validate: reorg code preparing for pr filter, saturation
commit8e9a03196b859364b5a90b49a3a15c49b2f8eba9
authorMichael Coleman <tutufan@gmail.com>
Wed, 23 Apr 2008 02:39:18 +0000 (22 21:39 -0500)
committerMichael Coleman <mkc@stowers-institute.org>
Thu, 24 Apr 2008 18:09:32 +0000 (24 13:09 -0500)
treeb1614f862c50fae8d5ded4db55c77cbeb854d461
parent650e71c6defa6127879146ad30ee434727c8a870
validate: reorg code preparing for pr filter, saturation

add --adjust-fdr option

This version is (mostly) functionally the same as previous, but the code has
been reorganized so that other features may be added.

add peptide and mass fields to --list-peptides output
zap ".sqt" from --list-peptides output
zap short options for destructive operations
greylag_validate.py