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Merge pull request #4919 from solgenomics/topic/gpcp_tool
7 days ago
David Waring
Tr
i
al Folde
r
: set breeding progra
m
for fold
e
rs of typ
e
.
.
.
commit
|
commitdiff
|
tree
7 days ago
D
a
vi
d
Warin
g
Geo Field Map: ad
d
loading banner wh
e
n
l
o
a
ding plots
.
.
.
commit
|
commitdiff
|
tree
7 days ago
Davi
d
Waring
Geo Fie
l
d Map: Hide r
e
gular field
m
ap
leg
e
nd
for
g
eo
.
.
.
commit
|
commitdiff
|
tree
7 days ago
Dav
i
d Waring
G
e
o
F
ield Map
:
add v
i
ewO
n
ly m
o
d
e
that disab
l
es editin
g
.
.
.
commit
|
commitdiff
|
tree
7 days ago
David Waring
Ge
o
F
i
eld Map: al
l
ow
m
issing plots, display missi
n
g
.
.
.
commit
|
commitdiff
|
tree
2024-04-24
David Warin
g
Direct Phenotypi
n
g Page: add spinner and checkma
r
k
.
.
.
commit
|
commitdiff
|
tree
2024-04-24
David W
a
ring
Ph
e
notype Raw Da
t
a: i
n
creas
e
p
ageSize of BrAPI GET
.
.
.
commit
|
commitdiff
|
tree
2024-04-24
David Waring
Plot
O
rder
D
o
wnload: f
i
x conte
n
t-dispos
i
t
io
n
header
commit
|
commitdiff
|
tree
2024-04-22
Dav
i
d Wari
n
g
Fieldbook tra
i
t file
generator:
r
emov
e
debugg
i
ng ale
r
t
commit
|
commitdiff
|
tree
2024-04-04
Dav
i
d
W
ari
n
g
Create
Seedlots from Trial: fix bug if no trait data
commit
|
commitdiff
|
tree
2024-03-21
David Wari
n
g
Download Arc
h
i
ved VCF:
a
dd
.
vcf extensi
o
n to dow
n
load
.
.
.
commit
|
commitdiff
|
tree
2024-03-20
Davi
d
Wari
n
g
Download Archived VCF
:
improve t
e
st
and vcf ch
e
ck
commit
|
commitdiff
|
tree
2024-03-20
David Wari
n
g
D
ownload Archived VCF:
t
r
a
n
spose file
b
e
fore downloading
commit
|
commitdiff
|
tree
2024-03-20
D
a
vid
W
aring
Tests: Add ac
c
essio
n
upload append/replace s
y
nonym
.
.
.
commit
|
commitdiff
|
tree
2024-03-20
Dav
i
d W
a
ring
Accession Upload: trim
w
hit
e
s
p
a
c
e fro
m
sy
n
onyms t
o
.
.
.
commit
|
commitdiff
|
tree
2024-03-18
David W
a
ring
Accession Upload: ad
d
optio
n
to ei
t
her append
o
r
r
eplace
.
.
.
commit
|
commitdiff
|
tree
2024-03-18
David Waring
BrAP
I
ObservatioUnits: fix miss
i
ng 0 tr
a
i
t values in
.
.
.
commit
|
commitdiff
|
tree
2024-03-15
David Waring
BrAPI Ob
s
ervations: inc
l
ude trait value
s
of 0
commit
|
commitdiff
|
tree
2024-03-14
David Waring
Archiv
e
d VCF Download: add tests
commit
|
commitdiff
|
tree
2024-03-14
D
avid
Waring
AJAX: gen
o
typing_projec
t
_has_archiv
e
d
_
vcf - m
a
k
e sur
e
.
.
.
commit
|
commitdiff
|
tree
2024-03-14
David War
i
ng
S
e
arch Wizard: Update archived vcf de
s
cription
commit
|
commitdiff
|
tree
2024-03-11
David Waring
C
r
eate Seedl
o
ts
f
rom Trial: add pl
o
t_n
a
me as va
r
iable
.
.
.
commit
|
commitdiff
|
tree
2024-03-11
Da
v
id
W
a
ring
R
e
move git metadata files
commit
|
commitdiff
|
tree
2024-03-11
David
W
arin
g
M
e
rge branch 'master
'
into
'top
i
c/
g
enotype_archived_vc
f
'
commit
|
commitdiff
|
tree
2024-03-08
David Warin
g
Geo Field
M
ap: A
d
d
instructions above map
commit
|
commitdiff
|
tree
2024-03-08
David Waring
Geo Field
M
a
p
: UI
fee
d
back when loading
and
sav
i
ng
commit
|
commitdiff
|
tree
2024-03-08
David Warin
g
Geo
Field Map:
s
end all observat
i
on
u
nits at once
commit
|
commitdiff
|
tree
2024-03-01
David Waring
Geo Field M
a
p
:
require aut
h
token fo
r
up
d
ate
commit
|
commitdiff
|
tree
2024-02-29
David W
a
ring
G
eo Field
M
ap: Add b
a
ck d3 imp
o
rt
commit
|
commitdiff
|
tree
2024-02-16
David
W
a
r
ing
Search
W
izard: Archive
d
VCF Downlo
a
d
section
commit
|
commitdiff
|
tree
2024-02-14
D
a
vi
d
Waring
Archived VCF: Add se
c
t
ion to
genotype project d
e
tail
.
.
.
commit
|
commitdiff
|
tree
2024-02-14
Da
v
id W
a
ring
A
r
chived VCF
:
Include a
l
l files with
o
ption to
limit
.
.
.
commit
|
commitdiff
|
tree
2024-02-14
David Wari
n
g
Arc
h
ived VCF: Add AJAX Endpo
i
nt
commit
|
commitdiff
|
tree
2024-02-08
David Waring
Tests: fix
sto
c
k
d
e
tail
test
commit
|
commitdiff
|
tree
2024-02-07
David Wari
n
g
Merge branch ma
s
ter in
t
o
topic/phenotyp
e
_heatmap_multipl
e
_
t
r
i
als
commit
|
commitdiff
|
tree
2024-02-07
D
a
vid Waring
Pedi
g
ree
V
iewer: tr
i
gger render if outer sectio
n
collapse
d
commit
|
commitdiff
|
tree
2024-01-09
David W
a
ring
Fie
l
dma
p
:
Display
phenotyp
e
h
e
a
t
m
ap for
m
ultiple tr
i
als
commit
|
commitdiff
|
tree
2024-01-09
David
Waring
Update P
h
enotype
Spreadsheet Template I
n
formation
commit
|
commitdiff
|
tree
2023-12-18
Dav
i
d Waring
Simp
l
e Phe
n
otyp
e
U
p
lo
a
d: allow
s
ubplot_name
an
d
plant
_
na
m
e
commit
|
commitdiff
|
tree
2023-12-18
David Waring
S
i
mple
Phenotype Upload: alternate column header
commit
|
commitdiff
|
tree
2023-12-12
David Waring
Legacy v
3
o
f
D3
commit
|
commitdiff
|
tree
2023-12-12
Da
v
id War
i
ng
F
i
eldmap: re
i
mplemen
t
d
3
r
e
b
i
nd
commit
|
commitdiff
|
tree
2023-12-11
David Waring
Plot Ord
e
r
Download: t
o
ggle harvestmast
e
r row
/
r
an
g
e
.
.
.
commit
|
commitdiff
|
tree
2023-12-11
David Waring
Plot Order Download: simpl
i
fy downlo
a
d
func
t
ion
commit
|
commitdiff
|
tree
2023-12-05
David Waring
Label Designer: support Public
L
i
st
s
for sorting by
.
.
.
commit
|
commitdiff
|
tree
2023-12-05
D
av
i
d
Waring
CXGN::List exists_list
-
r
e
t
urn info fo
r
p
ub
l
i
c
lists
commit
|
commitdiff
|
tree
2023-12-05
D
a
vid Waring
Trial Layout Downl
o
ad: a
d
d
r
ep, block, and contr
o
l
.
.
.
commit
|
commitdiff
|
tree
2023-11-30
David Wari
n
g
Seedlot Upload: Ad
d
name check to Seed
l
ot Harvested
.
.
.
commit
|
commitdiff
|
tree
2023-11-28
D
a
vid Waring
Seed
l
ot Upload
:
che
c
k if name al
r
eady
exis
t
s as any
.
.
.
commit
|
commitdiff
|
tree
2023-11-27
D
avid Waring
F
i
eld Map
Plot Order Downl
o
a
d
:
A
dd Ha
r
vest
M
a
s
ter format
commit
|
commitdiff
|
tree
2023-11-14
David Waring
Trial Layout: display error mess
a
ge
s
f
r
om layout download
commit
|
commitdiff
|
tree
2023-11-13
David Wa
r
i
ng
D
B Patc
h
: fix ha
r
d
-coded cvterm id
commit
|
commitdiff
|
tree
2023-11-10
D
av
i
d
Waring
D
ownl
o
ad
S
pa
t
ial Layout: fix offse
t
plot positio
n
i
n
g
commit
|
commitdiff
|
tree
2023-11-10
Da
v
id Waring
DB Patch: Up
d
ate P
h
enoty
p
e JSONB Mat V
i
ew
commit
|
commitdiff
|
tree
2023-11-09
David Waring
L
a
bel Designer: Sort labels by plo
t
l
a
yout orde
r
commit
|
commitdiff
|
tree
2023-11-08
D
a
vid
Waring
Trial Layout: only display plo
t
or
d
er do
w
nload section
.
.
.
commit
|
commitdiff
|
tree
2023-11-08
Da
v
id War
i
ng
Plot Sorting: add op
t
ion to include gaps / missing
.
.
.
commit
|
commitdiff
|
tree
2023-11-07
David War
i
ng
P
l
ot
S
ort
i
ng: add s
u
pport for including border plots
commit
|
commitdiff
|
tree
2023-11-02
David Waring
Trial L
a
yout: down
l
o
a
d plot or
d
er us
i
ng new backend
.
.
.
commit
|
commitdiff
|
tree
2023-11-02
David Waring
P
lot Sorting: mov
e
f
u
nction
t
o C
X
GN::Trial class
commit
|
commitdiff
|
tree
2023-11-02
David W
a
ring
Plot Orde
r
in
g
: add addit
i
onal fields
commit
|
commitdiff
|
tree
2023-10-31
David
Wari
n
g
[
W
I
P] Trial: backe
n
d function
fo
r
order
i
ng plots
commit
|
commitdiff
|
tree
2023-10-31
D
a
v
i
d
Waring
Field Map: update UI
for plot order down
l
oad
commit
|
commitdiff
|
tree
2023-10-31
David
Warin
g
L
abel D
e
s
igne
r
: Add UI for trial layout
s
orting
commit
|
commitdiff
|
tree
2023-10-30
David Waring
Label Desi
g
ner: Move sort
i
n
g options
to
main
p
age
commit
|
commitdiff
|
tree
2023-10-02
D
avid Waring
M
ech Test: Update Labe
l
Desig
n
test
commit
|
commitdiff
|
tree
2023-10-02
David Warin
g
Manual: add updates to
l
abel desi
g
ner page
commit
|
commitdiff
|
tree
2023-09-28
David Wa
r
i
n
g
L
abel De
s
igner: s
o
rt by
i
t
e
m DB I
D
as last
o
p
t
i
o
n
commit
|
commitdiff
|
tree
2023-09-25
David Waring
Label Design
Selenium Test: fix
d
at
a
s
o
urce s
e
lect
.
.
.
commit
|
commitdiff
|
tree
2023-09-25
Dav
i
d Wari
n
g
Label
D
es
i
gn Test:
fix sort order
p
ropert
y
commit
|
commitdiff
|
tree
2023-09-22
D
a
vid Waring
M
erge
b
ranc
h
'master
'
into to
p
ic/label_
d
esigner_
i
mprovements
commit
|
commitdiff
|
tree
2023-09-11
David Wa
r
ing
Add P
e
d
i
gree: stop processing
i
f
error encounte
r
ed
commit
|
commitdiff
|
tree
2023-08-16
David Waring
Do
c
s: Add info about m
u
l
t
i-trial fi
e
ld
map
commit
|
commitdiff
|
tree
2023-08-16
D
avid Waring
F
ield
Map: add color to
l
ege
n
d of
linked
trials
commit
|
commitdiff
|
tree
2023-08-11
Da
v
id
W
ari
n
g
F
ield M
a
p:
hi
d
e multi-trial la
b
el
o
n
overlapp
i
ng plots
commit
|
commitdiff
|
tree
2023-08-10
David Wari
n
g
Field
Map: toggle display of option
to show
t
rials
.
.
.
commit
|
commitdiff
|
tree
2023-08-10
David Waring
F
ield Map: color code mult
i
ple tr
i
als
commit
|
commitdiff
|
tree
2023-08-10
David W
a
r
ing
T
r
ial Layo
u
t: get trials from sam
e
field
commit
|
commitdiff
|
tree
2023-08-10
Davi
d
Waring
Location: ad
d
Tow
n
type
commit
|
commitdiff
|
tree
2023-07-26
David Waring
Label
D
esi
g
ner: Add ac
c
ession
p
edigree property
commit
|
commitdiff
|
tree
2023-07-26
Da
v
i
d
Wari
n
g
Label
Designer: get longe
s
t fields
f
r
om all
l
ist
items
commit
|
commitdiff
|
tree
2023-07-26
David W
a
ring
Label Desig
n
er:
Add seedl
o
t contents
pedigree
p
rop
e
rty
commit
|
commitdiff
|
tree
2023-07-16
David
W
ari
n
g
Accessi
o
n Uploa
d
: remove encodi
n
g
of text/html r
e
spons
e
commit
|
commitdiff
|
tree
2023-07-14
Da
v
i
d W
a
ri
n
g
Access
i
on Up
l
oad: verify accessions f
i
le charac
t
e
r
.
.
.
commit
|
commitdiff
|
tree
2023-06-27
D
a
vi
d
Wari
n
g
Down
l
o
a
d Pedigrees: make optio
n
s clea
r
er
commit
|
commitdiff
|
tree
2023-06-26
David W
a
ring
Up
d
a
te Downlo
a
dPedigrees Mec
h
test
commit
|
commitdiff
|
tree
2023-06-23
David Waring
Pedigree Download: show working dialog w
h
ile
processing
commit
|
commitdiff
|
tree
2023-06-23
Dav
i
d Warin
g
Pedigree Download: add optio
n
to in
c
l
u
de
d
escendants
commit
|
commitdiff
|
tree
2023-06-23
David Waring
CXGN::Stock::get_
p
edigree_rows - rem
o
v
e duplicate rows
commit
|
commitdiff
|
tree
2023-06-23
David Wa
r
ing
P
edi
g
r
e
e Download: Add
H
eliu
m
Format
commit
|
commitdiff
|
tree
2023-06-20
Davi
d
Waring
Label
D
esigner: Allow multi
p
le sort by multiple prope
r
ties
commit
|
commitdiff
|
tree
2023-06-07
D
avid Wari
n
g
Label Designer: Field options
commit
|
commitdiff
|
tree
2023-06-07
D
a
vid Wari
n
g
Lab
e
l Designer: Allow multip
l
e trial
s
commit
|
commitdiff
|
tree
2023-06-06
Da
v
i
d
W
a
ring
L
abel Desi
g
ner: Add sourc
e
d
a
ta type se
l
ect box
commit
|
commitdiff
|
tree
2023-05-09
D
a
vid Waring
Fix c
o
mment
commit
|
commitdiff
|
tree
2023-05-09
Dav
i
d Wa
r
in
g
Byp
a
ss login
requirement on
password reset
p
a
g
e
commit
|
commitdiff
|
tree
2023-04-26
D
a
vid Warin
g
Mer
g
e S
t
ock
s
: e
r
ror han
d
ling
commit
|
commitdiff
|
tree
2023-03-21
D
a
vid Waring
Observation Upload: a
d
d possible
t
rait matc
h
e
s to the
.
.
.
commit
|
commitdiff
|
tree
2023-03-17
D
avid Waring
Trait Valid
a
tio
n
: add conf f
l
ag to check
composable
.
.
.
commit
|
commitdiff
|
tree
2023-03-14
David Waring
Tr
a
i
t
Validation:
trim whitespace from
t
rait name
commit
|
commitdiff
|
tree
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