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Update changelog
2007-04-17
D
a
v
i
d Hilvert
Upda
t
e ch
a
ngelog
commit
|
commitdiff
|
tree
2007-04-17
David H
i
lv
e
rt
Add f
i
le ui_quiet
.
h
.
commit
|
commitdiff
|
tree
2007-04-17
Da
v
id Hi
l
vert
configur
e
.
in: Use contents
of file VERSION
for ve
r
sion
.
.
.
commit
|
commitdiff
|
tree
2007-04-16
David Hilv
e
rt
M
o
dify black level i
m
plementati
o
n to
a
lways apply to
.
.
.
commit
|
commitdiff
|
tree
2007-04-16
Davi
d
Hilver
t
A
dd 'q
u
iet'
u
s
e
r
i
nterface
type
.
commit
|
commitdiff
|
tree
2007-04-16
D
a
v
i
d Hilvert
Move
o
u
t
p
u
t id
e
ntification de
t
ails to user int
e
r
face
.
commit
|
commitdiff
|
tree
2007-04-16
David H
i
lvert
ui_
l
o
g
:
:ip
_
step_done(): 'Fin
i
s
hed
f
r
a
m
e
' --> 'Fin
i
shed
.
.
.
commit
|
commitdiff
|
tree
2007-04-16
D
a
v
id Hilvert
Refine ui_log::ip_step_done()
.
commit
|
commitdiff
|
tree
2007-04-15
David Hilvert
d
2
/ppm
.
h: Don't
s
et gain
v
alues
if non
e
are
specifie
d
.
.
.
commit
|
commitdiff
|
tree
2007-04-15
David Hilvert
u
i_log: Ad
d
separa
t
e out
p
ut fo
r
m
at
c
h and mismatch
.
.
.
commit
|
commitdiff
|
tree
2007-04-15
D
avid H
i
l
v
ert
ui_log: Add
m
ore l
o
gging o
u
tput
.
commit
|
commitdiff
|
tree
2007-04-15
David Hilvert
Add rudi
m
enta
r
y l
o
ggi
n
g in
t
erface
.
commit
|
commitdiff
|
tree
2007-04-15
D
a
v
id
Hi
l
vert
u
i: Indicate when no local alignment
d
eta
i
ls are avail
a
bl
e
.
commit
|
commitdiff
|
tree
2007-04-14
Da
v
i
d
Hilvert
d2::tr
a
n
s_m
u
lti:
:
s
p
ecific_r
e
s
c
ale(): Add an assert
.
.
.
commit
|
commitdiff
|
tree
2007-04-13
David Hi
l
vert
Be
g
i
n
implementing d2::align::calculate_element_region()
.
commit
|
commitdiff
|
tree
2007-04-13
Da
v
id
H
ilve
r
t
d2::al
i
g
n::
_
a
lign()
:
A
d
d code to store to and r
e
trieve
.
.
.
commit
|
commitdiff
|
tree
2007-04-09
David Hi
l
v
e
r
t
Add code
t
o recalc
u
l
a
t
e
each non-t
r
ivial non
-
prima
r
y
.
.
.
commit
|
commitdiff
|
tree
2007-04-09
Dav
i
d
H
i
lvert
A
d
d loc
a
l
_
ax_count
to the l
i
st of paramet
e
rs
t
aken
.
.
.
commit
|
commitdiff
|
tree
2007-04-09
David Hil
v
ert
Chan
g
e barrel distortion mul
t
iplier and rate o
f
c
h
a
nge
.
.
.
commit
|
commitdiff
|
tree
2007-04-08
David Hilvert
Add method
s
d2::al
i
gn::make_elem
e
nt_no
n
tr
i
via
l
(),
d
2
.
.
.
commit
|
commitdiff
|
tree
2007-04-03
David
Hilvert
d
2::ali
g
n::
f
oll
o
w
(
): Revert looping over
old_
*
eleme
n
t
.
.
.
commit
|
commitdiff
|
tree
2007-04-03
Dav
i
d
H
i
lvert
d2::al
i
gn:
:
f
ollow(): Update e
l
ement
indices of all
.
.
.
commit
|
commitdiff
|
tree
2007-04-03
David Hilve
r
t
d2::tf
i
le: Bugfix i
n
handling of non-primary elements
.
commit
|
commitdiff
|
tree
2007-04-03
David Hilvert
Copyright no
t
ice updates
.
commit
|
commitdiff
|
tree
2007-04-03
David Hilvert
Add cod
e
for loading an
d
sav
i
ng
no
n
-primary alignment
.
.
.
commit
|
commitdiff
|
tree
2007-04-03
David Hilvert
Up
d
ate changel
o
g
.
commit
|
commitdiff
|
tree
2007-04-03
D
a
v
i
d Hilve
r
t
ui: Modi
f
y match format strings to provide constant
.
.
.
commit
|
commitdiff
|
tree
2007-04-03
David Hil
v
e
r
t
ui_tty
:
Add
f
ield
width and
precision specif
i
ers
t
o
.
.
.
commit
|
commitdiff
|
tree
2007-04-03
D
avid H
i
lvert
Swap arguments
t
o
a
lignment statu
s
s
o
that fr
e
quent
.
.
.
commit
|
commitdiff
|
tree
2007-04-03
David Hilvert
ui_tty: Change floating point formats fr
o
m
%
f t
o
%g
.
.
.
commit
|
commitdiff
|
tree
2007-04-03
David Hi
l
vert
d2::align: Move following
logic from
_al
i
g
n
() to a
.
.
.
commit
|
commitdiff
|
tree
2007-04-02
David Hilver
t
Upda
t
e changelog
commit
|
commitdiff
|
tree
2007-04-02
Davi
d
Hil
v
ert
R
emove file
'
s
gauss
.
h
'
missing
from s
g
a
u
ss patch, as
.
.
.
commit
|
commitdiff
|
tree
2007-04-02
D
avid Hilvert
Add missing file from earlier
sg
a
uss p
a
t
ch
.
Will be
.
.
.
commit
|
commitdiff
|
tree
2007-04-02
David
H
ilvert
Update
c
ha
n
gelog
commit
|
commitdiff
|
tree
2007-04-02
David Hilvert
Up
d
ate ch
a
n
g
elog
commit
|
commitdiff
|
tree
2007-04-02
D
a
vid Hilvert
Move the
m
ulti-trans
f
ormation ele
m
e
n
t swi
t
ching loop
.
.
.
commit
|
commitdiff
|
tree
2007-04-02
David Hilvert
Upda
t
e Change
l
og
commit
|
commitdiff
|
tree
2007-04-02
David Hilvert
d2/align
.
h:
R
ecalculate
d
i
f
f st
a
tistics after inc
r
e
a
si
n
g
.
.
.
commit
|
commitdiff
|
tree
2007-04-01
David Hilvert
M
o
di
f
y handling of --id
e
nti
t
y in d2
:
:al
i
g
n
so that
.
.
.
commit
|
commitdiff
|
tree
2007-04-01
D
a
vid
Hilvert
A
dd methods for
e
n
a
bli
n
g
a
nd disabling
r
estr
i
ct
e
d
s
up
p
or
t
.
.
.
commit
|
commitdiff
|
tree
2007-04-01
Da
v
i
d
H
i
lvert
Ad
d
check for transformation support to
d2::align:
.
.
.
commit
|
commitdiff
|
tree
2007-04-01
David Hi
l
vert
d2::tra
n
s_
m
ulti:
Add
method su
p
ported
(
)
t
o check for
.
.
.
commit
|
commitdiff
|
tree
2007-03-29
Da
v
id Hilvert
B
eg
i
n usi
n
g no
n
-
tri
v
ial multi-
t
ransf
o
rma
t
ion
s
in d2
.
.
.
commit
|
commitdiff
|
tree
2007-03-29
David Hilvert
d
2::
t
rans_m
u
lti: Add g
e
t_element() me
t
h
od
.
commit
|
commitdiff
|
tree
2007-03-27
David
H
ilvert
d2::re
n
d
e
r::ipc: Modify alloca
t
ion for subdomain arguments
.
.
.
commit
|
commitdiff
|
tree
2007-03-24
David Hilvert
d2::al
i
gn: Allocate kept_t
w
ith new[] rather than m
a
l
l
oc
.
.
.
commit
|
commitdiff
|
tree
2007-03-23
David Hilvert
Modi
f
y specific_*() calls in d
2
::trans
_
multi t
o
call
.
.
.
commit
|
commitdiff
|
tree
2007-03-23
David Hilvert
Allocat
e
d2::increm
e
n
tal::subdomai
n
_
args with new[
.
.
.
commit
|
commitdiff
|
tree
2007-03-23
David Hilvert
Resolve
c
ertain compilation a
n
d run
-
ti
m
e failures
.
commit
|
commitdiff
|
tree
2007-03-23
David
Hilvert
d2::trans_multi:
U
pda
t
e methods f
o
r a
t
ri
v
ial multi
.
.
.
commit
|
commitdiff
|
tree
2007-03-23
Da
v
i
d Hilv
e
rt
Initial v
e
rsion of d
2
/trans_mult
i
.
h,
take
n
from the
.
.
.
commit
|
commitdiff
|
tree
2007-03-23
Da
v
id Hilvert
Add file d2/t
r
ans_sin
g
le
.
h for im
p
lementing
single
.
.
.
commit
|
commitdiff
|
tree
2007-03-21
Davi
d
H
i
lv
e
rt
Move single
-
tra
n
sf
o
rmati
o
n c
l
ass s
p
ecifics fr
o
m d2
.
.
.
commit
|
commitdiff
|
tree
2007-03-17
Da
v
i
d
Hil
v
ert
d2/
t
rans
_
abstract
.
h:
I
nitial impl
e
mentation
of
a
n abstrac
t
.
.
.
commit
|
commitdiff
|
tree
2007-03-17
Da
v
id Hilver
t
d2/tfile
.
h: Call unget
c
() w
h
en t
e
st for non-prim
a
ry
.
.
.
commit
|
commitdiff
|
tree
2007-03-15
David Hilvert
Revise
h
andl
i
ng of MA elements
.
commit
|
commitdiff
|
tree
2007-03-15
David
H
ilvert
Modify --ma-card to ra
n
ge [1,inf)
a
n
d
a
d
d cod
e
to iterate
.
.
.
commit
|
commitdiff
|
tree
2007-03-14
David Hilvert
Ad
d
f
lags to
d2::ali
g
n::element_t and d2:;tf
i
le to
.
.
.
commit
|
commitdiff
|
tree
2007-03-14
David Hilvert
ui/ui_t
t
y
.
h: Revis
e
updat
e
() and u
p
date_loop() so that
.
.
.
commit
|
commitdiff
|
tree
2007-03-13
David Hilvert
ui/ui_tt
y
.
h: Add a UI
u
p
date thread
.
commit
|
commitdiff
|
tree
2007-03-13
David Hilvert
d2::alig
n
: expand and rename
t
h
e data structure for
.
.
.
commit
|
commitdiff
|
tree
2007-03-13
David Hilvert
d2::a
l
ign
:
Make a str
u
cture for fo
l
low semantics
v
a
riables
.
.
.
commit
|
commitdiff
|
tree
2007-03-12
David H
i
lv
e
rt
Add option handling for --ma-card and --ma-c
o
n
t
m
u
lti
.
.
.
commit
|
commitdiff
|
tree
2007-03-10
David Hilvert
Update c
h
ang
e
log
commit
|
commitdiff
|
tree
2007-03-10
D
a
vid Hilvert
Update help text
to reflect n
e
w file-scoped optio
n
s
.
commit
|
commitdiff
|
tree
2007-03-10
David
H
ilvert
Allo
w
file-scop
e
d --gs
and --gs-mo
commit
|
commitdiff
|
tree
2007-03-09
David Hil
v
ert
Update
ch
a
ngel
o
g
commit
|
commitdiff
|
tree
2007-03-09
D
avid
H
i
l
ve
r
t
Ignore fe
x
re
g
ions when nex is
spe
c
ified
.
commit
|
commitdiff
|
tree
2007-03-09
David
H
i
lve
r
t
Update changelog
commit
|
commitdiff
|
tree
2007-03-09
Da
v
id
Hilvert
Add --black
o
p
t
i
on for s
e
t
ting bla
c
k
l
e
vel
.
commit
|
commitdiff
|
tree
2007-03-08
D
a
v
i
d Hilvert
Add option
--ev
f
or sett
i
ng exposure value meta-
d
ata
.
commit
|
commitdiff
|
tree
2007-03-08
David Hilvert
D
isable implic
a
tion for --exp
-
regist
e
r w
h
en --cx is
.
.
.
commit
|
commitdiff
|
tree
2007-03-07
David Hilvert
Modify profile local alignment det
a
il outpu
t
to
omit
.
.
.
commit
|
commitdiff
|
tree
2007-03-07
Davi
d
Hilver
t
Upd
a
te changelog
commit
|
commitdiff
|
tree
2007-03-07
David Hilvert
Update profiling timers t
o
i
n
clude timing
details
for
.
.
.
commit
|
commitdiff
|
tree
2007-03-07
D
avi
d
Hilvert
d2/ppm
.
h
: Update
error message for non-PPM file
s
t
o
.
.
.
commit
|
commitdiff
|
tree
2007-03-04
David Hilver
t
Upd
a
te NEWS and version n
u
mbers for 0
.
8
.
7 release
.
commit
|
commitdiff
|
tree
2007-03-03
Dav
i
d
H
i
lvert
Updat
e
ch
a
nge
l
og
.
commit
|
commitdiff
|
tree
2007-03-03
David Hilvert
Make --ip-nowl d
e
fault
.
commit
|
commitdiff
|
tree
2007-02-25
David Hilvert
Update changel
o
g
.
commit
|
commitdiff
|
tree
2007-02-25
D
a
vid Hil
v
ert
Revise argument
handli
n
g for ip-wl
arg
u
m
e
nts
.
commit
|
commitdiff
|
tree
2007-02-25
David
Hilvert
Implement Irani-P
e
le
g
weight limits, and set a d
e
f
a
ul
t
.
.
.
commit
|
commitdiff
|
tree
2007-02-25
David Hilvert
Updat
e
C
h
angelog
commit
|
commitdiff
|
tree
2007-02-25
D
a
v
id
H
il
v
er
t
Add an
i
ncremental renderer mean i
n
variant weight-limited
.
.
.
commit
|
commitdiff
|
tree
2007-02-24
Dav
i
d Hilvert
d2::filter::
s
c
aled_filter::filter_ch
a
nn
e
l(): Slightly
.
.
.
commit
|
commitdiff
|
tree
2007-02-24
David Hilvert
Update
c
h
angelog
commit
|
commitdiff
|
tree
2007-02-24
David Hilve
r
t
d2::imag
e
::defi
n
ed_sc
a
le_
b
y_half():
Replace incorrect
.
.
.
commit
|
commitdiff
|
tree
2007-02-24
David Hilvert
d2::i
m
age::d
e
fine
d
_scale_by_half(): Use geome
t
ric mean
.
.
.
commit
|
commitdiff
|
tree
2007-02-17
D
av
i
d Hilvert
d2/filte
r
/scale
d
_filt
e
r
.
h:
Clean up recently
a
dded
.
.
.
commit
|
commitdiff
|
tree
2007-02-17
David H
i
lvert
d2/
f
ilter/scaled_filter
.
h: Revise certa
i
nty
c
alculations
.
.
.
commit
|
commitdiff
|
tree
2007-02-17
David
H
ilvert
NEWS: add 0
.
8
.
6 rel
e
a
s
e
i
nformation
commit
|
commitdiff
|
tree
2007-02-17
David Hi
l
vert
Updat
e
changelog for 0
.
8
.
6 release
d
ate
.
commit
|
commitdiff
|
tree
2007-02-17
David Hilvert
doc: Rename 'localhost' sub
d
irectory t
o
more relev
a
nt
.
.
.
commit
|
commitdiff
|
tree
2007-02-17
Dav
i
d H
i
lvert
boo
t
s
t
ra
p
: Remove code t
o
p
r
une docu
m
entat
i
o
n
commit
|
commitdiff
|
tree
2007-02-15
David Hilv
e
rt
Upda
t
e version number to 0
.
8
.
6
commit
|
commitdiff
|
tree
2007-02-15
Davi
d
Hilv
e
r
t
ui/input
.
h
:
Upda
t
e gnulib header 'strndup
.
h' --> 's
t
ring_
.
h'
.
commit
|
commitdiff
|
tree
2007-02-15
Dav
i
d
Hilvert
Allow more
f
lexib
i
lity in the return v
a
lue of
i
sinf()
.
commit
|
commitdiff
|
tree
2007-02-14
D
avid
H
ilvert
Update changelo
g
commit
|
commitdiff
|
tree
2007-02-14
David Hilvert
d2/align
.
h: Ad
d
a
n alter
n
ate
c
od
e
path in th
e
case
.
.
.
commit
|
commitdiff
|
tree
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