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Add SIMD for AWH
2017-11-19
Berk Hess
Ad
d
SIM
D
fo
r
AWH
commit
|
commitdiff
|
tree
2017-11-18
Magnus Lundborg
Added Magnus
Lundb
o
rg as co
n
t
r
ibutor i
n
t
h
e
manual
.
commit
|
commitdiff
|
tree
2017-11-18
Aleksei Iupinov
Asynchronous
C
UDA transfers are asserted
t
o
always
.
.
.
commit
|
commitdiff
|
tree
2017-11-10
Roland
S
c
hulz
Revert "
U
se -mavx2 -mfma inste
a
d of -ma
r
ch with AVX2"
commit
|
commitdiff
|
tree
2017-11-08
Roland Sch
u
lz
Fix scalar blend
commit
|
commitdiff
|
tree
2017-11-08
Magnus Lund
b
org
Update
to
TNG v 1
.
8
.
1
commit
|
commitdiff
|
tree
2017-09-09
Berk Hess
A
v
oid in
f
in
S
IMD
double
sqrt()
commit
|
commitdiff
|
tree
2017-07-19
M
a
rk Ab
r
a
ham
Improve CMake implementation for GMX
_
S
IM
D
commit
|
commitdiff
|
tree
2017-06-29
Teemu Murto
l
a
Generalize
I
Fo
r
ceProvi
d
er
commit
|
commitdiff
|
tree
2017-06-15
Sz
i
l
á
rd Páll
A
l
low d
i
s
a
bling th
e
explici
t
use
of CUDA textures
commit
|
commitdiff
|
tree
2017-06-14
Mark
A
braham
Si
m
pl
i
fy reporting from ini
t
_gpu
commit
|
commitdiff
|
tree
2017-06-13
Er
i
k Lindahl
More quo
t
es
commit
|
commitdiff
|
tree
2017-06-07
Vedran M
i
letić
Document floating-po
i
nt arith
m
e
tic
commit
|
commitdiff
|
tree
2017-05-29
S
zilárd Páll
Quo
t
es are
c
ool,
t
yp
o
-free on
e
s are
e
ven
"
cooler"
commit
|
commitdiff
|
tree
2017-05-27
Mark Abraham
Quotes fro
m
G
o
tti
n
gen worksho
p
commit
|
commitdiff
|
tree
2017-05-14
Be
r
k Hess
Fi
x
bugs i
n
d
ouble Simd4 implemen
t
ations
commit
|
commitdiff
|
tree
2017-03-19
Erik Lindahl
Use OpenMP up to 16 th
r
eads w
i
th AMD
Ryzen
commit
|
commitdiff
|
tree
2017-03-19
Erik Lindahl
128-bit AVX2 SIMD
f
or AM
D
Ry
z
en
commit
|
commitdiff
|
tree
2017-03-19
Mar
k
Abr
a
h
am
F
i
x s
t
ring
h
andling f
o
r gcc 7
commit
|
commitdiff
|
tree
2017-03-14
Erik Lindahl
Fix gcc
compiles of A
V
X-512 SIMD
commit
|
commitdiff
|
tree
2017-02-14
Mark Abraham
Fix handling of previous vi
r
ial
s
commit
|
commitdiff
|
tree
2017-02-10
Roland Schulz
R
e
mov
e
duplic
a
te AVX
5
12 gather definitions
commit
|
commitdiff
|
tree
2017-02-09
M
ark Ab
r
aham
Remov
e
EST_DI
S
T
R
fr
o
m state
.
h
commit
|
commitdiff
|
tree
2017-02-09
Mark Abraham
Enhance
warninp
commit
|
commitdiff
|
tree
2017-02-08
Ro
l
and Schulz
AVX512: Use
d
oub
l
e-sized
g
ather
f
or
p
airs
o
f
floats
commit
|
commitdiff
|
tree
2017-02-07
Mar
k
A
b
raham
Introdu
c
ed system
prepara
t
ion
s
ection to user
g
uide
commit
|
commitdiff
|
tree
2017-02-03
Dav
i
d van der Spoel
F
ixes SEGV i
n
gmx order
.
commit
|
commitdiff
|
tree
2017-01-11
Roland Schulz
Tid
y
: modern
i
ze-use-
n
ullptr
commit
|
commitdiff
|
tree
2016-11-03
Roland Sc
h
ulz
S
u
press
I
CC 1
6
on Win
d
ows false postives
commit
|
commitdiff
|
tree
2016-10-30
Te
e
mu Murtola
S
upport normalizing v
a
lues
in KeyValueT
r
ee
commit
|
commitdiff
|
tree
2016-10-30
Roland Schulz
Re
p
lace qsort/bsearch with std::sort/low
e
r_bo
u
nd
commit
|
commitdiff
|
tree
2016-10-11
Mark Abraham
Update
f
o
r
FFTW
3
.
3
.
5
commit
|
commitdiff
|
tree
2016-09-26
David
van
d
er Spo
e
l
Fixes i
s
s
u
e
w
ith Release bu
i
ld in correlation
functi
o
ns
.
commit
|
commitdiff
|
tree
2016-09-18
Roland S
c
hulz
Fix math-te
s
t
false posit
i
ve
commit
|
commitdiff
|
tree
2016-09-18
Roland Schulz
Better
o
ptimized ICC release flags
commit
|
commitdiff
|
tree
2016-09-12
Mark
A
braham
P
r
eliminary clean up of N
V
ML code
commit
|
commitdiff
|
tree
2016-09-12
Berk Hess
Add
const to thread-MPI
f
unc
t
ion
s
commit
|
commitdiff
|
tree
2016-09-12
Vedran Mi
l
etić
Document wa
l
lcycle c
o
u
nte
r
s and subco
u
n
t
ers
commit
|
commitdiff
|
tree
2016-09-12
Teemu M
u
rtola
Fix variou
s
memory leaks
commit
|
commitdiff
|
tree
2016-07-31
James Gr
a
ha
m
A
void blan
k
line in writing index
file
commit
|
commitdiff
|
tree
2016-07-30
Roland Schulz
Update GCC
v
ers
i
on for refer
e
nce build
commit
|
commitdiff
|
tree
2016-07-30
Vedra
n
Mil
e
t
i
ć
D
o
c
u
ment
g
mx_cgsort_t and gmx_domdec_so
r
t_t structs
commit
|
commitdiff
|
tree
2016-07-08
Erik Linda
h
l
Update
a
ffinit
y
che
c
king for Inte
l
compiler
commit
|
commitdiff
|
tree
2016-07-08
Szil
á
rd Páll
Add
P
DF metadata to the manual
commit
|
commitdiff
|
tree
2016-07-07
Erik L
i
ndahl
Red
u
ce hwloc &
c
puid test requir
e
ments
commit
|
commitdiff
|
tree
2016-07-07
Teemu Murtol
a
Change handling
f
or miss
i
ng relen
g
doc
s
commit
|
commitdiff
|
tree
2016-07-07
Szilárd Páll
Add user guide info
o
n C
U
DA
a
pplication clocks
commit
|
commitdiff
|
tree
2016-07-07
Mark Ab
r
aham
Fix build if
l
i
b
c
u
da is found b
u
t nvcc i
s
not
commit
|
commitdiff
|
tree
2016-06-07
Semen Yesylev
s
kyy
Added manu
a
l sectio
n
about e
m
bedding protein
s
to me
m
branes
.
commit
|
commitdiff
|
tree
2016-06-05
S
z
ilárd Páll
A
dd support for CUDA CC 6
.
0/6
.
1
commit
|
commitdiff
|
tree
2016-06-03
B
e
rk Hess
H
an
d
le part
i
all
y
f
roze
n
an
d
constrained
a
toms
commit
|
commitdiff
|
tree
2016-06-02
Szilárd Páll
Add env
.
va
r
.
to
e
nable OpenCL caching
commit
|
commitdiff
|
tree
2016-06-02
S
z
il
á
r
d Páll
Fi
x
Op
e
nCL binary
cache file name ge
n
eration
commit
|
commitdiff
|
tree
2016-06-02
Rolan
d
Schulz
Fix ICC 16u3
b
uild
commit
|
commitdiff
|
tree
2016-06-02
Patr
i
c
k
W
e
l
c
he
En
s
u
re IM
D
incl
u
de dependenci
e
s work
commit
|
commitdiff
|
tree
2016-05-29
Ma
r
k Abraham
Si
m
plified and updated Ope
n
CL compila
t
ion
commit
|
commitdiff
|
tree
2016-05-08
Berk Hess
U
p
dat
e
mdrun
t
er
m
i
n
at
i
o
n info
commit
|
commitdiff
|
tree
2016-04-03
Berk Hess
Correct
nrdf
for 1D/2D systems
commit
|
commitdiff
|
tree
2015-09-30
Roland Sch
u
lz
Require C++11
commit
|
commitdiff
|
tree
2015-08-13
M
ar
k
Abraham
Re-e
n
able mul
t
i-GP
U
support
in
OpenCL
for
t
h
read MPI
commit
|
commitdiff
|
tree
2015-07-05
B
e
r
k Hess
Fix DD
D
LB
sta
t
e issue
commit
|
commitdiff
|
tree