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Change --gs-mo default to 67%.
2007-04-19
D
a
v
id Hilv
e
rt
Cha
n
ge --gs-mo def
a
ult to 6
7
%
.
commit
|
commitdiff
|
tree
2007-04-19
David Hi
l
vert
ui: Log output
e
nhan
c
eme
n
t
s
.
commit
|
commitdiff
|
tree
2007-04-19
Davi
d
Hilvert
Allo
w
--
g
s-mo to
b
e s
p
e
c
ifi
e
d as a pe
r
centage, make
.
.
.
commit
|
commitdiff
|
tree
2007-04-19
D
avid Hilv
e
rt
d2
:
:align: Modify _align() a
n
d make_
e
lement
_
nontrivial
.
.
.
commit
|
commitdiff
|
tree
2007-04-19
D
a
v
i
d Hilvert
d
2::align: Add method
g
et_perturb_s
e
t()
.
commit
|
commitdiff
|
tree
2007-04-17
David Hilve
r
t
A
d
d
file 'VE
R
S
I
ON' for cases where
t
his does
not ex
i
s
t
.
commit
|
commitdiff
|
tree
2007-04-17
David Hilvert
d2::trans_mul
t
i::
s
p
ecifi
c
_
r
escale
(
): Repla
c
e as
s
e
rtion
.
.
.
commit
|
commitdiff
|
tree
2007-04-17
David Hilve
r
t
Changelog edi
t
s
.
commit
|
commitdiff
|
tree
2007-04-17
David Hilvert
Upda
t
e changelog
commit
|
commitdiff
|
tree
2007-04-17
D
avi
d
Hilvert
Add fi
l
e
u
i_quiet
.
h
.
commit
|
commitdiff
|
tree
2007-04-17
David Hilvert
c
o
n
figure
.
in: Use content
s
of f
i
le VERSION for version
.
.
.
commit
|
commitdiff
|
tree
2007-04-16
David Hilvert
M
od
i
fy black
level
implementation to alw
a
ys
a
pp
l
y
t
o
.
.
.
commit
|
commitdiff
|
tree
2007-04-16
Dav
i
d
H
il
v
e
r
t
Add
'quiet'
u
s
er
in
t
erfa
c
e type
.
commit
|
commitdiff
|
tree
2007-04-16
David Hilvert
M
ove output id
e
ntif
i
cation details to user inter
f
ace
.
commit
|
commitdiff
|
tree
2007-04-16
David Hi
l
vert
u
i
_log
:
:ip_step_done
(
): 'Fi
n
i
s
hed
f
rame' --
>
'Fini
s
he
d
.
.
.
commit
|
commitdiff
|
tree
2007-04-16
Davi
d
Hilvert
R
e
fine ui_lo
g
::ip_step_done()
.
commit
|
commitdiff
|
tree
2007-04-15
David Hi
l
vert
d
2
/ppm
.
h: Don't set gain values if none are specified
.
.
.
commit
|
commitdiff
|
tree
2007-04-15
David Hilvert
ui_lo
g
: Add sep
a
rate o
u
tput for mat
c
h and mismatch
.
.
.
commit
|
commitdiff
|
tree
2007-04-15
D
a
v
id Hilver
t
ui_lo
g
:
A
dd mo
r
e logging
o
utpu
t
.
commit
|
commitdiff
|
tree
2007-04-15
D
a
v
i
d Hilve
r
t
Add rud
i
mentary logg
i
ng interf
a
ce
.
commit
|
commitdiff
|
tree
2007-04-15
Da
v
id Hil
v
ert
u
i
:
In
d
icate w
h
en
no loca
l
al
i
gnment d
e
tails are
available
.
commit
|
commitdiff
|
tree
2007-04-14
D
a
v
id Hilvert
d2
:
:trans_mu
l
ti::spe
c
ific_rescale(): Ad
d
an assert
.
.
.
commit
|
commitdiff
|
tree
2007-04-13
David Hilv
e
rt
Begin
impleme
n
ting
d2::align::c
a
lculate_element_r
e
g
i
on()
.
commit
|
commitdiff
|
tree
2007-04-13
David Hil
v
ert
d
2
::align::_ali
g
n()
:
Add code to store
t
o and retriev
e
.
.
.
commit
|
commitdiff
|
tree
2007-04-09
David Hilver
t
Add
c
o
de to recalcu
l
a
t
e
each non-trivial non-pri
m
a
r
y
.
.
.
commit
|
commitdiff
|
tree
2007-04-09
David Hilvert
Add loca
l
_ax
_
count
t
o the li
s
t of parame
t
er
s
t
a
ken
.
.
.
commit
|
commitdiff
|
tree
2007-04-09
Dav
i
d Hilve
r
t
C
h
ange barrel distortion multiplier
a
nd ra
t
e of change
.
.
.
commit
|
commitdiff
|
tree
2007-04-08
Davi
d
H
ilvert
Ad
d
methods d2::align
:
:m
a
k
e
_el
e
me
n
t_nontrivial(
)
, d2
.
.
.
commit
|
commitdiff
|
tree
2007-04-03
D
avid
H
ilvert
d2:
:
alig
n
::follow(): Revert looping ove
r
old_* eleme
n
t
.
.
.
commit
|
commitdiff
|
tree
2007-04-03
D
a
vid Hilvert
d2::align::
f
o
llow
(
):
Up
d
ate elem
e
nt in
d
ices
of all
.
.
.
commit
|
commitdiff
|
tree
2007-04-03
D
avid Hilvert
d2::tf
i
le: Bugfix in handl
i
ng of non-primary
e
l
e
m
e
nts
.
commit
|
commitdiff
|
tree
2007-04-03
David Hilvert
C
o
p
yright notice upda
t
es
.
commit
|
commitdiff
|
tree
2007-04-03
Da
v
i
d
Hilv
e
rt
A
d
d code for
loading and saving
non-prima
r
y alignment
.
.
.
commit
|
commitdiff
|
tree
2007-04-03
Da
v
i
d
Hilvert
Update
c
h
angelog
.
commit
|
commitdiff
|
tree
2007-04-03
David H
i
l
v
ert
ui: Modify m
a
tch for
m
at
s
trings to provide constant
.
.
.
commit
|
commitdiff
|
tree
2007-04-03
D
a
vid Hilvert
ui_
t
ty: Add field width
and pre
c
i
s
i
on spec
i
fiers to
.
.
.
commit
|
commitdiff
|
tree
2007-04-03
Davi
d
Hilvert
S
w
a
p arguments to ali
g
nment
s
ta
t
u
s
so that f
r
equent
.
.
.
commit
|
commitdiff
|
tree
2007-04-03
David Hilvert
ui
_
tty:
C
hange f
l
oating poi
n
t
f
orma
t
s from %f to %g
.
.
.
commit
|
commitdiff
|
tree
2007-04-03
D
a
vid Hilvert
d
2::align: M
o
ve following logic from _align() to a
.
.
.
commit
|
commitdiff
|
tree
2007-04-02
D
a
vid Hilvert
Upd
a
te changelog
commit
|
commitdiff
|
tree
2007-04-02
David Hilver
t
Rem
o
ve f
i
le 'sga
u
ss
.
h' missing f
r
om sgauss patch,
as
.
.
.
commit
|
commitdiff
|
tree
2007-04-02
Davi
d
Hilve
r
t
Add missin
g
file f
r
om earlie
r
sgauss patch
.
Will b
e
.
.
.
commit
|
commitdiff
|
tree
2007-04-02
David Hilvert
Update c
h
ange
l
og
commit
|
commitdiff
|
tree
2007-04-02
David Hilvert
U
pdate changelog
commit
|
commitdiff
|
tree
2007-04-02
David Hilvert
M
ove
t
he multi-transf
o
rmatio
n
element swit
c
h
i
ng loop
.
.
.
commit
|
commitdiff
|
tree
2007-04-02
David Hilvert
Update Chan
g
e
log
commit
|
commitdiff
|
tree
2007-04-02
David
H
ilvert
d
2
/align
.
h
:
Recalculate diff
s
tatistics
aft
e
r increasing
.
.
.
commit
|
commitdiff
|
tree
2007-04-01
D
a
vid
H
ilvert
Modify handling
o
f
-
-i
d
entity in d2::a
l
ig
n
so that
.
.
.
commit
|
commitdiff
|
tree
2007-04-01
Dav
i
d Hilvert
Add methods for enabling and disablin
g
restricted
support
.
.
.
commit
|
commitdiff
|
tree
2007-04-01
D
avid Hilver
t
Add check for t
r
a
nsformat
i
on
support to d2::a
l
ign:
.
.
.
commit
|
commitdiff
|
tree
2007-04-01
David Hilvert
d
2::
t
rans_mu
l
ti: Add method s
u
p
ported() to check for
.
.
.
commit
|
commitdiff
|
tree
2007-03-29
D
a
v
id Hilvert
B
e
gi
n
using
n
on-trivial
mu
l
ti-transf
o
rmation
s
in
d
2
.
.
.
commit
|
commitdiff
|
tree
2007-03-29
David Hil
v
e
r
t
d2::
t
rans_m
u
lti: Add
g
et
_
e
l
ement()
method
.
commit
|
commitdiff
|
tree
2007-03-27
D
a
vid
H
ilvert
d2::render::ip
c
: Mo
d
ify allo
c
ation for
s
ubdomain a
r
guments
.
.
.
commit
|
commitdiff
|
tree
2007-03-24
David Hilve
r
t
d2::alig
n
: Al
l
ocat
e
kept_t w
i
t
h
n
ew[] rather t
h
an malloc
.
.
.
commit
|
commitdiff
|
tree
2007-03-23
D
a
v
i
d Hi
l
ve
r
t
M
odify specific_*() calls in
d2::trans_multi to c
a
ll
.
.
.
commit
|
commitdiff
|
tree
2007-03-23
David Hilvert
Allo
c
a
t
e d2::incr
e
ment
a
l
::subdomain_ar
g
s
with
n
e
w
[
.
.
.
commit
|
commitdiff
|
tree
2007-03-23
David Hilvert
R
e
s
o
l
v
e cer
t
ain co
m
p
i
l
a
tio
n
and run-time failures
.
commit
|
commitdiff
|
tree
2007-03-23
David Hilvert
d2::
t
rans_
m
u
lti:
Upda
t
e me
t
hods
f
or a trivial multi
.
.
.
commit
|
commitdiff
|
tree
2007-03-23
David Hilvert
In
i
tial version of d2/trans_multi
.
h,
t
aken from
t
he
.
.
.
commit
|
commitdiff
|
tree
2007-03-23
David
H
ilvert
Add fi
l
e d2/tran
s
_
single
.
h
for impleme
n
ting si
n
gle
.
.
.
commit
|
commitdiff
|
tree
2007-03-21
David Hil
v
ert
M
ove s
i
ngle-transformation class specifics from d2
.
.
.
commit
|
commitdiff
|
tree
2007-03-17
David Hilv
e
rt
d2/trans_
a
bs
t
ract
.
h
:
Init
i
al implementa
t
ion o
f
an abstra
c
t
.
.
.
commit
|
commitdiff
|
tree
2007-03-17
D
avid Hilvert
d2
/
tfile
.
h
: Call ung
e
tc()
when test for n
o
n-primary
.
.
.
commit
|
commitdiff
|
tree
2007-03-15
David
H
ilver
t
Revi
s
e ha
n
dl
i
ng
o
f MA elements
.
commit
|
commitdiff
|
tree
2007-03-15
D
avid
H
i
l
vert
Modif
y
--ma-card to r
a
n
ge [1,inf) a
n
d
a
d
d co
d
e to it
e
rate
.
.
.
commit
|
commitdiff
|
tree
2007-03-14
D
a
vid
Hi
l
v
ert
Add flags t
o
d2:
:
align::element_t and
d
2:;tfile to
.
.
.
commit
|
commitdiff
|
tree
2007-03-14
David Hi
l
v
e
rt
ui/ui_tty
.
h
:
Revise update() and u
p
date_l
o
o
p
(
)
so tha
t
.
.
.
commit
|
commitdiff
|
tree
2007-03-13
D
avid Hilvert
ui/ui_tty
.
h: Add a UI updat
e
thread
.
commit
|
commitdiff
|
tree
2007-03-13
David
H
ilvert
d2::alig
n
: ex
p
and a
n
d
r
ename
t
he dat
a
struc
t
ure for
.
.
.
commit
|
commitdiff
|
tree
2007-03-13
David Hilver
t
d2::align:
M
ak
e
a structure fo
r
follow sem
a
nt
i
cs
varia
b
l
e
s
.
.
.
commit
|
commitdiff
|
tree
2007-03-12
David Hilvert
Add opt
i
on ha
n
dling for --ma-card and --
m
a
-
cont multi
.
.
.
commit
|
commitdiff
|
tree
2007-03-10
David H
i
lvert
Upd
a
te changel
o
g
commit
|
commitdiff
|
tree
2007-03-10
Dav
i
d Hi
l
vert
Update
help tex
t
t
o refl
e
ct new file-scope
d
o
p
tions
.
commit
|
commitdiff
|
tree
2007-03-10
D
avid Hilvert
Allow file-scoped
--gs
a
nd --g
s
-mo
commit
|
commitdiff
|
tree
2007-03-09
David Hilvert
Update cha
n
gelog
commit
|
commitdiff
|
tree
2007-03-09
David Hilvert
Igno
r
e fex regions whe
n
n
ex is specifi
e
d
.
commit
|
commitdiff
|
tree
2007-03-09
D
a
vid
H
ilvert
U
p
d
a
t
e
c
hangelog
commit
|
commitdiff
|
tree
2007-03-09
Da
v
id Hilvert
Ad
d
--black op
t
ion
for setting black lev
e
l
.
commit
|
commitdiff
|
tree
2007-03-08
David
Hilvert
Ad
d
option --
e
v f
o
r se
t
ting e
x
posure val
u
e meta-data
.
commit
|
commitdiff
|
tree
2007-03-08
Da
v
id H
i
lvert
Disa
b
l
e implic
a
tion for --exp-regist
e
r
w
hen --cx is
.
.
.
commit
|
commitdiff
|
tree
2007-03-07
Davi
d
Hil
v
ert
Modify
profil
e
local alignment d
e
t
a
il o
u
tput to omit
.
.
.
commit
|
commitdiff
|
tree
2007-03-07
David Hilvert
Up
d
ate changelog
commit
|
commitdiff
|
tree
2007-03-07
David Hil
v
e
rt
U
pdate p
r
ofiling t
i
mer
s
to include
t
im
i
ng details for
.
.
.
commit
|
commitdiff
|
tree
2007-03-07
Da
v
i
d H
i
lvert
d2
/
ppm
.
h: Up
d
at
e
erro
r
message
f
o
r
non-PP
M
fi
l
es to
.
.
.
commit
|
commitdiff
|
tree
2007-03-04
D
a
vid Hilvert
Up
d
at
e
NEWS an
d
ver
s
ion n
u
m
ber
s
for 0
.
8
.
7 rele
a
se
.
commit
|
commitdiff
|
tree
2007-03-03
David Hilvert
U
pdat
e
c
h
an
g
elog
.
commit
|
commitdiff
|
tree
2007-03-03
David
Hilvert
Make
-
-ip-nowl de
f
ault
.
commit
|
commitdiff
|
tree
2007-02-25
Davi
d
Hilvert
Update changelog
.
commit
|
commitdiff
|
tree
2007-02-25
David Hilvert
R
evise argu
m
e
n
t handlin
g
for ip-wl argu
m
e
n
ts
.
commit
|
commitdiff
|
tree
2007-02-25
David Hil
v
ert
Imp
l
ement Irani-
P
eleg weigh
t
limits, and
s
et a default
.
.
.
commit
|
commitdiff
|
tree
2007-02-25
Davi
d
Hilvert
Update Changel
o
g
commit
|
commitdiff
|
tree
2007-02-25
David H
i
lvert
Add an
incremental renderer mean
i
nvariant weight-limited
.
.
.
commit
|
commitdiff
|
tree
2007-02-24
David
Hilv
e
rt
d2
:
:fil
t
er::s
c
aled_fil
t
er::filter_channe
l
(): Slig
h
tly
.
.
.
commit
|
commitdiff
|
tree
2007-02-24
David
H
ilv
e
rt
Update
changelo
g
commit
|
commitdiff
|
tree
2007-02-24
Dav
i
d Hilvert
d
2
:
:image::defined_
s
cale_by_half(): Replace incorrect
.
.
.
commit
|
commitdiff
|
tree
2007-02-24
David Hilver
t
d2:
:
image
:
:defined_scale_b
y
_
h
alf():
Use geomet
r
ic
m
ean
.
.
.
commit
|
commitdiff
|
tree
2007-02-17
David H
i
lvert
d2/filter/
s
ca
l
ed_filter
.
h: Clean up recently added
.
.
.
commit
|
commitdiff
|
tree
2007-02-17
David Hilvert
d
2
/
filter/scaled
_
fi
l
ter
.
h: Revise certainty
c
alcu
l
a
t
ions
.
.
.
commit
|
commitdiff
|
tree
2007-02-17
David Hilvert
N
E
WS: a
d
d 0
.
8
.
6 r
e
l
e
a
s
e inform
a
tion
commit
|
commitdiff
|
tree
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