinked_list.F90
140   diag_manager/fms_diag_object_container.F90
141   diag_manager/fms_diag_buffer.F90
142   drifters/cloud_interpolator.F90
143   drifters/drifters.F90
144   drifters/drifters_comm.F90
145   drifters/drifters_core.F90
146   drifters/drifters_input.F90
147   drifters/drifters_io.F90
148   drifters/quicksort.F90
149   exchange/stock_constants.F90
150   exchange/xgrid.F90
151   field_manager/field_manager.F90
152   field_manager/fm_util.F90
153   field_manager/fm_yaml.F90
154   fms/fms_io.F90
155   fms/fms.F90
156   fms2_io/blackboxio.F90
157   fms2_io/fms_io_utils.F90
158   fms2_io/fms_netcdf_domain_io.F90
159   fms2_io/fms_netcdf_unstructured_domain_io.F90
160   fms2_io/fms2_io.F90
161   fms2_io/netcdf_io.F90
162   horiz_interp/horiz_interp_bicubic.F90
163   horiz_interp/horiz_interp_bilinear.F90
164   horiz_interp/horiz_interp_conserve.F90
165   horiz_interp/horiz_interp_spherical.F90
166   horiz_interp/horiz_interp_type.F90
167   horiz_interp/horiz_interp.F90
168   interpolator/interpolator.F90
169   memutils/memutils.F90
170   monin_obukhov/monin_obukhov_inter.F90
171   monin_obukhov/monin_obukhov.F90
172   mosaic/gradient.F90
173   mosaic/grid.F90
174   mosaic/mosaic.F90
175   mosaic2/grid2.F90
176   mosaic2/mosaic2.F90
177   mpp/mpp.F90
178   mpp/mpp_data.F90
179   mpp/mpp_domains.F90
180   mpp/mpp_efp.F90
181   mpp/mpp_io.F90
182   mpp/mpp_memutils.F90
183   mpp/mpp_parameter.F90
184   mpp/mpp_utilities.F90
185   parser/yaml_parser.F90
186   parser/fms_yaml_output.F90
187   platform/platform.F90
188   random_numbers/mersennetwister.F90
189   random_numbers/random_numbers.F90
190   sat_vapor_pres/sat_vapor_pres_k.F90
191   sat_vapor_pres/sat_vapor_pres.F90
192   string_utils/fms_string_utils.F90
193   time_interp/time_interp_external.F90
194   time_interp/time_interp_external2.F90
195   time_interp/time_interp.F90
196   time_manager/get_cal_time.F90
197   time_manager/time_manager.F90
198   topography/gaussian_topog.F90
199   topography/topography.F90
200   tracer_manager/tracer_manager.F90
201   tridiagonal/tridiagonal.F90
202   libFMS.F90
205 # Collect FMS C source files
206 list(APPEND fms_c_src_files
207   affinity/affinity.c
208   fms/fms_stacksize.c
209   mosaic/create_xgrid.c
210   mosaic/gradient_c2l.c
211   mosaic/interp.c
212   mosaic/mosaic_util.c
213   mosaic/read_mosaic.c
214   mpp/mpp_memuse.c
215   parser/yaml_parser_binding.c
216   parser/yaml_output_functions.c
217   string_utils/fms_string_utils_binding.c
220 # Collect FMS header files
221 list(APPEND fms_header_files
222   include/file_version.h
223   include/fms_platform.h
226 # Standard FMS compiler definitions
227 list(APPEND fms_defs
228   use_libMPI
229   use_netCDF)
231 # check gettid
232 include(CheckFunctionExists)
233 check_function_exists(gettid HAVE_GETTID)
234 if(HAVE_GETTID)
235   list(APPEND fms_defs HAVE_GETTID)
236 endif()
238 # Additional (optional) compiler definitions
239 if(NOT CONSTANTS)
240     set(CONSTANTS GFDL)
241 endif()
242 if(CONSTANTS STREQUAL "GFS")
243   list(APPEND fms_defs GFS_CONSTANTS)
244 elseif(CONSTANTS STREQUAL "GEOS")
245   list(APPEND fms_defs GEOS_CONSTANTS)
246 elseif(CONSTANTS STREQUAL "GFDL")
247   list(APPEND fms_defs GFDL_CONSTANTS)
248 else()
249   message(FATAL_ERROR "CONSTANTS=${CONSTANTS} option not supported")
250 endif()
252 if(GFS_PHYS)
253   list(APPEND fms_defs GFS_PHYS)
254 endif()
256 if(WITH_YAML)
257   list(APPEND fms_defs use_yaml)
258 endif()
260 if(USE_DEPRECATED_IO)
261   list(APPEND fms_defs use_deprecated_io)
262 endif()
264 if(INTERNAL_FILE_NML)
265   list(APPEND fms_defs INTERNAL_FILE_NML)
266 endif()
268 if(ENABLE_QUAD_PRECISION)
269   list(APPEND fms_defs ENABLE_QUAD_PRECISION)
270 endif()
272 if(LARGEFILE)
273   list(APPEND fms_defs use_LARGEFILE)
274 endif()
276 # Precision-based compiler definitions
277 if(32BIT)
278   list(APPEND r4_defs OVERLOAD_R4 OVERLOAD_R8)
279 endif()
281 # Add platform specific compiler definitions
282 if(APPLE)
283   list(APPEND fms_defs __APPLE__)
284 endif()
286 # Obtain compiler-specific flags
287 include(fms_compiler_flags)
289 foreach(kind ${kinds})
291   set(libTgt fms_${kind})
292   set(includeDir "include_${kind}")
293   set(moduleDir "${CMAKE_CURRENT_BINARY_DIR}/${includeDir}")
295   # C
296   add_library(${libTgt}_c OBJECT ${fms_c_src_files})
298   target_include_directories(${libTgt}_c PRIVATE include)
299   target_compile_definitions(${libTgt}_c PRIVATE "${fms_defs}")
301   target_link_libraries(${libTgt}_c PRIVATE NetCDF::NetCDF_C
302                                             MPI::MPI_C)
304   if(OpenMP_C_FOUND)
305     target_link_libraries(${libTgt}_c PRIVATE OpenMP::OpenMP_C)
306   endif()
308   # Fortran
309   add_library(${libTgt}_f OBJECT ${fms_fortran_src_files})
311   target_include_directories(${libTgt}_f PRIVATE include
312                                                  fms
313                                                  fms/include
314                                                  fms2_io/include
315                                                  string_utils/include
316                                                  mpp/include
317                                                  column_diagnostics/include
318                                                  monin_obukhov/include
319                                                  sat_vapor_pres/include
320                                                  horiz_interp/include
321                                                  diag_integral/include
322                                                  random_numbers/include
323                                                  diag_manager/include
324                                                  constants4
325                                                  topography/include
326                                                  axis_utils/include
327                                                  mosaic2/include
328                                                  constants
329                                                  astronomy/include
330                                                  field_manager/include
331                                                  time_interp/include
332                                                  tracer_manager/include
333                                                  tridiagonal/include
334                                                  interpolator/include
335                                                  coupler/include
336                                                  data_override/include
337                                                  amip_interp/include)
339   target_compile_definitions(${libTgt}_f PRIVATE "${fms_defs}")
340   target_compile_definitions(${libTgt}_f PRIVATE "${${kind}_defs}")
342   string(TOLOWER ${CMAKE_BUILD_TYPE} build_type)
343   if (NOT build_type STREQUAL debug)
344     set_target_properties(${libTgt}_f PROPERTIES COMPILE_FLAGS
345                                                "${${kind}_flags}")
346   endif()
347   set_target_properties(${libTgt}_f PROPERTIES Fortran_MODULE_DIRECTORY
348                                                ${moduleDir})
350   target_link_libraries(${libTgt}_f PRIVATE NetCDF::NetCDF_Fortran
351                                             MPI::MPI_Fortran)
353   if(OpenMP_Fortran_FOUND)
354     target_link_libraries(${libTgt}_f PRIVATE OpenMP::OpenMP_Fortran)
355   endif()
357   # Check if gnu 10 or higher
358   # this should only be needed with mpich, but wasn't able to find a good way to find the MPI flavor consistently
359   if ( CMAKE_Fortran_COMPILER_VERSION MATCHES "1[0-9]\.[0-9]*\.[0-9]*" AND CMAKE_Fortran_COMPILER_ID MATCHES "GNU")
360     include(CheckFortranCompilerFlag)
361     check_fortran_compiler_flag("-fallow-argument-mismatch" _arg_mismatch_flag)
362     if(_arg_mismatch_flag)
363       message(STATUS "Adding -fallow-argument-mismatch flag to compile with GCC >=10 and MPICH")
364       target_compile_options(${libTgt}_f PRIVATE "-fallow-argument-mismatch;-w")
365     endif()
366   endif()
368   # FMS (C + Fortran)
369   add_library(${libTgt} STATIC $<TARGET_OBJECTS:${libTgt}_c>
370                                $<TARGET_OBJECTS:${libTgt}_f>)
372   target_include_directories(${libTgt} PUBLIC
373     $<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/include>
374     $<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/fms>
375     $<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/fms/include>
376     $<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/fms2_io/include>
377     $<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/column_diagnostics/include>
378     $<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/astronomy/include>
379     $<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/monin_obukhov/include>
380     $<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/sat_vapor_pres/include>
381     $<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/field_manager/include>
382     $<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/horiz_interp/include>
383     $<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/mosaic2/include>
384     $<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/string_utils/include>
385     $<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/mpp/include>
386     $<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/diag_manager/include>
387     $<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/topography/include>
388     $<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/random_numbers/include>
389     $<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/diag_integral/include>
390     $<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/diag_manager/include>
391     $<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/tracer_manager/include>
392     $<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/interpolator/include>
393     $<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/coupler/include>
394     $<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/mosaic2/include>
395     $<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/data_override/include>
396     $<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/tridiagonal/include>
397     $<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/amip_interp/include>)
399   target_include_directories(${libTgt} INTERFACE
400     $<BUILD_INTERFACE:${moduleDir}>
401     $<INSTALL_INTERFACE:${includeDir}>)
403   target_compile_definitions(${libTgt} PRIVATE "${fms_defs}")
404   target_compile_definitions(${libTgt} PRIVATE "${${kind}_defs}")
406   target_link_libraries(${libTgt} PUBLIC NetCDF::NetCDF_Fortran
407                                          MPI::MPI_Fortran)
409   if(OpenMP_Fortran_FOUND)
410     target_link_libraries(${libTgt} PRIVATE OpenMP::OpenMP_C OpenMP::OpenMP_Fortran)
411   endif()
413   add_library(FMS::${libTgt} ALIAS ${libTgt})
415   list(APPEND LIB_TARGETS ${libTgt})
416   install(DIRECTORY ${moduleDir}    DESTINATION ${CMAKE_INSTALL_PREFIX})
417   install(FILES ${fms_header_files} DESTINATION ${CMAKE_INSTALL_PREFIX}/${includeDir})
419 endforeach()
421 install(
422   TARGETS ${LIB_TARGETS}
423   EXPORT FMSExports
424   RUNTIME DESTINATION bin
425   LIBRARY DESTINATION lib
426   ARCHIVE DESTINATION lib)
428 ### Package config
429 include(CMakePackageConfigHelpers)
430 set(CONFIG_INSTALL_DESTINATION lib/cmake/fms)
432 export(EXPORT FMSExports
433   NAMESPACE FMS::
434   FILE fms-targets.cmake)
436 configure_package_config_file(
437   ${CMAKE_CURRENT_SOURCE_DIR}/cmake/FMSConfig.cmake.in ${CMAKE_CURRENT_BINARY_DIR}/fms-config.cmake
438   INSTALL_DESTINATION ${CONFIG_INSTALL_DESTINATION})
439 install(FILES ${CMAKE_CURRENT_BINARY_DIR}/fms-config.cmake
440   DESTINATION ${CONFIG_INSTALL_DESTINATION})
442 write_basic_package_version_file(
443   ${CMAKE_CURRENT_BINARY_DIR}/fms-config-version.cmake
444   VERSION ${PROJECT_VERSION}
445   COMPATIBILITY AnyNewerVersion)
446 install(FILES ${CMAKE_CURRENT_BINARY_DIR}/fms-config-version.cmake
447   DESTINATION ${CONFIG_INSTALL_DESTINATION})
449 install(EXPORT FMSExports
450   NAMESPACE FMS::
451   FILE fms-targets.cmake
452   DESTINATION ${CONFIG_INSTALL_DESTINATION})