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added -online flag, -debug flag
2001-06-21
ja
s
on
added
-o
n
l
ine flag, -debug f
l
ag
commit
|
commitdiff
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tree
2001-06-21
jas
o
n
more detailed d
e
bugging output
commit
|
commitdiff
|
tree
2001-06-21
jason
han
d
le adding
d
uplic
a
te markers b
e
t
ter
commit
|
commitdiff
|
tree
2001-06-21
jas
o
n
work for genemap9
9
now
commit
|
commitdiff
|
tree
2001-06-21
jason
nam
e
d
key
s
and corrected name of map
commit
|
commitdiff
|
tree
2001-06-20
j
a
son
c
r
uft begone!
commit
|
commitdiff
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tree
2001-06-20
jason
remov
e
cru
f
t
commit
|
commitdiff
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tree
2001-06-20
jaso
n
automagic downloading o
f
all
t
he necessary
d
ata sets
.
.
.
commit
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commitdiff
|
tree
2001-06-20
jason
added m
u
c
ho comm
e
n
ts and
d
e
s
cr
i
ptions
ab
o
ut the different
.
.
.
commit
|
commitdiff
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tree
2001-06-19
jason
initial commi
t
of script to l
o
ad ge
n
e
t
hon markers
a
nd
.
.
.
commit
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commitdiff
|
tree
2001-06-19
j
a
son
update
al
g
c
orrection
commit
|
commitdiff
|
tree
2001-06-19
j
a
son
m
o
re tests for
m
arkers, finding b
y
p
rimers
commit
|
commitdiff
|
tree
2001-06-19
jason
handle u
p
dates b
e
tt
e
r and allow searching
b
y
prim
e
r
s
commit
|
commitdiff
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tree
2001-06-19
jason
hand
l
e upda
t
es and
a
uto-
f
ind m
a
rkers b
a
sed
on pri
m
er
s
commit
|
commitdiff
|
tree
2001-06-19
jas
o
n
proper
perl 5
.
6
.
0 syntax for arrays
commit
|
commitdiff
|
tree
2001-06-19
jas
o
n
c
o
d
e
c
l
eanup to cal
l
g
et_next_ma
r
ker properly
commit
|
commitdiff
|
tree
2001-06-19
j
as
o
n
code for
g
et_
n
ext_marker
commit
|
commitdiff
|
tree
2001-06-19
jason
cl
e
anup a
f
ter a
populating
t
e
mpo
r
ary table
commit
|
commitdiff
|
tree
2001-06-19
jason
test
s
for get_mar
k
ers_for
_
r
egio
n
and get_
n
ext_marker
commit
|
commitdiff
|
tree
2001-06-19
jason
proper array test -
e
rrant
'
,'
commit
|
commitdiff
|
tree
2001-06-19
jason
upda
t
ed to re
f
lect schema changes
commit
|
commitdiff
|
tree
2001-06-19
jason
initia
l
scr
i
pt to load whitehead s
t
s ma
r
k
e
rs
commit
|
commitdiff
|
tree
2001-06-19
jason
bug cle
a
nup
commit
|
commitdiff
|
tree
2001-06-19
jason
more tests for
m
ar
k
er ob
j
ect
commit
|
commitdiff
|
tree
2001-06-19
jason
h
and
l
e n
e
w
name of sql f
i
le
commit
|
commitdiff
|
tree
2001-06-19
jason
rem
o
ve old version
commit
|
commitdiff
|
tree
2001-06-19
jason
let's go ahe
a
d and
l
a
bel this with db specific name
commit
|
commitdiff
|
tree
2001-06-19
jaso
n
alias
e
s are associated with
src
r
ather than a map
commit
|
commitdiff
|
tree
2001-06-18
ja
s
on
miss
i
ng t
commit
|
commitdiff
|
tree
2001-06-18
jason
wa
r
n
no
t
c
h
rom, bad
ty
p
o
commit
|
commitdiff
|
tree
2001-06-18
jason
added
i
nitial mode
l
of the
m
aps o
b
j
e
cts
,
Li
n
c
o
ln to
.
.
.
commit
|
commitdiff
|
tree
2001-06-13
jason
a
l
lo
w
pcrpr
i
m
e
r
s/length to
be null so
t
h
a
t we
c
an st
o
re
.
.
.
commit
|
commitdiff
|
tree
2001-06-13
jason
s
m
arted script only r
e
ads
in huge STS file
commit
|
commitdiff
|
tree
2001-06-13
jason
suppor
t
for
w
riting ePCR dbs from mysqldb
commit
|
commitdiff
|
tree
2001-06-13
jason
pr
o
tect field l
o
ok
u
p
b
etter
in '
u
pda
t
e' mode
commit
|
commitdiff
|
tree
2001-06-13
j
a
s
on
added a debu
g
g
i
ng met
h
od to_st
r
ing
commit
|
commitdiff
|
tree
2001-06-13
jason
A
P
I change from get_Map/Marker to
g
e
t
commit
|
commitdiff
|
tree
2001-06-13
jaso
n
updated
t
est
s
to use correct API
commit
|
commitdiff
|
tree
2001-06-13
jason
script to import m
a
rshfie
l
d map
commit
|
commitdiff
|
tree
2001-06-09
j
a
son
perl 5
.
00
5
03 compliance
commit
|
commitdiff
|
tree
2001-06-08
jason
Chro
m
len
g
th for a m
a
p queriable
commit
|
commitdiff
|
tree
2001-06-08
j
aso
n
adaptors work more c
o
rrectl
y
now
commit
|
commitdiff
|
tree
2001-06-08
jason
allow dy
n
a
m
ic sel
e
ction of wh
i
ch dbs we will test
commit
|
commitdiff
|
tree
2001-06-06
j
ason
marker
ad
a
ptor and map ada
p
tor
started, not function
a
l
commit
|
commitdiff
|
tree
2001-06-06
jason
minor
tweaks
commit
|
commitdiff
|
tree
2001-06-04
jason
removing ensembllite cruft
commit
|
commitdiff
|
tree
2001-04-16
j
a
son
clea
n
u
p
create
d
gb tempfil
e
commit
|
commitdiff
|
tree
2001-04-16
j
a
son
added mis
s
ing swis
s
.
dat a
n
d an
e
xample con
f
s
c
ript
commit
|
commitdiff
|
tree
2000-07-27
ja
s
o
n
revised to handle new ensembl schema
commit
|
commitdiff
|
tree
2000-07-27
j
a
son
ac
c
o
unted for new en
s
embl sch
e
ma
commit
|
commitdiff
|
tree
2000-07-27
jason
ad
d
ed TODO file
commit
|
commitdiff
|
tree
2000-07-27
jason
e
nsembl-lit
e
n
o
w really w
o
rks with
an
en
s
emb
l
db with
.
.
.
commit
|
commitdiff
|
tree
2000-07-14
jason
comme
n
t
e
d
#'s
commit
|
commitdiff
|
tree
2000-07-14
jas
o
n
remove shoul
d
w
or
k
now
commit
|
commitdiff
|
tree
2000-07-14
jason
initial
E
nsem
b
llite commit
commit
|
commitdiff
|
tree
2000-07-11
jason
initial sql commit
commit
|
commitdiff
|
tree
2000-07-11
jason
initial commit
commit
|
commitdiff
|
tree