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ui: Indicate when no local alignment details are available.
2007-04-15
David Hilver
t
ui
:
Indicate when n
o
l
ocal alignment details are available
.
commit
|
commitdiff
|
tree
2007-04-14
Da
v
id
Hilver
t
d2
:
:
trans_multi::specific_res
c
ale(): Ad
d
an assert
.
.
.
commit
|
commitdiff
|
tree
2007-04-13
David
H
ilve
r
t
Beg
i
n implementin
g
d2:
:
align::cal
c
ulate_element_
r
egion()
.
commit
|
commitdiff
|
tree
2007-04-13
Dav
i
d Hilvert
d
2
::align::_ali
g
n()
:
A
d
d
code to store
t
o and retrieve
.
.
.
commit
|
commitdiff
|
tree
2007-04-09
Dav
i
d Hilvert
Add code to recalculate eac
h
non-tr
i
vial non-primary
.
.
.
commit
|
commitdiff
|
tree
2007-04-09
David H
i
lvert
Add
l
ocal_a
x
_count
to t
h
e list
of pa
r
ameters
t
a
ke
n
.
.
.
commit
|
commitdiff
|
tree
2007-04-09
Davi
d
Hilver
t
Change b
a
rrel distortion mu
l
tiplier
a
nd
r
ate of cha
n
ge
.
.
.
commit
|
commitdiff
|
tree
2007-04-08
David Hil
v
ert
Add methods d2:
:
a
l
ign::make_elem
e
nt_n
o
ntr
i
vial(), d2
.
.
.
commit
|
commitdiff
|
tree
2007-04-03
David
H
ilvert
d2::
a
l
ign::follow():
R
ev
e
rt l
o
opi
n
g
o
ver o
l
d_* element
.
.
.
commit
|
commitdiff
|
tree
2007-04-03
David
H
ilvert
d2::align::
f
ollow(): Upd
a
te element
i
ndices
of all
.
.
.
commit
|
commitdiff
|
tree
2007-04-03
David Hilv
e
r
t
d
2::tfile: B
u
g
fix
i
n handli
n
g of no
n
-prim
a
r
y
elements
.
commit
|
commitdiff
|
tree
2007-04-03
Davi
d
Hilvert
Copy
r
ight notice updates
.
commit
|
commitdiff
|
tree
2007-04-03
Dav
i
d
Hilve
r
t
A
dd code for loading and sav
i
n
g non-primary alig
n
ment
.
.
.
commit
|
commitdiff
|
tree
2007-04-03
David H
i
lvert
Update changelog
.
commit
|
commitdiff
|
tree
2007-04-03
David
H
ilvert
u
i
:
Modify match fo
r
mat strings to pr
o
vide c
o
n
s
ta
n
t
.
.
.
commit
|
commitdiff
|
tree
2007-04-03
D
a
vid
Hilvert
ui
_
tty: Add
field width and p
r
ecisi
o
n specifiers
t
o
.
.
.
commit
|
commitdiff
|
tree
2007-04-03
David Hi
l
vert
Swap argument
s
to alignment
s
tatus s
o
t
h
at freq
u
e
nt
.
.
.
commit
|
commitdiff
|
tree
2007-04-03
David Hilvert
ui_tty: Change
floating
point formats
from %f t
o
%g
.
.
.
commit
|
commitdiff
|
tree
2007-04-03
David Hilvert
d2
:
:align: Move following logic from _align() to a
.
.
.
commit
|
commitdiff
|
tree
2007-04-02
David H
i
lver
t
Update changelog
commit
|
commitdiff
|
tree
2007-04-02
David Hilvert
R
emove file '
s
gauss
.
h
' missing fr
o
m sg
a
u
ss p
a
tch, as
.
.
.
commit
|
commitdiff
|
tree
2007-04-02
D
avid
Hilve
r
t
A
dd
missi
n
g f
i
le from earlie
r
sgauss patch
.
Will be
.
.
.
commit
|
commitdiff
|
tree
2007-04-02
David Hilve
r
t
Update ch
a
n
g
elog
commit
|
commitdiff
|
tree
2007-04-02
David Hilvert
Update changelo
g
commit
|
commitdiff
|
tree
2007-04-02
D
avid
Hilvert
Move
t
he multi-tran
s
fo
r
mat
i
on
ele
m
ent swit
c
hing loop
.
.
.
commit
|
commitdiff
|
tree
2007-04-02
David Hilve
r
t
U
pdate Chan
g
elog
commit
|
commitdiff
|
tree
2007-04-02
D
a
vid H
i
l
v
e
rt
d2/align
.
h:
Recal
c
ulate diff statistics after increasi
n
g
.
.
.
commit
|
commitdiff
|
tree
2007-04-01
David Hi
l
vert
Modify handling of --i
d
entity in d2::align so that
.
.
.
commit
|
commitdiff
|
tree
2007-04-01
David
H
ilvert
Add
methods f
o
r enabling and disabling restric
t
ed support
.
.
.
commit
|
commitdiff
|
tree
2007-04-01
David Hilve
r
t
Add check for transformation support to d2::alig
n
:
.
.
.
commit
|
commitdiff
|
tree
2007-04-01
David Hilvert
d2::trans_
m
ulti
:
A
dd method supported
(
) to ch
e
ck for
.
.
.
commit
|
commitdiff
|
tree
2007-03-29
David Hilvert
Begin usi
n
g non-trivi
a
l multi-t
r
a
n
sformations in d2
.
.
.
commit
|
commitdiff
|
tree
2007-03-29
D
av
i
d Hilvert
d2::trans_multi: Add get_element(
)
method
.
commit
|
commitdiff
|
tree
2007-03-27
D
avid
Hilvert
d
2
::ren
d
e
r::ip
c
: Modi
f
y allocation for subdomain arguments
.
.
.
commit
|
commitdiff
|
tree
2007-03-24
Davi
d
H
i
lver
t
d2::
a
lign:
A
lloca
t
e kept_t with
n
e
w[] rat
h
er t
h
an mal
l
oc
.
.
.
commit
|
commitdiff
|
tree
2007-03-23
Dav
i
d Hilvert
Modify spe
c
ific_*() calls
in d2::trans_multi to ca
l
l
.
.
.
commit
|
commitdiff
|
tree
2007-03-23
David Hilver
t
Al
l
ocate d2::incremental::subdomain_args w
i
th new[
.
.
.
commit
|
commitdiff
|
tree
2007-03-23
David Hilver
t
Resolve certain
c
o
mpila
t
ion and run-time fail
u
res
.
commit
|
commitdiff
|
tree
2007-03-23
David Hilvert
d2
:
:trans_mul
t
i: Update
methods for a
t
ri
v
i
al multi
.
.
.
commit
|
commitdiff
|
tree
2007-03-23
Davi
d
H
i
lvert
Initial version of d2/tr
a
ns_multi
.
h, taken
from the
.
.
.
commit
|
commitdiff
|
tree
2007-03-23
David Hi
l
ve
r
t
A
dd file
d
2/
t
rans_single
.
h
for implementing single
.
.
.
commit
|
commitdiff
|
tree
2007-03-21
David H
i
lvert
M
ove single-transformation class specifics f
r
o
m d
2
.
.
.
commit
|
commitdiff
|
tree
2007-03-17
Davi
d
Hilve
r
t
d2/trans_a
b
s
t
ract
.
h: Initi
a
l i
m
plementation
o
f an abstract
.
.
.
commit
|
commitdiff
|
tree
2007-03-17
David H
i
lvert
d2/tfile
.
h: Call ungetc() when
test for
non-p
r
imar
y
.
.
.
commit
|
commitdiff
|
tree
2007-03-15
D
a
vid
H
ilvert
Revise
handlin
g
of MA elements
.
commit
|
commitdiff
|
tree
2007-03-15
David H
i
lvert
M
o
dify -
-
m
a
-ca
r
d to range [1,inf) and add code
to it
e
r
at
e
.
.
.
commit
|
commitdiff
|
tree
2007-03-14
Davi
d
Hilv
e
rt
Add
f
l
a
gs to d2::align::element_t and d2:;tf
i
l
e to
.
.
.
commit
|
commitdiff
|
tree
2007-03-14
David Hi
l
ve
r
t
ui/ui_tty
.
h: Revise update(
)
and updat
e
_loop() so t
h
at
.
.
.
commit
|
commitdiff
|
tree
2007-03-13
David Hilvert
ui/ui_tty
.
h: Add a UI upda
t
e thread
.
commit
|
commitdiff
|
tree
2007-03-13
David
Hilvert
d2::align
:
expand and rename the data str
u
cture f
o
r
.
.
.
commit
|
commitdiff
|
tree
2007-03-13
David
H
ilvert
d2
:
:align: Make a
s
tructure for
f
oll
o
w semantics vari
a
bles
.
.
.
commit
|
commitdiff
|
tree
2007-03-12
David
H
ilvert
Ad
d
op
t
ion
handling for --ma-card
and
-
-
m
a-co
n
t multi
.
.
.
commit
|
commitdiff
|
tree
2007-03-10
David
Hilvert
Update ch
a
ngelog
commit
|
commitdiff
|
tree
2007-03-10
David Hilvert
U
pdate h
e
lp text to reflect new file
-
scoped options
.
commit
|
commitdiff
|
tree
2007-03-10
David Hil
v
ert
Allow file-scoped --gs and --gs-mo
commit
|
commitdiff
|
tree
2007-03-09
David H
i
lve
r
t
Update changelog
commit
|
commitdiff
|
tree
2007-03-09
Da
v
i
d
Hilvert
Ignore fex r
e
g
i
o
ns when ne
x
is specified
.
commit
|
commitdiff
|
tree
2007-03-09
David Hil
v
e
rt
Update
changelog
commit
|
commitdiff
|
tree
2007-03-09
David
Hilve
r
t
Add --blac
k
option for s
e
tting black level
.
commit
|
commitdiff
|
tree
2007-03-08
David H
i
lv
e
rt
Add opt
i
on --ev for setting exposur
e
v
a
lue meta-d
a
ta
.
commit
|
commitdiff
|
tree
2007-03-08
David Hilvert
Disabl
e
implication for
-
-exp-register when --c
x
is
.
.
.
commit
|
commitdiff
|
tree
2007-03-07
David Hil
v
ert
Modify
profile local a
l
ignment detail output
t
o omit
.
.
.
commit
|
commitdiff
|
tree
2007-03-07
David Hil
v
ert
U
p
date cha
n
gelog
commit
|
commitdiff
|
tree
2007-03-07
David
Hilvert
Update prof
i
ling
timers
to include timi
n
g
d
etail
s
for
.
.
.
commit
|
commitdiff
|
tree
2007-03-07
Dav
i
d Hilver
t
d
2
/pp
m
.
h: U
p
d
a
te erro
r
message for n
o
n-PPM files to
.
.
.
commit
|
commitdiff
|
tree
2007-03-04
Davi
d
Hilvert
U
pdate NEWS a
n
d version numbers for 0
.
8
.
7 rel
e
a
s
e
.
commit
|
commitdiff
|
tree
2007-03-03
David
Hilvert
Update cha
n
gel
o
g
.
commit
|
commitdiff
|
tree
2007-03-03
David Hilvert
Make --ip-nowl de
f
a
ult
.
commit
|
commitdiff
|
tree
2007-02-25
D
a
vid Hilvert
Update chang
e
log
.
commit
|
commitdiff
|
tree
2007-02-25
David Hilvert
Revise argumen
t
handling f
o
r ip
-
wl arguments
.
commit
|
commitdiff
|
tree
2007-02-25
David
Hi
l
vert
Implement Irani-Peleg weight limi
t
s, and se
t
a def
a
u
l
t
.
.
.
commit
|
commitdiff
|
tree
2007-02-25
David
Hilve
r
t
Update Changelo
g
commit
|
commitdiff
|
tree
2007-02-25
David Hilvert
Add
an incremental
renderer mean inv
a
r
iant
w
eight-limited
.
.
.
commit
|
commitdiff
|
tree
2007-02-24
David H
i
lvert
d2:
:
filt
e
r::s
c
aled_filter::filter_channel(): S
l
ightly
.
.
.
commit
|
commitdiff
|
tree
2007-02-24
David Hilvert
Update c
h
angelog
commit
|
commitdiff
|
tree
2007-02-24
David Hilvert
d2::
i
ma
g
e::defin
e
d
_
s
cale_b
y
_half()
:
Replace incorrect
.
.
.
commit
|
commitdiff
|
tree
2007-02-24
D
avid
Hilvert
d2::imag
e
:
:
defi
n
ed_scale_by_half()
:
Use geometric mean
.
.
.
commit
|
commitdiff
|
tree
2007-02-17
Dav
i
d
H
il
v
ert
d2
/
filter/scaled_filter
.
h:
C
lean up rece
n
tly a
d
ded
.
.
.
commit
|
commitdiff
|
tree
2007-02-17
David
H
i
l
vert
d
2/fi
l
ter/sca
l
ed_filter
.
h: Revise certainty calculat
i
ons
.
.
.
commit
|
commitdiff
|
tree
2007-02-17
D
a
vid Hilvert
NEWS: add 0
.
8
.
6 rel
e
as
e
information
commit
|
commitdiff
|
tree
2007-02-17
David
Hilve
r
t
Update ch
a
ngelog
f
or 0
.
8
.
6 release date
.
commit
|
commitdiff
|
tree
2007-02-17
David Hilve
r
t
do
c
: Rename 'localhost'
subdirec
t
ory to more relevant
.
.
.
commit
|
commitdiff
|
tree
2007-02-17
D
avid Hilvert
bootstrap: Re
m
ov
e
code to prune documentation
commit
|
commitdiff
|
tree
2007-02-15
David
Hilve
r
t
Update version nu
m
b
e
r to 0
.
8
.
6
commit
|
commitdiff
|
tree
2007-02-15
David Hilvert
ui/input
.
h: Update gnul
i
b header 'st
r
n
dup
.
h' --> 'st
r
i
n
g_
.
h
'
.
commit
|
commitdiff
|
tree
2007-02-15
Davi
d
H
ilvert
Allo
w
more fle
x
i
bi
l
ity
i
n t
h
e return val
u
e of isinf()
.
commit
|
commitdiff
|
tree
2007-02-14
David Hilvert
U
p
da
t
e changelo
g
commit
|
commitdiff
|
tree
2007-02-14
David Hilvert
d2/align
.
h: A
d
d an alt
e
r
nate code path in the
case
.
.
.
commit
|
commitdiff
|
tree
2007-02-14
D
a
v
i
d Hilvert
d2::transformation::
{
eu_ro
t
ate_about_sca
l
ed,scaled_inverse_t
.
.
.
commit
|
commitdiff
|
tree
2007-02-14
D
a
vid Hilvert
Update
c
han
g
e
l
og
commit
|
commitdiff
|
tree
2007-02-14
David Hilv
e
r
t
d2::point::{ne
g
,
p
os}inf
(
): Modify assert
i
on
s
to allow
.
.
.
commit
|
commitdiff
|
tree
2007-02-13
David Hil
v
ert
Mod
i
f
y changelog
e
ntry on default setti
n
gs c
h
anges
.
.
.
commit
|
commitdiff
|
tree
2007-02-13
David Hil
v
ert
d2/rende
r
/
i
pc
.
h: Add checks for fin
i
te
n
ess
t
o
e
xposure
.
.
.
commit
|
commitdiff
|
tree
2007-02-13
David H
i
lvert
d2/render/ipc
.
h: Adj
u
st the cc_floor d
o
wnward
s
, so
.
.
.
commit
|
commitdiff
|
tree
2007-02-13
Da
v
id Hi
l
vert
Update changelog
.
commit
|
commitdiff
|
tree
2007-02-13
Da
v
i
d
Hilvert
d
2/render/ipc
.
h: Enable
e
xposure adjustment in Iran
i
.
.
.
commit
|
commitdiff
|
tree
2007-02-13
David Hilvert
d2/image
.
h:
Re-enab
l
e disabled certainty
c
alculation
.
commit
|
commitdiff
|
tree
2007-02-13
D
a
vid Hilvert
Update changelog; re-en
a
ble certa
i
nty-weight
e
d ali
g
nment
.
commit
|
commitdiff
|
tree
2007-02-13
D
a
vid H
i
l
v
e
rt
Adjust
weight threshold for defined pi
x
els to acc
o
unt
.
.
.
commit
|
commitdiff
|
tree
2007-02-13
Dav
i
d Hil
v
ert
Re
s
tore ce
r
tainty-weighted
incremental renderi
n
g
,
using
.
.
.
commit
|
commitdiff
|
tree
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