fix #105 - find the real "first orf"
commit9fb341c333b6b532308ebb4f2feef5a90382aab7
authorMark A. Jensen <maj@fortinbras.us>
Thu, 19 Mar 2015 00:03:43 +0000 (18 20:03 -0400)
committerMark A. Jensen <maj@fortinbras.us>
Thu, 19 Mar 2015 00:03:43 +0000 (18 20:03 -0400)
tree5b2631c79950963d64d2375f7d0e06c17cebc97e
parent557d24ed48cf1c30bbee3c09d61d708ff791c501
fix #105 - find the real "first orf"

Update Bio::PrimarySeqI::_find_orfs_nucleotide so that
translate(-orf => 1) performs as advertised when there
are multiple overlapping ORFs. Add relevant tests to
t/Seq/PrimarySeq.t.
Bio/PrimarySeqI.pm
t/Seq/PrimarySeq.t