stash: add t3906 for submodule updates

stash: add t3906 for submodule updates

Test that the stash apply command updates the work tree as expected for
changes which don't result in conflicts. To make that work add a helper
function that uses read-tree to apply the changes of the target commit
to the work tree, then stashes these changes and at last applies that
stash.

Implement the KNOWN_FAILURE_STASH_DOES_IGNORE_SUBMODULE_CHANGES switch
and reuse two other already present switches to expect the known
failure that stash does ignore submodule changes.

Signed-off-by: Jens Lehmann <Jens.Lehmann@web.de>
Signed-off-by: Junio C Hamano <gitster@pobox.com>