repo.or.cz
/
bioperl-live.git
/
search
commit
grep
author
committer
pickaxe
?
search:
re
summary
|
log
|
graphiclog1
|
graphiclog2
|
commit
|
commitdiff
|
tree
|
refs
|
edit
|
fork
first
·
prev
·
next
Corrected, all SearchIO tests pass
2013-07-16
Brian
O
sborne
Corrected, all Sear
c
hIO tests pass
commit
|
commitdiff
|
tree
2013-07-16
Brian Osborne
Back this o
u
t, related tests are
f
ailing
commit
|
commitdiff
|
tree
2013-07-16
Brian Osborne
Ad
d
stra
n
d() so nhm
m
e
r can get strand data
commit
|
commitdiff
|
tree
2013-07-16
Brian Osb
o
r
n
e
Add part
i
al
s
upport
for n
h
m
mer (
v
ersion 3
.
1
)
commit
|
commitdiff
|
tree
2013-03-31
B
r
ian Osborne
Bug 34
1
5
commit
|
commitdiff
|
tree
2013-03-28
Brian Os
b
o
r
n
e
Merge br
a
nch 'master'
o
f
github
.
com:biop
e
rl/bioperl
.
.
.
commit
|
commitdiff
|
tree
2013-03-28
Brian Osborne
Add dna_
t
o_aa_aln method and test
s
commit
|
commitdiff
|
tree
2013-03-26
B
r
ian Osb
o
r
n
e
Merge
b
ranch '
m
aster' of github
.
com:bioper
l
/bioperl
.
.
.
commit
|
commitdiff
|
tree
2013-03-26
Brian
O
s
b
o
r
n
e
A
d
d s
u
pport for version 4, all tests pass
commit
|
commitdiff
|
tree
2013-03-08
Brian Osborne
Merge
branch 'ma
s
ter' of github
.
com:bioperl/bioperl
.
.
.
commit
|
commitdiff
|
tree
2013-03-08
Brian
O
sborne
Bio::Al
i
gnIO::fasta was no
t
al
w
ays using />\s*(
\
S+
.
.
.
commit
|
commitdiff
|
tree
2013-01-06
Brian Osborne
Update, correct
commit
|
commitdiff
|
tree
2013-01-05
B
r
ian Os
b
orne
Tid
y
and correct do
c
s
commit
|
commitdiff
|
tree
2012-02-29
B
r
ian O
s
borne
Fix typos
commit
|
commitdiff
|
tree
2012-02-28
Brian Osborne
Remove No
d
e fr
o
m '
u
se base
'
, it's u
n
necessary
commit
|
commitdiff
|
tree
2012-02-22
B
r
i
a
n
Osb
o
rne
N
o
des need the ne
w
() me
t
hod
commit
|
commitdiff
|
tree
2012-02-02
B
rian Osborn
e
Clarify the P
O
D a bit
commit
|
commitdiff
|
tree
2012-02-02
B
r
ian Osborne
Doc ex
a
mp
l
e
commit
|
commitdiff
|
tree
2012-02-02
Brian
O
sborne
Typos
commit
|
commitdiff
|
tree
2012-01-23
Brian Osbor
n
e
M
e
rge branch 'ma
s
ter'
o
f github
.
c
om:
b
i
o
perl/bioperl
.
.
.
commit
|
commitdiff
|
tree
2012-01-23
Brian Osborne
Cr
e
ate a
u
nique using
t
he perce
n
t
commit
|
commitdiff
|
tree
2011-12-09
B
rian Osborne
Merge bra
n
ch 'ma
s
ter' o
f
github
.
com:
b
ioperl/bio
p
erl
.
.
.
commit
|
commitdiff
|
tree
2011-11-25
Brian Osbo
r
ne
Mer
g
e
branch
'
m
aster' of gith
u
b
.
com:b
i
o
p
erl/bioperl
.
.
.
commit
|
commitdiff
|
tree
2011-11-14
Brian Osborne
M
e
rge
b
ranch 'maste
r
' of github
.
com:bio
p
erl
/
bioperl
.
.
.
commit
|
commitdiff
|
tree
2011-10-10
Brian Osborne
Merge branch 'master' of gith
u
b
.
com:bi
o
p
erl/bioperl
.
.
.
commit
|
commitdiff
|
tree
2011-10-07
Brian
O
s
borne
Fix hsp_l
e
ngth(), it was returning twice the length
.
.
.
commit
|
commitdiff
|
tree
2011-09-21
Brian
Osbo
r
ne
POD fixes
commit
|
commitdiff
|
tree
2011-09-20
Brian Osbor
n
e
POD fixes
commit
|
commitdiff
|
tree
2011-09-20
Brian Osborne
Ad
d
s
ome example URLs, wi
l
l add a tes
t
wh
e
n
C
UTG cor
r
e
c
t
s
.
.
.
commit
|
commitdiff
|
tree
2011-09-06
Brian
Osborne
Merge branch 'master' of github
.
c
om:bi
o
p
erl/b
i
o
p
erl
.
.
.
commit
|
commitdiff
|
tree
2011-09-06
Bri
a
n Osborne
Ty
p
o
commit
|
commitdiff
|
tree
2011-08-25
B
rian
Osborne
Comment
o
ut
l
ines
i
n FTHe
l
per t
h
a
t
con
v
er
t
specif
i
c
.
.
.
commit
|
commitdiff
|
tree
2011-07-05
Brian Os
b
orne
Mi
n
or edits to docs
commit
|
commitdiff
|
tree
2011-07-03
Br
i
an Osborne
Stockholm
.
pm did not work, fixed now
.
Add
t
es
t
s
.
Mak
e
.
.
.
commit
|
commitdiff
|
tree
2011-07-01
Brian Osborne
Add
test for RPS-BLAST a
l
g
o
ri
t
hm
commit
|
commitdiff
|
tree
2011-06-24
Brian Osborne
M
e
rge branch 'mast
e
r' of gith
u
b
.
com:bioperl
/
b
ioperl
.
.
.
commit
|
commitdiff
|
tree
2011-06-24
Brian Os
b
o
rne
D
o
n'
t
restrict
j
ust t
o
C
D
S features, the feat
u
r
e
may
.
.
.
commit
|
commitdiff
|
tree
2011-06-22
B
rian O
s
borne
Merge branch 'master' of github
.
com:bioperl/biope
r
l
.
.
.
commit
|
commitdiff
|
tree
2011-06-22
Brian Osborne
Implement writ
e
_feature() in FeatureIO::ptt
commit
|
commitdiff
|
tree