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Add dna_to_aa_aln method and tests
2013-03-28
Brian Osbo
r
ne
Add
d
n
a
_to_aa_aln m
e
thod
and te
s
ts
commit
|
commitdiff
|
tree
2013-03-26
Brian Os
b
orne
M
erge
br
a
nch
'master'
of gi
t
hub
.
com
:
bioperl/bio
p
er
l
.
.
.
commit
|
commitdiff
|
tree
2013-03-26
B
r
ian
O
sborne
A
dd
s
upp
o
rt for
v
er
s
ion 4, all t
e
sts pass
commit
|
commitdiff
|
tree
2013-03-08
Bri
a
n O
s
b
o
rne
Merge
branch '
m
aste
r
'
of github
.
com:bioperl/bioperl
.
.
.
commit
|
commitdiff
|
tree
2013-03-08
Bri
a
n
O
s
borne
Bio::AlignIO:
:
fasta was not always us
i
ng />\s*(
\
S
+
.
.
.
commit
|
commitdiff
|
tree
2013-01-06
Bria
n
Osborne
Up
d
ate,
c
orrect
commit
|
commitdiff
|
tree
2013-01-05
Brian Osborne
Tidy an
d
correct docs
commit
|
commitdiff
|
tree
2012-02-29
B
rian Osborne
Fi
x
t
ypos
commit
|
commitdiff
|
tree
2012-02-28
Brian Osb
o
rn
e
Remov
e
Node fr
o
m
'
use ba
s
e', it's unnecessary
commit
|
commitdiff
|
tree
2012-02-22
Brian Osborne
Nodes need the
new() m
e
thod
commit
|
commitdiff
|
tree
2012-02-02
Brian
O
sbo
r
ne
Clarify the P
O
D a bit
commit
|
commitdiff
|
tree
2012-02-02
Brian
Osbo
r
n
e
Doc
e
xample
commit
|
commitdiff
|
tree
2012-02-02
B
r
ian O
s
bo
r
n
e
T
y
pos
commit
|
commitdiff
|
tree
2012-01-23
Brian Osborne
M
e
r
g
e
branch 'master' of gith
u
b
.
c
om:
b
ioperl/
b
io
p
erl
.
.
.
commit
|
commitdiff
|
tree
2012-01-23
Brian
Osbo
r
ne
Create a unique
u
s
i
n
g
t
h
e
p
er
c
ent
commit
|
commitdiff
|
tree
2011-12-09
Br
i
an Osborne
Merge
b
ra
n
ch
'
master
'
of
githu
b
.
com
:
b
iope
r
l
/bioperl
.
.
.
commit
|
commitdiff
|
tree
2011-11-25
Brian Osb
o
rne
Mer
g
e branch 'master' of github
.
com:bi
o
perl/b
i
o
perl
.
.
.
commit
|
commitdiff
|
tree
2011-11-14
B
r
ian Osborn
e
Merge br
a
n
c
h
'
ma
s
ter' of github
.
c
om:bio
p
erl
/
b
ioperl
.
.
.
commit
|
commitdiff
|
tree
2011-10-10
B
r
ian Osborne
Merge
branch 'master'
o
f
gi
t
hub
.
c
o
m:bioperl/b
i
operl
.
.
.
commit
|
commitdiff
|
tree
2011-10-07
Bria
n
Osborne
Fi
x
hsp_length(), it
was
r
eturn
i
ng t
w
ice th
e
length
.
.
.
commit
|
commitdiff
|
tree
2011-09-21
Brian Osb
o
rne
POD f
i
xes
commit
|
commitdiff
|
tree
2011-09-20
Brian Osbor
n
e
POD fixe
s
commit
|
commitdiff
|
tree
2011-09-20
Br
i
an Osborn
e
Add some examp
l
e URLs, will
add a test when
C
UTG corrects
.
.
.
commit
|
commitdiff
|
tree
2011-09-06
B
r
ian Osborne
Merge branch 'master' of github
.
com:bioperl/b
i
operl
.
.
.
commit
|
commitdiff
|
tree
2011-09-06
Brian Osbo
r
ne
Typo
commit
|
commitdiff
|
tree
2011-08-25
Brian Osborne
C
o
mment out lin
e
s
in
F
T
Helper that convert specific
.
.
.
commit
|
commitdiff
|
tree
2011-07-05
Brian Osborne
Minor edits to docs
commit
|
commitdiff
|
tree
2011-07-03
Brian Osborn
e
Stockholm
.
pm did not w
o
rk,
f
i
xed now
.
A
dd tests
.
Make
.
.
.
commit
|
commitdiff
|
tree
2011-07-01
B
r
ian Osborne
A
d
d
te
s
t for RPS-BLAST
a
lgorithm
commit
|
commitdiff
|
tree
2011-06-24
Brian Osborne
Merg
e
branc
h
'master' of
github
.
com:biope
r
l
/bioperl
.
.
.
commit
|
commitdiff
|
tree
2011-06-24
Brian Osbor
n
e
Don't res
t
rict just t
o
CDS fea
t
ur
e
s, th
e
fea
t
ure
m
ay
.
.
.
commit
|
commitdiff
|
tree
2011-06-22
Brian
O
sborne
Merg
e
branch 'master' o
f
github
.
com:bioperl/bioperl
.
.
.
commit
|
commitdiff
|
tree
2011-06-22
Brian Osborne
Implement write_featu
r
e() in Feature
I
O::ptt
commit
|
commitdiff
|
tree
2010-05-27
Brian Osborne
R
e
move unused Bio/
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|
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|
tree