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WBCommandExts.t: Fixed a pending TODO related to
2014-09-01 Francisco J. OssandonWBCommandExts.t: Fixed a pending TODO related to
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2014-08-22 Francisco J. OssandonRemoved empty file Bio/Tools/Run/hmmer3.pm, which seems
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2014-07-31 Francisco J. OssandonMerge branch 'master' of https://github.com/bioperl...
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2014-05-16 Francisco J. OssandonMerge pull request #71 from nathanweeks/issue/bio-seqfeature...
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2014-05-08 Francisco J. OssandonMerge pull request #67 from stu2/master
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2014-05-08 Francisco J. OssandonMerge pull request #68 from tsibley/readline-return...
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2014-04-30 Francisco J. OssandonRemoteBlast_rpsblast.t: Fixed a few number of skipped...
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2014-04-29 Francisco J. OssandonRemoteBlast.t: Fixed several number of skipped tests,
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2014-03-27 Francisco J. OssandonMerge pull request #66 from nathanweeks/sqlite_collate_nocase
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2014-02-28 Francisco J. OssandonMassive check of file open lines. Changed bareword...
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2014-02-25 Francisco J. OssandonMerge pull request #65 from MartinMcGrath/master
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2014-01-28 Francisco J. OssandonMerge pull request #63 from yschensandiego/patch-1
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2014-01-28 Francisco J. OssandonMerge pull request #64 from yschensandiego/patch-2
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2013-12-31 Francisco J. OssandonCommandExts: My mistake, double-quotes in exe path...
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2013-12-30 Francisco J. OssandonStandAloneBlast & CommandExts: Apply double-quotes on
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2013-12-28 Francisco J. OssandonI'm not sure if these programs will run on Windows now
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2013-12-27 Francisco J. OssandonWindows use 'NUL' instead of '/dev/null', so added...
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2013-12-27 Francisco J. OssandonAdded a way to find the required files in Windows using...
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2013-12-27 Francisco J. OssandonHmmer: Prevent errors caused by the presence of whitespace
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2013-12-27 Francisco J. OssandonBowtie.t: "qx/ulimit -n 3>&-/" does not work as intended...
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2013-12-19 Francisco J. OssandonChanged "cat" to "find" to be used as an example of
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2013-12-19 Francisco J. OssandonRemoteBlast.t: Increased a little the delay between...
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2013-12-14 Francisco J. OssandonAssemblerBase.pm: In "reset_parameters", added an intermedia...
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2013-12-13 Francisco J. OssandonBWA.t, Bowtie.t, Maq.t & Samtools.t: Moved tests using
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2013-12-13 Francisco J. OssandonAnalysisFactory_soap.t & Analysis_soap.t: Changed tests...
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2013-12-12 Francisco J. OssandonBuild.PL & MYMETA.json: Added SOAP::Lite v0.716 in
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2013-12-12 Francisco J. OssandonSoapEU-function.t: Updated expected version of a genome...
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2013-12-11 Francisco J. OssandonStandAloneBlastPlus.pm: Some temporal files were not...
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2013-12-11 Francisco J. OssandonSABlastPlus.t: Added an additional $fac->cleanup for
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2013-12-11 Francisco J. OssandonSABlastPlus.t: Some bl2seq tests were giving hits even...
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2013-12-11 Francisco J. OssandonVista.t: The 'java Vista 2>&1' command to determine...
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2013-12-11 Francisco J. OssandonFastTree.t & Neighbor.t: Fixed number of skipped tests...
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2013-12-11 Francisco J. OssandonBEDTools.t: Moved the file-finding lines inside the...
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2013-12-11 Francisco J. OssandonBlat.t: Fixed skipped tests number and removed "$blat_present",
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2013-12-11 Francisco J. OssandonHyphy/BatchFile.pm: Changed @validvals[$i] to $validvals...
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2013-12-11 Francisco J. OssandonMAFFT.pm: Fixed an uninitialized warning from
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2013-11-20 Francisco J. OssandonMerge pull request #54 from fjossandon/master
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2013-11-08 Francisco J. OssandonMerge remote branch 'upstream/master' into test
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2013-09-22 Francisco J. OssandonMerge remote branch 'upstream/master' into test
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2013-09-17 Francisco J. OssandonMerge remote branch 'upstream/master' into test
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2013-04-18 Francisco J. OssandonMerge remote branch 'upstream/master'
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2013-04-15 Francisco J. OssandonMerge remote branch 'upstream/master'
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BioPerl wrappers